Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0066s0082 Marchantia polymorpha HOM05D005646 ORTHO05D006828 0.0e+00 1135.2 644 100.0
Pp3c21_7940 Physcomitrium patens HOM05D005646 ORTHO05D006828 7.9e-102 375.6 543 45.5
AagrBONN_evm.TU.Sc2ySwM_228.261 Anthoceros agrestis HOM05D005646 ORTHO05D006828 1.9e-95 354.4 581 42.2
SEGI_25656 Sequoiadendron giganteum HOM05D005646 ORTHO05D006828 3.4e-89 333.6 399 47.1
Carub.0004s2080 Capsella rubella HOM05D005646 ORTHO05D006828 2.2e-72 277.7 291 54.3
SMO145G0178 Selaginella moellendorffii HOM05D005646 ORTHO05D006828 5.0e-72 276.6 289 50.9
THA.LOC104824183 Tarenaya hassleriana HOM05D005646 ORTHO05D006828 5.5e-71 273.1 315 49.8
SalBow5G2332 Salvia bowleyana HOM05D005646 ORTHO05D006828 2.7e-70 270.8 291 52.9
Sp4g21170 Schrenkiella parvula HOM05D005646 ORTHO05D006828 2.7e-70 270.8 293 53.2
Sed0017230 Sechium edule HOM05D005646 ORTHO05D006828 4.7e-70 270.0 295 49.8
C03p25580 Brassica napus HOM05D005646 ORTHO05D006828 6.1e-70 269.6 293 52.6
Dinv32048 Davidia involucrata HOM05D005646 ORTHO05D006828 8.0e-70 269.2 311 48.6
Manes.11G002900 Manihot esculenta HOM05D005646 ORTHO05D006828 1.8e-69 268.1 303 51.2
AL4G36080 Arabidopsis lyrata HOM05D005646 ORTHO05D006828 2.3e-69 267.7 293 51.9
ClCG01G007660 Citrullus lanatus HOM05D005646 ORTHO05D006828 3.0e-69 267.3 295 49.8
Gorai.011G293500 Gossypium raimondii HOM05D005646 ORTHO05D006828 3.0e-69 267.3 304 50.0
Aqoxy1G00222 Aquilegia oxysepala HOM05D005646 ORTHO05D006828 3.9e-69 266.9 293 51.5
CsaV3_5G024710 Cucumis sativus L. HOM05D005646 ORTHO05D006828 3.9e-69 266.9 295 50.2
Hma1.2p1_0902F.1_g234850 Hydrangea macrophylla HOM05D005646 ORTHO05D006828 1.5e-68 265.0 294 49.7
Glyma.11G113800 Glycine max HOM05D005646 ORTHO05D006828 2.0e-68 264.6 297 50.8
COL.COLO4_33459 Corchorus olitorius HOM05D005646 ORTHO05D006828 2.6e-68 264.2 303 49.2
MD02G1293900 Malus domestica HOM05D005646 ORTHO05D006828 2.6e-68 264.2 299 48.2
CARHR133490 Cardamine hirsuta HOM05D005646 ORTHO05D006828 3.3e-68 263.8 297 51.2
Duzib128G0351 Durio zibethinus HOM05D005646 ORTHO05D006828 3.3e-68 263.8 302 49.0
arahy.Tifrunner.gnm1.ann1.HJ7TPY Arachis hypogaea HOM05D005646 ORTHO05D006828 5.7e-68 263.1 295 48.5
GSVIVG01000839001 Vitis vinifera HOM05D005646 ORTHO05D006828 5.7e-68 263.1 294 48.3
Migut.B01206 Erythranthe guttata HOM05D005646 ORTHO05D006828 7.4e-68 262.7 459 39.4
A03p21590 Brassica napus HOM05D005646 ORTHO05D006828 9.7e-68 262.3 297 51.5
Lalb_Chr03g0025471 Lupinus albus HOM05D005646 ORTHO05D006828 1.7e-67 261.5 305 47.9
Solyc01g068470.4 Solanum lycopersicum HOM05D005646 ORTHO05D006828 1.7e-67 261.5 418 40.9
Eucgr.J01194 Eucalyptus grandis HOM05D005646 ORTHO05D006828 2.2e-67 261.2 413 41.9
FAN13G1025 Fragaria x ananassa HOM05D005646 ORTHO05D006828 2.2e-67 261.2 313 46.0
FvH4_5g29000 Fragaria vesca HOM05D005646 ORTHO05D006828 2.8e-67 260.8 296 47.3
FAN18G3275 Fragaria x ananassa HOM05D005646 ORTHO05D006828 2.8e-67 260.8 296 47.3
BolC3t14946H Brassica oleracea HOM05D005646 ORTHO05D006828 3.7e-67 260.4 312 50.0
Gohir.D10G253200 Gossypium hirsutum HOM05D005646 ORTHO05D006828 4.8e-67 260.0 428 40.7
Ca_20909_v3 Cicer arietinum L. HOM05D005646 ORTHO05D006828 6.3e-67 259.6 295 47.8
Nitab4.5_0000316g0120 Nicotiana tabacum HOM05D005646 ORTHO05D006828 6.3e-67 259.6 422 40.5
Gohir.A10G241000 Gossypium hirsutum HOM05D005646 ORTHO05D006828 8.2e-67 259.2 304 49.0
Medtr4g071010 Medicago truncatula HOM05D005646 ORTHO05D006828 1.1e-66 258.8 294 49.7
Lj9A646T48 Lonicera japonica HOM05D005646 ORTHO05D006828 1.4e-66 258.5 334 45.2
AT2G38780 Arabidopsis thaliana HOM05D005646 ORTHO05D006828 1.8e-66 258.1 427 44.3
MELO3C005130.2 Cucumis melo HOM05D005646 ORTHO05D006828 2.4e-66 257.7 299 49.2
MBI19_g40603_MAGBIO Magnolia biondii HOM05D005646 ORTHO05D006828 2.4e-66 257.7 299 48.2
CDE08G1053 Ceratophyllum demersum HOM05D005646 ORTHO05D006828 4.1e-66 256.9 310 46.5
Lsat_1_v5_gn_4_30541 Lactuca sativa HOM05D005646 ORTHO05D006828 4.1e-66 256.9 301 47.8
Lj3g0019487 Lotus japonicus HOM05D005646 ORTHO05D006828 4.1e-66 256.9 298 47.7
PGR142G3067 Punica granatum HOM05D005646 ORTHO05D006828 4.1e-66 256.9 301 47.5
QL04p013757 Quercus lobata HOM05D005646 ORTHO05D006828 4.1e-66 256.9 319 45.5
HanXRQChr16g0525351 Helianthus annuus HOM05D005646 ORTHO05D006828 5.3e-66 256.5 326 46.0
EL10Ac2g02850 Beta vulgaris HOM05D005646 ORTHO05D006828 7.0e-66 256.1 290 50.3
ECA234G1046 Erigeron canadensis HOM05D005646 ORTHO05D006828 9.1e-66 255.8 295 47.5
VMungo1127G2196 Vigna mungo HOM05D005646 ORTHO05D006828 9.1e-66 255.8 288 49.7
DCAR_022352 Daucus carota HOM05D005646 ORTHO05D006828 1.2e-65 255.4 303 47.9
RcHm_v2.0_Chr7g0221681 Rosa chinensis HOM05D005646 ORTHO05D006828 1.2e-65 255.4 301 46.2
FAN08G2254 Fragaria x ananassa HOM05D005646 ORTHO05D006828 1.6e-65 255.0 295 46.4
CAN.G1571.4 Capsicum annuum HOM05D005646 ORTHO05D006828 2.0e-65 254.6 295 47.5
BraA03t11395Z Brassica rapa HOM05D005646 ORTHO05D006828 5.9e-65 253.1 316 48.4
TWI63G1320 Tripterygium wilfordii HOM05D005646 ORTHO05D006828 5.9e-65 253.1 319 45.8
Atru.chr11.2464 Acer truncatum HOM05D005646 ORTHO05D006828 7.7e-65 252.7 296 48.3
Ah.10g030810 Amaranthus hybridus HOM05D005646 ORTHO05D006828 7.7e-65 252.7 290 50.0
Cc02_g29140 Coffea canephora HOM05D005646 ORTHO05D006828 7.7e-65 252.7 292 48.6
Aa31LG5G20900 Aethionema arabicum HOM05D005646 ORTHO05D006828 1.7e-64 251.5 343 43.7
Ciclev10031582m.g Citrus clementina HOM05D005646 ORTHO05D006828 1.7e-64 251.5 413 46.2
MSTRG.20533 Avicennia marina HOM05D005646 ORTHO05D006828 2.2e-64 251.1 425 41.2
CSS0034883 Camellia sinensis var. sinensis HOM05D005646 ORTHO05D006828 2.9e-64 250.8 299 48.8
CSS0050243 Camellia sinensis var. sinensis HOM05D005646 ORTHO05D006828 2.9e-64 250.8 299 49.5
CANSAT54G2531 Cannabis sativa HOM05D005646 ORTHO05D006828 8.5e-64 249.2 334 43.4
Sopen01g030430 Solanum pennellii HOM05D005646 ORTHO05D006828 1.5e-63 248.4 450 39.1
SGA_v2.0_scaffold249G44948 Striga asiatica HOM05D005646 ORTHO05D006828 1.9e-63 248.1 344 45.3
Hund13332 Selenicereus undatus HOM05D005646 ORTHO05D006828 2.5e-63 247.7 295 49.2
AUR62032557 Chenopodium quinoa HOM05D005646 ORTHO05D006828 4.2e-63 246.9 296 48.3
Thhalv10016593m.g Eutrema salsugineum HOM05D005646 ORTHO05D006828 4.2e-63 246.9 249 55.4
Thecc.10G006200 Theobroma cacao HOM05D005646 ORTHO05D006828 4.2e-63 246.9 257 53.3
ATR0217G018 Amborella trichopoda HOM05D005646 ORTHO05D006828 5.5e-63 246.5 291 48.1
arahy.Tifrunner.gnm1.ann1.2P0PPD Arachis hypogaea HOM05D005646 ORTHO05D006828 7.2e-63 246.1 281 48.0
TPR.G30507 Trifolium pratense HOM05D005646 ORTHO05D006828 7.2e-63 246.1 302 46.7
Atru.chr11.2492 Acer truncatum HOM05D005646 ORTHO05D006828 9.4e-63 245.7 346 43.1
PSO341G0002 Papaver somniferum HOM05D005646 ORTHO05D006828 1.2e-62 245.4 298 46.3
Potri.001G024200 Populus trichocarpa HOM05D005646 ORTHO05D006828 1.2e-62 245.4 302 47.4
Peaxi162Scf00309g00328 Petunia axillaris HOM05D005646 ORTHO05D006828 2.7e-62 244.2 439 37.6
Actinidia19445 Actinidia chinensis HOM05D005646 ORTHO05D006828 8.0e-62 242.7 323 44.6
AUR62031673 Chenopodium quinoa HOM05D005646 ORTHO05D006828 1.0e-61 242.3 296 49.3
Sabra01G0018200 Salix brachista HOM05D005646 ORTHO05D000112 2.3e-61 241.1 302 46.7
unitig_746.g26627 Utricularia gibba HOM05D005646 ORTHO05D006828 5.2e-61 240.0 291 47.1
Cpa.g.sc197.4 Carica papaya HOM05D005646 ORTHO05D006828 6.8e-61 239.6 246 50.8
Sc17g0003830 Simmondsia chinensis HOM05D005646 ORTHO05D006828 4.4e-60 236.9 309 44.7
Nn7g36491 Nelumbo nucifera HOM05D005646 ORTHO05D006828 3.7e-59 233.8 236 53.4
PSO063G6839 Papaver somniferum HOM05D005646 ORTHO05D006828 6.3e-59 233.0 310 43.9
SalBow5G2661 Salvia bowleyana HOM05D005646 ORTHO05D006828 1.1e-58 232.3 291 49.1
Haze_03084 Corylus avellana HOM05D005646 ORTHO05D006828 2.2e-56 224.6 223 52.9
CiPaw.13G011000 Carya illinoinensis HOM05D005646 ORTHO05D006828 2.9e-56 224.2 499 34.9
Prupe.2G029800 Prunus persica HOM05D005646 ORTHO05D006828 2.7e-54 217.6 294 42.5
Rhsim07G0062900 Rhododendron simsii HOM05D005646 ORTHO05D006828 4.0e-53 213.8 258 46.1
HPP92_001013 Vanilla planifolia HOM05D005646 ORTHO05D006828 5.7e-52 209.9 300 44.0
vmacro13731 Vaccinium macrocarpon HOM05D005646 ORTHO05D006828 1.7e-51 208.4 264 44.7
Nitab4.5_0013777g0020 Nicotiana tabacum HOM05D005646 ORTHO05D006828 5.4e-50 203.4 304 39.5
CBR_g29393 Chara braunii HOM05D005646 ORTHO05D006828 1.8e-42 178.3 540 30.4
Zm00001eb347150 Zea mays HOM05D005646 ORTHO05D006828 2.0e-41 174.9 255 38.0
Phvul.011G041800 Phaseolus vulgaris HOM05D005646 ORTHO05D006828 1.0e-37 162.5 178 48.9
TAR053G0001 Trochodendron aralioides HOM05D005646 ORTHO05D006828 1.4e-37 162.2 296 37.2
Dinv31492 Davidia involucrata HOM05D005646 ORTHO05D006828 6.8e-37 159.8 172 48.8
Psat7g183120 Pisum sativum HOM05D005646 ORTHO05D006828 7.5e-36 156.4 173 46.8
AL4G20430 Arabidopsis lyrata HOM05D005646 ORTHO05D006828 2.2e-35 154.8 265 42.6
Cre13.g607900 Chlamydomonas reinhardtii HOM05D005646 ORTHO05D006828 3.7e-35 154.1 239 38.5
Os05g0381500 Oryza sativa ssp. japonica HOM05D005646 ORTHO05D006828 3.7e-35 154.1 203 42.9
GSVIVG01000664001 Vitis vinifera HOM05D005646 ORTHO05D006828 4.3e-31 140.6 158 48.7
Sc15g0003140 Simmondsia chinensis HOM05D005646 ORTHO05D006828 3.1e-29 134.4 276 35.9
SEGI_07819 Sequoiadendron giganteum HOM05D005646 ORTHO05D006828 6.8e-29 133.3 123 57.7
SEGI_35855 Sequoiadendron giganteum HOM05D005646 ORTHO05D006828 6.8e-29 133.3 123 57.7
PRCOL_00006924 Prasinoderma coloniale HOM05D005646 ORTHO05D006828 8.9e-29 132.9 231 37.2
PGSC0003DMG400000847 Solanum tuberosum HOM05D005646 ORTHO05D006828 2.2e-27 128.3 104 59.6
RcHm_v2.0_Chr4g0400611 Rosa chinensis HOM05D005646 ORTHO05D006828 3.0e-24 117.9 166 42.2
RcHm_v2.0_Chr2g0113191 Rosa chinensis HOM05D005646 ORTHO05D006828 1.9e-23 115.2 201 37.3
Glyma.18G124100 Glycine max HOM05D005646 ORTHO05D006828 2.1e-22 111.7 105 52.4
Glyma.12G039666 Glycine max HOM05D005646 ORTHO05D006828 2.0e-20 105.1 128 46.9
PSO017G4843 Papaver somniferum HOM05D005646 ORTHO05D006828 6.4e-19 100.1 125 45.6
AL4G20290 Arabidopsis lyrata HOM05D005646 ORTHO05D006828 1.1e-18 99.4 123 47.2
RcHm_v2.0_Chr2g0154951 Rosa chinensis HOM05D005646 ORTHO05D006828 7.1e-18 96.7 111 48.6
SalBow1G3971 Salvia bowleyana HOM05D005646 ORTHO05D006828 1.3e-16 92.4 79 60.8
RcHm_v2.0_Chr4g0400621 Rosa chinensis HOM05D005646 ORTHO05D006828 4.4e-12 77.4 88 48.9
MCO02G103 Micromonas commoda HOM05D005646 ORTHO05D006828 7.6e-12 76.6 96 38.5
arahy.Tifrunner.gnm1.ann1.7I4JN8 Arachis hypogaea HOM05D005646 ORTHO05D006828 3.8e-11 74.3 63 57.1
COL.COLO4_25675 Corchorus olitorius HOM05D005646 ORTHO05D006828 7.1e-10 70.1 64 51.6
CBR_g38389 Chara braunii HOM05D005646 ORTHO05D006828 2.1e-09 68.6 142 33.8


User provided reference genes

Program Settings