Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0066s0013 Marchantia polymorpha HOM05D005851 ORTHO05D007137 5.4e-170 600.9 299 100.0
Pp3c10_11850 Physcomitrium patens HOM05D005851 ORTHO05D007137 4.2e-50 202.6 139 68.3
Pp3c12_9510 Physcomitrium patens HOM05D005851 ORTHO05D007137 2.3e-48 196.8 210 52.9
GSVIVG01019923001 Vitis vinifera HOM05D005851 ORTHO05D007137 1.0e-40 171.4 102 74.5
Zm00001eb103020 Zea mays HOM05D005851 ORTHO05D007137 1.0e-40 171.4 103 77.7
AUR62017360 Chenopodium quinoa HOM05D005851 ORTHO05D007137 2.3e-40 170.2 98 78.6
MD06G1068000 Malus domestica HOM05D005851 ORTHO05D007137 3.1e-40 169.9 101 75.2
Os04g0379400 Oryza sativa ssp. japonica HOM05D005851 ORTHO05D007137 3.1e-40 169.9 102 76.5
CsaV3_3G003320 Cucumis sativus L. HOM05D005851 ORTHO05D007137 4.0e-40 169.5 102 72.5
Atru.chr9.1473 Acer truncatum HOM05D005851 ORTHO05D007137 5.2e-40 169.1 100 75.0
FAN13G0774 Fragaria x ananassa HOM05D005851 ORTHO05D007137 6.8e-40 168.7 102 73.5
Peaxi162Scf00620g00019 Petunia axillaris HOM05D005851 ORTHO05D007137 6.8e-40 168.7 102 74.5
RcHm_v2.0_Chr7g0200451 Rosa chinensis HOM05D005851 ORTHO05D007137 6.8e-40 168.7 102 73.5
SalBow1G3546 Salvia bowleyana HOM05D005851 ORTHO05D007137 6.8e-40 168.7 104 72.1
ATR0810G218 Amborella trichopoda HOM05D005851 ORTHO05D007137 8.9e-40 168.3 133 60.2
AUR62010535 Chenopodium quinoa HOM05D005851 ORTHO05D007137 8.9e-40 168.3 98 77.6
HanXRQChr09g0246661 Helianthus annuus HOM05D005851 ORTHO05D007137 8.9e-40 168.3 103 71.8
vmacro00216 Vaccinium macrocarpon HOM05D005851 ORTHO05D007137 8.9e-40 168.3 142 60.6
FvH4_5g00940 Fragaria vesca HOM05D005851 ORTHO05D007137 1.2e-39 167.9 102 73.5
FAN04G1422 Fragaria x ananassa HOM05D005851 ORTHO05D007137 1.2e-39 167.9 102 72.5
SMO364G0744 Selaginella moellendorffii HOM05D005851 ORTHO05D007137 1.2e-39 167.9 105 70.5
Sc01g0009080 Simmondsia chinensis HOM05D005851 ORTHO05D007137 1.2e-39 167.9 98 74.5
MBI12_g34479_MAGBIO Magnolia biondii HOM05D005851 ORTHO05D007137 1.5e-39 167.5 100 74.0
ECA233G5981 Erigeron canadensis HOM05D005851 ORTHO05D007137 2.0e-39 167.2 105 69.5
QL12p015621 Quercus lobata HOM05D005851 ORTHO05D007137 2.0e-39 167.2 101 73.3
Aa31LG6G4910 Aethionema arabicum HOM05D000943 ORTHO05D002475 2.6e-39 166.8 104 73.1
Oeu064711.1 Olea europaea HOM05D005851 ORTHO05D007137 2.6e-39 166.8 102 72.5
TAR629G1703 Trochodendron aralioides HOM05D005851 ORTHO05D007137 2.6e-39 166.8 100 76.0
EL10Ac5g12653 Beta vulgaris HOM05D005851 ORTHO05D007137 3.4e-39 166.4 105 72.4
CAN.G630.46 Capsicum annuum HOM05D005851 ORTHO05D007137 3.4e-39 166.4 110 68.2
Lj2g0003035 Lotus japonicus HOM05D005851 ORTHO05D007137 4.4e-39 166.0 101 72.3
Nitab4.5_0006122g0020 Nicotiana tabacum HOM05D005851 ORTHO05D007137 4.4e-39 166.0 101 72.3
SGA_v2.0_scaffold144G35989 Striga asiatica HOM05D005851 ORTHO05D007137 4.4e-39 166.0 101 72.3
Rhsim05G0172500 Rhododendron simsii HOM05D005851 ORTHO05D007137 5.8e-39 165.6 138 56.5
Solyc08g079680.3 Solanum lycopersicum HOM05D005851 ORTHO05D007137 5.8e-39 165.6 101 72.3
Sopen08g028040 Solanum pennellii HOM05D005851 ORTHO05D007137 5.8e-39 165.6 101 72.3
arahy.Tifrunner.gnm1.ann1.BUTP6K Arachis hypogaea HOM05D005851 ORTHO05D007137 7.5e-39 165.2 101 72.3
arahy.Tifrunner.gnm1.ann1.KEJN3W Arachis hypogaea HOM05D005851 ORTHO05D007137 7.5e-39 165.2 101 72.3
CSS0019536 Camellia sinensis var. sinensis HOM05D005851 ORTHO05D007137 7.5e-39 165.2 143 58.0
Cpa.g.sc29.62 Carica papaya HOM05D005851 ORTHO05D007137 7.5e-39 165.2 101 74.3
Glyma.01G213300 Glycine max HOM05D005851 ORTHO05D007137 7.5e-39 165.2 101 72.3
Nitab4.5_0000439g0090 Nicotiana tabacum HOM05D005851 ORTHO05D007137 7.5e-39 165.2 101 72.3
PGR042G2385 Punica granatum HOM05D005851 ORTHO05D007137 7.5e-39 165.2 101 71.3
THA.LOC104814025 Tarenaya hassleriana HOM05D005851 ORTHO05D007137 9.8e-39 164.9 153 54.2
Actinidia14484 Actinidia chinensis HOM05D005851 ORTHO05D007137 1.3e-38 164.5 100 73.0
AL7G30690 Arabidopsis lyrata HOM05D005851 ORTHO05D007137 1.3e-38 164.5 101 74.3
CDE04G1030 Ceratophyllum demersum HOM05D005851 ORTHO05D007137 1.3e-38 164.5 104 72.1
Cc08_g13500 Coffea canephora HOM05D005851 ORTHO05D007137 1.3e-38 164.5 100 71.0
Hma1.2p1_0367F.1_g137205 Hydrangea macrophylla HOM05D005851 ORTHO05D007137 1.3e-38 164.5 102 71.6
CARHR229860 Cardamine hirsuta HOM05D005851 ORTHO05D007137 1.7e-38 164.1 101 74.3
TPR.G19565 Trifolium pratense HOM05D005851 ORTHO05D007137 1.7e-38 164.1 101 71.3
Sabra01G0087800 Salix brachista HOM05D005851 ORTHO05D007137 2.2e-38 163.7 151 55.6
Medtr5g011460 Medicago truncatula HOM05D005851 ORTHO05D007137 2.9e-38 163.3 100 72.0
PGSC0003DMG400003949 Solanum tuberosum HOM05D005851 ORTHO05D007137 2.9e-38 163.3 101 71.3
TWI60G0484 Tripterygium wilfordii HOM05D005851 ORTHO05D007137 2.9e-38 163.3 100 74.0
AT4G22830 Arabidopsis thaliana HOM05D005851 ORTHO05D007137 3.7e-38 162.9 101 72.3
Thhalv10026321m.g Eutrema salsugineum HOM05D005851 ORTHO05D007137 4.9e-38 162.5 101 71.3
Phvul.002G151800 Phaseolus vulgaris HOM05D005851 ORTHO05D007137 4.9e-38 162.5 153 55.6
Psat2g180400 Pisum sativum HOM05D005851 ORTHO05D007137 4.9e-38 162.5 101 70.3
Potri.001G114800 Populus trichocarpa HOM05D005851 ORTHO05D007137 4.9e-38 162.5 102 71.6
HPP92_025677 Vanilla planifolia HOM05D005851 ORTHO05D007137 4.9e-38 162.5 158 53.8
BcaC09g51070 Brassica carinata HOM05D005851 ORTHO05D007137 6.4e-38 162.2 101 71.3
BcaC09g51071 Brassica carinata HOM05D005851 ORTHO05D007137 6.4e-38 162.2 101 71.3
C01p17300 Brassica napus HOM05D005851 ORTHO05D007137 6.4e-38 162.2 101 71.3
Carub.0007s1844 Capsella rubella HOM05D005851 ORTHO05D007137 6.4e-38 162.2 101 71.3
MELO3C013999.2 Cucumis melo HOM05D005851 ORTHO05D007137 6.4e-38 162.2 110 67.3
Duzib205G1229 Durio zibethinus HOM05D005851 ORTHO05D007137 6.4e-38 162.2 102 71.6
Gohir.A12G222500 Gossypium hirsutum HOM05D005851 ORTHO05D007137 6.4e-38 162.2 101 72.3
Gohir.D12G225000 Gossypium hirsutum HOM05D005851 ORTHO05D007137 6.4e-38 162.2 101 72.3
Gorai.008G241100 Gossypium raimondii HOM05D005851 ORTHO05D007137 6.4e-38 162.2 101 72.3
Solyc08g007580.4 Solanum lycopersicum HOM05D005851 ORTHO05D007137 1.4e-37 161.0 112 65.2
Sopen08g003540 Solanum pennellii HOM05D005851 ORTHO05D007137 1.4e-37 161.0 112 65.2
A01p14080 Brassica napus HOM05D005851 ORTHO05D007137 1.9e-37 160.6 101 70.3
BolC1t01669H Brassica oleracea HOM05D005851 ORTHO05D007137 1.9e-37 160.6 101 70.3
BraA01t01356Z Brassica rapa HOM05D005851 ORTHO05D007137 1.9e-37 160.6 101 70.3
PGSC0003DMG400012515 Solanum tuberosum HOM05D005851 ORTHO05D007137 1.9e-37 160.6 104 68.3
Ciclev10024430m.g Citrus clementina HOM05D005851 ORTHO05D007137 4.1e-37 159.5 96 74.0
Nitab4.5_0001816g0070 Nicotiana tabacum HOM05D005851 ORTHO05D007137 5.4e-37 159.1 102 69.6
BcaNung01022 Brassica carinata HOM05D005851 ORTHO05D007137 7.0e-37 158.7 111 64.9
Nitab4.5_0001265g0130 Nicotiana tabacum HOM05D005851 ORTHO05D007137 7.0e-37 158.7 144 56.9
Cre12.g555400 Chlamydomonas reinhardtii HOM05D005851 ORTHO05D007137 9.2e-37 158.3 103 68.0
MSTRG.1924 Avicennia marina HOM05D005851 ORTHO05D007137 1.6e-36 157.5 101 69.3
CAN.G1394.24 Capsicum annuum HOM05D005851 ORTHO05D007137 1.0e-35 154.8 102 67.6
Lalb_Chr16g0379871 Lupinus albus HOM05D005851 ORTHO05D007137 3.9e-35 152.9 94 70.2
CiPaw.11G145200 Carya illinoinensis HOM05D005851 ORTHO05D007137 8.6e-35 151.8 91 73.6
Ah.02g116130 Amaranthus hybridus HOM05D005851 ORTHO05D007137 1.2e-33 147.9 82 80.5
Glyma.11G028600 Glycine max HOM05D005851 ORTHO05D007137 8.0e-33 145.2 137 55.5
FAN08G3582 Fragaria x ananassa HOM05D005851 ORTHO05D007137 2.3e-32 143.7 102 64.7
PRCOL_00005435 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 1.4e-29 134.4 109 56.9
SEGI_29987 Sequoiadendron giganteum HOM05D005851 ORTHO05D007137 1.4e-29 134.4 113 57.5
Sed0022049 Sechium edule HOM05D005851 ORTHO05D007137 3.2e-29 133.3 71 78.9
DCAR_000876 Daucus carota HOM05D005851 ORTHO05D007137 7.0e-29 132.1 93 65.6
Migut.E01010 Erythranthe guttata HOM05D005851 ORTHO05D007137 1.2e-28 131.3 72 76.4
Manes.02G031801 Manihot esculenta HOM05D005851 ORTHO05D007137 4.6e-28 129.4 88 64.8
CANSAT95G0001 Cannabis sativa HOM05D005851 ORTHO05D007137 6.0e-28 129.0 102 58.8
MCO03G553 Micromonas commoda HOM05D005851 ORTHO05D007137 8.6e-27 125.2 94 60.6
COL.COLO4_23838 Corchorus olitorius HOM05D005851 ORTHO05D007137 1.1e-26 124.8 77 71.4
VMungo1215G2211 Vigna mungo HOM05D005851 ORTHO05D007137 5.6e-26 122.5 73 71.2
PRCOL_00002729 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 1.2e-25 121.3 159 42.8
MCO14G091 Micromonas commoda HOM05D005851 ORTHO05D007137 1.5e-23 114.4 105 45.7
FAN18G0436 Fragaria x ananassa HOM05D005851 ORTHO05D007137 8.3e-22 108.6 102 53.9
Nn1g01189 Nelumbo nucifera HOM05D005851 ORTHO05D007137 9.2e-21 105.1 101 52.5
MCO14G294 Micromonas commoda HOM05D005851 ORTHO05D007137 2.1e-20 104.0 95 50.5
MD04G1076900 Malus domestica HOM05D005851 ORTHO05D007137 1.1e-16 91.7 54 75.9
Lj2A204T50 Lonicera japonica HOM05D005851 ORTHO05D007137 1.2e-15 88.2 50 70.0
Thecc.03G264400 Theobroma cacao HOM05D005851 ORTHO05D007137 1.2e-15 88.2 57 63.2
Eucgr.E00492 Eucalyptus grandis HOM05D005851 ORTHO05D007137 1.5e-15 87.8 48 75.0
PRCOL_00002728 Prasinoderma coloniale HOM05D005851 ORTHO05D049091 1.5e-15 87.8 93 46.2
CBR_g50783 Chara braunii HOM05D000019 ORTHO05D000002 3.4e-15 86.7 52 67.3
ClCG00G000050 Citrullus lanatus HOM05D005851 ORTHO05D007137 7.6e-15 85.5 135 36.3
ClCG00G004660 Citrullus lanatus HOM05D005851 ORTHO05D007137 7.6e-15 85.5 48 72.9
ClCG00G005270 Citrullus lanatus HOM05D005851 ORTHO05D007137 7.6e-15 85.5 135 36.3
ClCG10G003300 Citrullus lanatus HOM05D005851 ORTHO05D007137 7.6e-15 85.5 135 36.3
Dinv39057 Davidia involucrata HOM05D005851 ORTHO05D007137 1.3e-14 84.7 53 73.6
Lsat_1_v5_gn_6_10241 Lactuca sativa HOM05D005851 ORTHO05D007137 1.3e-14 84.7 57 63.2
Ca_06681_v3 Cicer arietinum L. HOM05D000943 ORTHO05D002475 3.8e-14 83.2 84 44.0
unitig_699.g19746 Utricularia gibba HOM05D002021 ORTHO05D002077 6.4e-14 82.4 52 65.4
PSO782G0540 Papaver somniferum HOM05D005851 ORTHO05D007137 8.4e-14 82.0 87 46.0
Hund14676 Selenicereus undatus HOM05D005851 ORTHO05D007137 1.4e-13 81.3 49 65.3
Nn4g26436 Nelumbo nucifera HOM05D005851 ORTHO05D007137 1.2e-12 78.2 52 69.2
BolC3t15330H Brassica oleracea HOM05D005851 ORTHO05D007137 2.0e-07 60.8 41 63.4


User provided reference genes

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