Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0066s0003 Marchantia polymorpha HOM05D040683 ORTHO05D003587 2.7e-219 765.0 383 100.0
Mapoly0072s0063 Marchantia polymorpha HOM05D040683 ORTHO05D003587 4.4e-100 369.0 307 65.1
Mapoly0032s0053 Marchantia polymorpha HOM05D040683 ORTHO05D003587 5.1e-40 169.5 154 61.0
Pp3c24_6860 Physcomitrium patens HOM05D003575 ORTHO05D003587 2.9e-19 100.5 218 31.2
Mapoly0021s0099 Marchantia polymorpha HOM05D003575 ORTHO05D003587 9.4e-18 95.5 177 31.6
Lj6g0014157 Lotus japonicus HOM05D003575 ORTHO05D003587 4.8e-14 83.2 185 30.8
Mapoly0006s0057 Marchantia polymorpha HOM05D000268 ORTHO05D000261 1.4e-13 81.6 70 70.0
Aqoxy5G03850 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 3.1e-13 80.5 210 30.5
Carub.0007s1568 Capsella rubella HOM05D003575 ORTHO05D003587 5.3e-13 79.7 170 32.9
Sp7g23350 Schrenkiella parvula HOM05D003575 ORTHO05D003587 5.3e-13 79.7 174 32.8
CSS0035464 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 1.5e-12 78.2 168 31.0
PSO170G1005 Papaver somniferum HOM05D003575 ORTHO05D003587 1.5e-12 78.2 152 33.6
ATR0751G270 Amborella trichopoda HOM05D003575 ORTHO05D003587 2.0e-12 77.8 208 28.4
FAN14G2021 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.0e-12 77.8 206 30.6
Actinidia07857 Actinidia chinensis HOM05D003575 ORTHO05D003587 3.4e-12 77.0 158 31.6
Glyma.13G186300 Glycine max HOM05D003575 ORTHO05D003587 3.4e-12 77.0 178 28.7
BolC7t45906H Brassica oleracea HOM05D003575 ORTHO05D003587 7.7e-12 75.9 169 30.8
Gohir.D07G092200 Gossypium hirsutum HOM05D003575 ORTHO05D003587 7.7e-12 75.9 165 33.3
Gorai.001G098800 Gossypium raimondii HOM05D003575 ORTHO05D003587 7.7e-12 75.9 165 33.3
C07p54200 Brassica napus HOM05D003575 ORTHO05D003587 1.3e-11 75.1 169 30.8
AL7G27800 Arabidopsis lyrata HOM05D003575 ORTHO05D003587 1.7e-11 74.7 172 30.8
AT4G25330 Arabidopsis thaliana HOM05D003575 ORTHO05D003587 1.7e-11 74.7 173 31.8
BraA03t14662Z Brassica rapa HOM05D003575 ORTHO05D003587 1.7e-11 74.7 169 31.4
Phvul.007G122046 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 1.7e-11 74.7 195 27.2
arahy.Tifrunner.gnm1.ann1.04VE6P Arachis hypogaea HOM05D003575 ORTHO05D003587 2.2e-11 74.3 171 28.1
BcaC06g32820 Brassica carinata HOM05D003575 ORTHO05D003587 2.2e-11 74.3 169 30.8
A03p55910 Brassica napus HOM05D003575 ORTHO05D003587 2.9e-11 73.9 169 31.4
DCAR_019672 Daucus carota HOM05D003575 ORTHO05D003587 2.9e-11 73.9 213 25.8
FvH4_6g40510 Fragaria vesca HOM05D003575 ORTHO05D003587 2.9e-11 73.9 266 26.3
Glyma.13G007400 Glycine max HOM05D003575 ORTHO05D003587 2.9e-11 73.9 140 32.9
PSO832G3669 Papaver somniferum HOM05D003575 ORTHO05D003587 2.9e-11 73.9 140 31.4
arahy.Tifrunner.gnm1.ann1.F2CSMS Arachis hypogaea HOM05D003575 ORTHO05D003587 3.8e-11 73.6 171 28.1
arahy.Tifrunner.gnm1.ann1.RMR7W1 Arachis hypogaea HOM05D003575 ORTHO05D003587 3.8e-11 73.6 171 28.1
PSO013G0383 Papaver somniferum HOM05D003575 ORTHO05D003587 3.8e-11 73.6 140 30.7
CDE04G2197 Ceratophyllum demersum HOM05D003575 ORTHO05D003587 5.0e-11 73.2 230 26.5
Thhalv10027138m.g Eutrema salsugineum HOM05D003575 ORTHO05D003587 5.0e-11 73.2 172 31.4
SHI10168 Sapria himalayana HOM05D003575 ORTHO05D003587 5.0e-11 73.2 138 30.4
Gohir.A11G148300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 8.5e-11 72.4 183 31.7
Manes.12G063604 Manihot esculenta HOM05D003575 ORTHO05D003587 8.5e-11 72.4 139 31.7
Manes.12G092200 Manihot esculenta HOM05D003575 ORTHO05D003587 8.5e-11 72.4 166 30.7
Solyc12g006060.2 Solanum lycopersicum HOM05D003575 ORTHO05D003587 1.1e-10 72.0 227 25.6
Sopen12g002030 Solanum pennellii HOM05D003575 ORTHO05D003587 1.1e-10 72.0 227 26.0
VMungo0647G0230 Vigna mungo HOM05D003575 ORTHO05D003587 1.1e-10 72.0 173 26.0
CANSAT64G0731 Cannabis sativa HOM05D003575 ORTHO05D003587 1.4e-10 71.6 141 31.9
PGSC0003DMG401004292 Solanum tuberosum HOM05D003575 ORTHO05D003587 1.4e-10 71.6 225 27.6
TAR626G1391 Trochodendron aralioides HOM05D003575 ORTHO05D003587 1.4e-10 71.6 237 26.2
Oeu029955.1 Olea europaea HOM05D003575 ORTHO05D003587 1.9e-10 71.2 137 32.1
PSO013G0348 Papaver somniferum HOM05D003575 ORTHO05D003587 1.9e-10 71.2 140 30.0
PGSC0003DMG400017406 Solanum tuberosum HOM05D003575 ORTHO05D003587 1.9e-10 71.2 157 30.6
Aqoxy5G03849 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 2.5e-10 70.9 200 29.5
Gorai.007G165400 Gossypium raimondii HOM05D003575 ORTHO05D003587 2.5e-10 70.9 183 31.1
PSO832G1021 Papaver somniferum HOM05D003575 ORTHO05D003587 2.5e-10 70.9 142 30.3
Phvul.011G189400 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 2.5e-10 70.9 218 28.4
Potri.002G216900 Populus trichocarpa HOM05D003575 ORTHO05D003587 2.5e-10 70.9 199 26.6
Prupe.3G196500 Prunus persica HOM05D003575 ORTHO05D003587 2.5e-10 70.9 220 29.1
Gohir.D11G155100 Gossypium hirsutum HOM05D003575 ORTHO05D003587 3.2e-10 70.5 183 31.1
Rhsim06G0177900 Rhododendron simsii HOM05D003575 ORTHO05D003587 4.2e-10 70.1 138 34.8
Nn1g03152 Nelumbo nucifera HOM05D003575 ORTHO05D003587 5.5e-10 69.7 219 28.3
Aqoxy1G03433 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 7.2e-10 69.3 147 29.3
Lalb_Chr14g0362581 Lupinus albus HOM05D003575 ORTHO05D003587 9.4e-10 68.9 134 29.9
Nitab4.5_0009864g0030 Nicotiana tabacum HOM05D003575 ORTHO05D003587 9.4e-10 68.9 202 26.7
TWI18G0759 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 9.4e-10 68.9 138 28.3
MD17G1118100 Malus domestica HOM05D003575 ORTHO05D003587 1.2e-09 68.6 229 26.6
FAN21G0497 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.6e-09 68.2 140 33.6
FvH4_3g20410 Fragaria vesca HOM05D003575 ORTHO05D003587 2.1e-09 67.8 142 33.8
FAN11G3075 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.1e-09 67.8 142 33.8
HanXRQChr04g0126401 Helianthus annuus HOM05D003575 ORTHO05D003587 2.1e-09 67.8 198 29.8
PSO013G0119 Papaver somniferum HOM05D003575 ORTHO05D003587 2.1e-09 67.8 139 30.9
PSO339G1364 Papaver somniferum HOM05D003575 ORTHO05D003587 2.1e-09 67.8 140 32.1
PSO339G4641 Papaver somniferum HOM05D003575 ORTHO05D003587 2.1e-09 67.8 140 32.1
Sopen07g023850 Solanum pennellii HOM05D003575 ORTHO05D003587 2.1e-09 67.8 137 29.9
PSO832G1827 Papaver somniferum HOM05D003575 ORTHO05D003587 2.7e-09 67.4 137 31.4
CiPaw.04G197600 Carya illinoinensis HOM05D003575 ORTHO05D003587 3.6e-09 67.0 141 29.8
PSO675G6399 Papaver somniferum HOM05D003575 ORTHO05D003587 3.6e-09 67.0 139 28.1
Solyc07g045320.3 Solanum lycopersicum HOM05D003575 ORTHO05D003587 3.6e-09 67.0 137 29.9
ClCG02G002950 Citrullus lanatus HOM05D003575 ORTHO05D003587 4.7e-09 66.6 160 27.5
PSO013G0266 Papaver somniferum HOM05D003575 ORTHO05D003587 7.9e-09 65.9 141 29.1
SGA_v2.0_scaffold407G51066 Striga asiatica HOM05D003575 ORTHO05D003587 1.0e-08 65.5 221 26.7
THA.LOC104812766 Tarenaya hassleriana HOM05D003575 ORTHO05D003587 1.0e-08 65.5 192 29.7
QL04p067739 Quercus lobata HOM05D003575 ORTHO05D003587 1.4e-08 65.1 151 28.5
CANSAT21G1971 Cannabis sativa HOM05D003575 ORTHO05D003587 1.8e-08 64.7 141 30.5
Ciclev10015675m.g Citrus clementina HOM05D003575 ORTHO05D003587 1.8e-08 64.7 141 27.7
PSO013G0020 Papaver somniferum HOM05D003575 ORTHO05D003587 2.3e-08 64.3 139 28.8
AUR62029125 Chenopodium quinoa HOM05D003575 ORTHO05D003587 3.0e-08 63.9 136 28.7
Haze_12614 Corylus avellana HOM05D003366 ORTHO05D004045 3.0e-08 63.9 146 30.1
FAN18G1810 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.0e-08 63.9 138 29.7
FAN18G2204 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.0e-08 63.9 138 29.7
Peaxi162Scf00047g02035 Petunia axillaris HOM05D003575 ORTHO05D003587 3.0e-08 63.9 136 27.9
MSTRG.426 Avicennia marina HOM05D003575 ORTHO05D003587 3.9e-08 63.5 144 33.3
CsaV3_3G046180 Cucumis sativus L. HOM05D003575 ORTHO05D003587 3.9e-08 63.5 135 31.9
PSO541G2609 Papaver somniferum HOM05D003575 ORTHO05D003587 3.9e-08 63.5 139 27.3
RcHm_v2.0_Chr2g0133241 Rosa chinensis HOM05D003575 ORTHO05D003587 3.9e-08 63.5 211 28.9
PGSC0003DMG400017442 Solanum tuberosum HOM05D003575 ORTHO05D003587 3.9e-08 63.5 217 27.6
Haze_12603 Corylus avellana HOM05D003366 ORTHO05D004045 5.2e-08 63.2 146 30.1
Sabra02G0168700 Salix brachista HOM05D003575 ORTHO05D003587 5.2e-08 63.2 228 26.8
Sed0014111 Sechium edule HOM05D003575 ORTHO05D003587 5.2e-08 63.2 143 30.1
RcHm_v2.0_Chr5g0034301 Rosa chinensis HOM05D003575 ORTHO05D003587 6.7e-08 62.8 140 33.6
FvH4_3g17720 Fragaria vesca HOM05D003575 ORTHO05D003587 1.5e-07 61.6 138 30.4
Hma1.2p1_0599F.1_g187070 Hydrangea macrophylla HOM05D003575 ORTHO05D003587 1.5e-07 61.6 155 30.3
RcHm_v2.0_Chr7g0213061 Rosa chinensis HOM05D003575 ORTHO05D003587 2.0e-07 61.2 290 26.2
AUR62014996 Chenopodium quinoa HOM05D003575 ORTHO05D003587 7.4e-07 59.3 142 27.5
COL.COLO4_19638 Corchorus olitorius HOM05D003575 ORTHO05D003587 7.4e-07 59.3 160 28.1
Dinv26593 Davidia involucrata HOM05D003575 ORTHO05D003587 7.4e-07 59.3 99 35.4
SalBow1G3222 Salvia bowleyana HOM05D003575 ORTHO05D003587 7.4e-07 59.3 229 25.3
TAR624G0842 Trochodendron aralioides HOM05D003575 ORTHO05D003587 7.4e-07 59.3 137 29.2
vmacro12070 Vaccinium macrocarpon HOM05D003575 ORTHO05D003587 7.4e-07 59.3 231 26.4
AUR62035876 Chenopodium quinoa HOM05D003575 ORTHO05D003587 9.7e-07 58.9 136 30.1
unitig_0.g2570 Utricularia gibba HOM05D001613 ORTHO05D001556 2.2e-06 57.8 136 30.9
PSO017G4852 Papaver somniferum HOM05D003575 ORTHO05D003587 3.7e-06 57.0 132 29.5


User provided reference genes

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