Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0065s0037 Marchantia polymorpha HOM05D004626 ORTHO05D005185 1.7e-61 239.2 123 100.0
Pp3c1_13270 Physcomitrium patens HOM05D004626 ORTHO05D005185 1.5e-38 162.9 114 71.1
SEGI_37892 Sequoiadendron giganteum HOM05D004626 ORTHO05D005185 2.4e-31 139.0 116 62.1
TWI53G1689 Tripterygium wilfordii HOM05D004626 ORTHO05D005185 4.5e-30 134.8 113 61.9
TWI77G0829 Tripterygium wilfordii HOM05D004626 ORTHO05D005185 4.5e-30 134.8 113 61.1
TAR628G0369 Trochodendron aralioides HOM05D004626 ORTHO05D005185 4.5e-30 134.8 109 61.5
Cc07_g15200 Coffea canephora HOM05D004626 ORTHO05D005185 5.8e-30 134.4 120 57.5
Cpa.g.sc974.3 Carica papaya HOM05D004626 ORTHO05D005185 1.0e-29 133.7 109 61.5
Ciclev10026391m.g Citrus clementina HOM05D004626 ORTHO05D005185 1.0e-29 133.7 120 57.5
Hund13624 Selenicereus undatus HOM05D004626 ORTHO05D005185 1.3e-29 133.3 113 61.9
Prupe.6G187100 Prunus persica HOM05D004626 ORTHO05D005185 1.7e-29 132.9 117 58.1
Hund16286 Selenicereus undatus HOM05D004626 ORTHO05D005185 1.7e-29 132.9 121 58.7
ATR0693G394 Amborella trichopoda HOM05D004626 ORTHO05D005185 2.9e-29 132.1 113 57.5
MBI05_g19353_MAGBIO Magnolia biondii HOM05D004626 ORTHO05D005185 3.8e-29 131.7 109 60.6
Dinv21908 Davidia involucrata HOM05D004626 ORTHO05D005185 4.9e-29 131.3 109 60.6
Nn2g14516 Nelumbo nucifera HOM05D004626 ORTHO05D005185 8.4e-29 130.6 109 59.6
SGA_v2.0_scaffold111G31515 Striga asiatica HOM05D004626 ORTHO05D005185 1.4e-28 129.8 109 59.6
SGA_v2.0_scaffold54G19499 Striga asiatica HOM05D004626 ORTHO05D005185 1.4e-28 129.8 117 58.1
CANSAT01G3216 Cannabis sativa HOM05D004626 ORTHO05D005185 1.9e-28 129.4 120 56.7
Thhalv10026378m.g Eutrema salsugineum HOM05D004626 ORTHO05D005185 1.9e-28 129.4 112 58.9
Sc20g0005870 Simmondsia chinensis HOM05D004626 ORTHO05D005185 1.9e-28 129.4 109 59.6
Thecc.01G101400 Theobroma cacao HOM05D004626 ORTHO05D005185 1.9e-28 129.4 109 59.6
GSVIVG01002466001 Vitis vinifera HOM05D004626 ORTHO05D005185 1.9e-28 129.4 117 57.3
A01p00780 Brassica napus HOM05D004626 ORTHO05D005185 2.5e-28 129.0 108 61.1
BraA01t00081Z Brassica rapa HOM05D004626 ORTHO05D005185 2.5e-28 129.0 108 61.1
Ca_16525_v3 Cicer arietinum L. HOM05D004626 ORTHO05D005185 2.5e-28 129.0 117 56.4
ClCG10G009000 Citrullus lanatus HOM05D004626 ORTHO05D005185 2.5e-28 129.0 107 60.7
Psat5g090160 Pisum sativum HOM05D004626 ORTHO05D005185 2.5e-28 129.0 117 56.4
Sp7g36010 Schrenkiella parvula HOM05D004626 ORTHO05D005185 2.5e-28 129.0 108 61.1
Oeu056607.1 Olea europaea HOM05D004626 ORTHO05D005185 3.2e-28 128.6 130 53.1
Phvul.008G217800 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 3.2e-28 128.6 101 62.4
Phvul.L001740 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 3.2e-28 128.6 101 62.4
Phvul.L002040 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 3.2e-28 128.6 101 62.4
CARHR246820 Cardamine hirsuta HOM05D004626 ORTHO05D005185 4.2e-28 128.3 108 61.1
Dinv13189 Davidia involucrata HOM05D004626 ORTHO05D005185 4.2e-28 128.3 109 58.7
Manes.12G134800 Manihot esculenta HOM05D004626 ORTHO05D005185 4.2e-28 128.3 109 60.6
CDE10G0605 Ceratophyllum demersum HOM05D004626 ORTHO05D005185 5.5e-28 127.9 102 59.8
Migut.H02360 Erythranthe guttata HOM05D004626 ORTHO05D005185 5.5e-28 127.9 109 58.7
BcaNung03404 Brassica carinata HOM05D004626 ORTHO05D005185 7.1e-28 127.5 108 59.3
C07p62810 Brassica napus HOM05D004626 ORTHO05D005185 7.1e-28 127.5 108 59.3
BolC7t46695H Brassica oleracea HOM05D004626 ORTHO05D005185 7.1e-28 127.5 108 59.3
CAN.G222.27 Capsicum annuum HOM05D004626 ORTHO05D005185 7.1e-28 127.5 109 58.7
Gohir.A11G201300 Gossypium hirsutum HOM05D004626 ORTHO05D005185 7.1e-28 127.5 120 56.7
MD01G1030100 Malus domestica HOM05D004626 ORTHO05D005185 7.1e-28 127.5 106 61.3
AUR62002008 Chenopodium quinoa HOM05D004626 ORTHO05D005185 9.3e-28 127.1 119 56.3
AUR62003794 Chenopodium quinoa HOM05D004626 ORTHO05D005185 9.3e-28 127.1 119 56.3
COL.COLO4_09965 Corchorus olitorius HOM05D004626 ORTHO05D005185 9.3e-28 127.1 97 63.9
CsaV3_4G008860 Cucumis sativus L. HOM05D004626 ORTHO05D005185 9.3e-28 127.1 107 58.9
Duzib147G1109 Durio zibethinus HOM05D004626 ORTHO05D005185 9.3e-28 127.1 102 61.8
Eucgr.I00432 Eucalyptus grandis HOM05D004626 ORTHO05D005185 9.3e-28 127.1 107 59.8
Actinidia28864 Actinidia chinensis HOM05D004626 ORTHO05D005185 1.2e-27 126.7 107 58.9
Gohir.D11G221600 Gossypium hirsutum HOM05D004626 ORTHO05D005185 1.2e-27 126.7 120 56.7
MD15G1324000 Malus domestica HOM05D004626 ORTHO05D005185 1.2e-27 126.7 120 55.8
QL06p049512 Quercus lobata HOM05D004626 ORTHO05D005185 1.2e-27 126.7 109 56.9
Aa31LG6G15380 Aethionema arabicum HOM05D004626 ORTHO05D005185 1.6e-27 126.3 114 57.9
Aqoxy6G00796 Aquilegia oxysepala HOM05D004626 ORTHO05D005185 1.6e-27 126.3 109 57.8
BcaNung02302 Brassica carinata HOM05D004626 ORTHO05D005185 1.6e-27 126.3 108 60.2
BcaNung06392 Brassica carinata HOM05D004626 ORTHO05D005185 1.6e-27 126.3 107 60.7
A03p65840 Brassica napus HOM05D004626 ORTHO05D005185 1.6e-27 126.3 108 59.3
BraA03t15636Z Brassica rapa HOM05D004626 ORTHO05D005185 1.6e-27 126.3 108 59.3
Gorai.007G238600 Gossypium raimondii HOM05D004626 ORTHO05D005185 1.6e-27 126.3 120 56.7
PSO541G2613 Papaver somniferum HOM05D004626 ORTHO05D005185 1.6e-27 126.3 120 55.8
PSO781G0234 Papaver somniferum HOM05D004626 ORTHO05D005185 1.6e-27 126.3 120 55.8
Atru.chr4.63 Acer truncatum HOM05D004626 ORTHO05D005185 2.1e-27 125.9 115 58.3
BolC1t00090H Brassica oleracea HOM05D004626 ORTHO05D005185 2.1e-27 125.9 114 57.9
CiPaw.03G141900 Carya illinoinensis HOM05D004626 ORTHO05D005185 2.1e-27 125.9 119 54.6
MELO3C018951.2 Cucumis melo HOM05D004626 ORTHO05D005185 2.1e-27 125.9 107 57.9
Lalb_Chr11g0075381 Lupinus albus HOM05D004626 ORTHO05D005185 2.1e-27 125.9 116 56.0
Nitab4.5_0000004g0320 Nicotiana tabacum HOM05D004626 ORTHO05D005185 2.1e-27 125.9 120 55.0
Nitab4.5_0003026g0030 Nicotiana tabacum HOM05D004626 ORTHO05D005185 2.1e-27 125.9 120 55.0
Sc16g0005030 Simmondsia chinensis HOM05D004626 ORTHO05D005185 2.1e-27 125.9 109 58.7
Solyc11g011140.2 Solanum lycopersicum HOM05D004626 ORTHO05D005185 2.1e-27 125.9 120 55.0
Sopen11g005900 Solanum pennellii HOM05D004626 ORTHO05D005185 2.1e-27 125.9 120 55.0
TAR381G1723 Trochodendron aralioides HOM05D004626 ORTHO05D005185 2.1e-27 125.9 109 57.8
BcaNung00909 Brassica carinata HOM05D004626 ORTHO05D005185 2.7e-27 125.6 114 57.9
C01p00890 Brassica napus HOM05D004626 ORTHO05D005185 2.7e-27 125.6 114 57.9
Cfa002662 Carpinus fangiana HOM05D004626 ORTHO05D005185 2.7e-27 125.6 119 54.6
Haze_24931 Corylus avellana HOM05D004626 ORTHO05D005185 2.7e-27 125.6 119 54.6
Duzib264G0371 Durio zibethinus HOM05D004626 ORTHO05D005185 2.7e-27 125.6 106 60.4
Ah.02g122510 Amaranthus hybridus HOM05D004626 ORTHO05D005185 3.5e-27 125.2 112 56.2
AT4G39880 Arabidopsis thaliana HOM05D004626 ORTHO05D005185 3.5e-27 125.2 108 59.3
DCAR_014224 Daucus carota HOM05D004626 ORTHO05D005185 3.5e-27 125.2 107 57.9
Potri.005G075500 Populus trichocarpa HOM05D004626 ORTHO05D005185 3.5e-27 125.2 109 59.6
Sed0012532 Sechium edule HOM05D004626 ORTHO05D005185 3.5e-27 125.2 116 55.2
VMungo0647G0150 Vigna mungo HOM05D004626 ORTHO05D005185 3.5e-27 125.2 100 61.0
AL7G12120 Arabidopsis lyrata HOM05D004626 ORTHO05D005185 4.6e-27 124.8 108 59.3
TAR381G1658 Trochodendron aralioides HOM05D004626 ORTHO05D005185 4.6e-27 124.8 109 55.0
arahy.Tifrunner.gnm1.ann1.IYB3ER Arachis hypogaea HOM05D004626 ORTHO05D005185 6.0e-27 124.4 100 61.0
MSTRG.2568 Avicennia marina HOM05D004626 ORTHO05D005185 6.0e-27 124.4 117 53.8
EL10Ac6g15105 Beta vulgaris HOM05D004626 ORTHO05D005185 6.0e-27 124.4 106 59.4
HanXRQChr10g0305361 Helianthus annuus HOM05D004626 ORTHO05D005185 6.0e-27 124.4 109 56.0
Nitab4.5_0002169g0010 Nicotiana tabacum HOM05D004626 ORTHO05D005185 6.0e-27 124.4 120 54.2
Carub.0007s0181 Capsella rubella HOM05D004626 ORTHO05D005185 7.9e-27 124.0 108 58.3
Glyma.18G017100 Glycine max HOM05D004626 ORTHO05D005185 7.9e-27 124.0 119 54.6
PGR102G1283 Punica granatum HOM05D004626 ORTHO05D005185 7.9e-27 124.0 107 58.9
RcHm_v2.0_Chr2g0113491 Rosa chinensis HOM05D004626 ORTHO05D005185 7.9e-27 124.0 109 56.9
CSS0038413 Camellia sinensis var. sinensis HOM05D004626 ORTHO05D005185 1.0e-26 123.6 107 57.0
arahy.Tifrunner.gnm1.ann1.ZXJH7W Arachis hypogaea HOM05D004626 ORTHO05D005185 1.3e-26 123.2 100 60.0
SHI34078 Sapria himalayana HOM05D004626 ORTHO05D005185 1.3e-26 123.2 109 56.9
unitig_749.g13443 Utricularia gibba HOM05D004626 ORTHO05D005185 1.3e-26 123.2 112 54.5
Lsat_1_v5_gn_4_141400 Lactuca sativa HOM05D004626 ORTHO05D005185 1.8e-26 122.9 119 52.1
TPR.G17855 Trifolium pratense HOM05D004626 ORTHO05D005185 2.3e-26 122.5 117 53.8
ECA232G0540 Erigeron canadensis HOM05D004626 ORTHO05D001353 5.1e-26 121.3 102 55.9
Rhsim08G0010500 Rhododendron simsii HOM05D004626 ORTHO05D005185 5.1e-26 121.3 107 57.9
THA.LOC104807692 Tarenaya hassleriana HOM05D004626 ORTHO05D005185 5.1e-26 121.3 116 56.0
Lj6g0027398 Lotus japonicus HOM05D004626 ORTHO05D005185 8.7e-26 120.6 119 54.6
Nitab4.5_0012380g0020 Nicotiana tabacum HOM05D004626 ORTHO05D005185 8.7e-26 120.6 107 57.0
FAN19G0994 Fragaria x ananassa HOM05D004626 ORTHO05D005185 1.9e-25 119.4 109 56.0
FAN23G0429 Fragaria x ananassa HOM05D004626 ORTHO05D005185 1.9e-25 119.4 109 56.0
FAN26G0520 Fragaria x ananassa HOM05D004626 ORTHO05D005185 1.9e-25 119.4 109 56.0
HPP92_019309 Vanilla planifolia HOM05D004626 ORTHO05D005185 4.3e-25 118.2 105 61.0
FvH4_1g20880 Fragaria vesca HOM05D004626 ORTHO05D005185 7.4e-25 117.5 109 55.0
Medtr3g087190 Medicago truncatula HOM05D004626 ORTHO05D005185 1.6e-24 116.3 117 51.3
AagrBONN_evm.TU.Sc2ySwM_117.40 Anthoceros agrestis HOM05D004626 ORTHO05D005185 6.3e-24 114.4 78 71.8
Lj4A891T55 Lonicera japonica HOM05D004626 ORTHO05D005185 1.8e-23 112.8 116 51.7
SMO134G0295 Selaginella moellendorffii HOM05D004626 ORTHO05D005185 5.3e-23 111.3 97 53.6
Lj4g0016107 Lotus japonicus HOM05D004626 ORTHO05D005185 6.9e-23 110.9 108 52.8
TPR.G17173 Trifolium pratense HOM05D004626 ORTHO05D005185 1.5e-22 109.8 91 58.2
QL11p020935 Quercus lobata HOM05D004626 ORTHO05D005185 2.0e-22 109.4 102 55.9
QL11p021166 Quercus lobata HOM05D004626 ORTHO05D005185 3.4e-22 108.6 102 55.9
MD06G1167700 Malus domestica HOM05D004626 ORTHO05D005185 2.2e-21 105.9 116 49.1
Sabra05G0062000 Salix brachista HOM05D004626 ORTHO05D005185 8.5e-21 104.0 89 58.4
Cfa005597 Carpinus fangiana HOM05D004626 ORTHO05D005185 1.1e-20 103.6 103 51.5
Glyma.05G178600 Glycine max HOM05D004626 ORTHO05D005185 1.4e-20 103.2 105 53.3
Glyma.08G135700 Glycine max HOM05D004626 ORTHO05D005185 1.4e-20 103.2 97 55.7
Hma1.2p1_0308F.1_g120190 Hydrangea macrophylla HOM05D004626 ORTHO05D005185 1.4e-20 103.2 100 52.0
Os07g0415200 Oryza sativa ssp. japonica HOM05D004626 ORTHO05D005185 1.9e-20 102.8 121 50.4
Zm00001eb120260 Zea mays HOM05D004626 ORTHO05D005185 1.9e-20 102.8 121 48.8
CiPaw.05G035400 Carya illinoinensis HOM05D004626 ORTHO05D005185 5.5e-20 101.3 100 49.0
FAN28G0327 Fragaria x ananassa HOM05D004626 ORTHO05D005185 9.3e-20 100.5 82 62.2
VMungo0251G0963 Vigna mungo HOM05D004626 ORTHO05D005185 1.0e-18 97.1 93 57.0
Phvul.002G256100 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 3.0e-18 95.5 105 48.6
VMungo1383G1685 Vigna mungo HOM05D004626 ORTHO05D005185 6.7e-18 94.4 76 60.5
THA.LOC104818439 Tarenaya hassleriana HOM05D004626 ORTHO05D005185 8.8e-18 94.0 84 54.8
arahy.Tifrunner.gnm1.ann1.VCFG2H Arachis hypogaea HOM05D004626 ORTHO05D005185 2.2e-16 89.4 87 50.6
TPR.G6292 Trifolium pratense HOM05D004626 ORTHO05D005185 8.2e-16 87.4 111 46.8
Medtr8g090225 Medicago truncatula HOM05D004626 ORTHO05D005185 4.1e-15 85.1 104 47.1
Lalb_Chr12g0203831 Lupinus albus HOM05D004626 ORTHO05D005185 9.1e-15 84.0 82 48.8
DCAR_001782 Daucus carota HOM05D004626 ORTHO05D005185 7.7e-14 80.9 67 58.2
MCO11G885 Micromonas commoda HOM05D004626 ORTHO05D005185 7.7e-14 80.9 106 42.5
Nitab4.5_0000308g0400 Nicotiana tabacum HOM05D004626 ORTHO05D005185 1.7e-13 79.7 79 53.2
Peaxi162Scf00611g00021 Petunia axillaris HOM05D004626 ORTHO05D005185 3.8e-13 78.6 79 51.9
Gohir.A02G143100 Gossypium hirsutum HOM05D004626 ORTHO05D005185 6.5e-13 77.8 64 60.9
Ciclev10029799m.g Citrus clementina HOM05D004626 ORTHO05D005185 1.1e-12 77.0 87 50.6
Lalb_Chr22g0353781 Lupinus albus HOM05D004626 ORTHO05D005185 1.4e-12 76.6 75 50.7
Gohir.D03G037250 Gossypium hirsutum HOM05D004626 ORTHO05D005185 3.2e-12 75.5 67 56.7
Nn1g04969 Nelumbo nucifera HOM05D004626 ORTHO05D005185 7.2e-12 74.3 104 40.4
vmacro18600 Vaccinium macrocarpon HOM05D004626 ORTHO05D005185 1.2e-11 73.6 66 54.5
Potri.007G093100 Populus trichocarpa HOM05D004626 ORTHO05D005185 1.6e-11 73.2 106 37.7
Nitab4.5_0006375g0050 Nicotiana tabacum HOM05D004626 ORTHO05D005185 1.4e-10 70.1 66 54.5
Cre17.g727350 Chlamydomonas reinhardtii HOM05D004626 ORTHO05D005185 7.4e-09 64.3 83 43.4
SalBow3G4134 Salvia bowleyana HOM05D004626 ORTHO05D005185 3.1e-07 58.9 53 56.6
Medtr3g079680 Medicago truncatula HOM05D004626 ORTHO05D005185 9.1e-07 57.4 81 40.7


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