Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0064s0113 Marchantia polymorpha HOM05D022608 ORTHO05D030101 5.5e-230 800.8 464 100.0
Mapoly0064s0112 Marchantia polymorpha HOM05D022608 ORTHO05D030101 4.2e-121 439.1 465 55.7
Mapoly0151s0025 Marchantia polymorpha HOM05D022608 ORTHO05D030101 6.6e-42 176.0 262 39.3
Mapoly0129s0028 Marchantia polymorpha HOM05D022608 ORTHO05D030101 7.6e-38 162.5 273 35.9
FAN18G4569 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.6e-11 75.1 437 22.7
COL.COLO4_38378 Corchorus olitorius HOM05D000053 ORTHO05D000035 3.5e-11 73.9 478 25.3
FvH4_5g20780 Fragaria vesca HOM05D000071 ORTHO05D000029 1.0e-10 72.4 437 22.7
Peaxi162Scf00083g01719 Petunia axillaris HOM05D001705 ORTHO05D002725 2.5e-09 67.8 123 30.9
Eucgr.E01229 Eucalyptus grandis HOM05D000053 ORTHO05D000035 5.6e-09 66.6 123 35.0
RcHm_v2.0_Chr7g0207001 Rosa chinensis HOM05D000071 ORTHO05D000029 7.4e-09 66.2 470 22.1
Mapoly0090s0078 Marchantia polymorpha HOM05D022608 ORTHO05D002217 9.6e-09 65.9 268 24.3
HPP92_015465 Vanilla planifolia HOM05D002120 ORTHO05D002217 1.3e-08 65.5 263 26.2
AagrBONN_evm.TU.Sc2ySwM_344.1981 Anthoceros agrestis HOM05D010742 ORTHO05D000029 3.7e-08 63.9 244 25.4
DCAR_021489 Daucus carota HOM05D001705 ORTHO05D002725 8.2e-08 62.8 144 28.5
Lsat_1_v5_gn_3_75380 Lactuca sativa HOM05D001705 ORTHO05D002725 1.1e-07 62.4 121 32.2
Cc07_g10340 Coffea canephora HOM05D001705 ORTHO05D002725 2.4e-07 61.2 149 28.2
Nitab4.5_0004086g0010 Nicotiana tabacum HOM05D001705 ORTHO05D002725 2.4e-07 61.2 123 32.5
Potri.012G025100 Populus trichocarpa HOM05D000053 ORTHO05D000035 2.4e-07 61.2 243 28.0
QL03p007316 Quercus lobata HOM05D000053 ORTHO05D000035 2.4e-07 61.2 129 32.6
ATR0618G168 Amborella trichopoda HOM05D000053 ORTHO05D000448 3.1e-07 60.8 136 31.6
Nitab4.5_0002266g0090 Nicotiana tabacum HOM05D001705 ORTHO05D002725 3.1e-07 60.8 114 34.2
Prupe.2G130600 Prunus persica HOM05D000053 ORTHO05D000035 4.0e-07 60.5 363 29.5
CSS0005183 Camellia sinensis var. sinensis HOM05D001705 ORTHO05D002725 5.3e-07 60.1 139 30.2
MELO3C007881.2 Cucumis melo HOM05D001705 ORTHO05D002725 5.3e-07 60.1 149 31.5
MBI14_g14051_MAGBIO Magnolia biondii HOM05D000053 ORTHO05D000448 5.3e-07 60.1 84 38.1
Potri.005G117700 Populus trichocarpa HOM05D001705 ORTHO05D002725 5.3e-07 60.1 139 29.5
BolC8t52731H Brassica oleracea HOM05D000053 ORTHO05D000035 6.9e-07 59.7 270 25.6
ClCG01G020070 Citrullus lanatus HOM05D001705 ORTHO05D002725 9.0e-07 59.3 116 31.9
CsaV3_6G046840 Cucumis sativus L. HOM05D001705 ORTHO05D002725 9.0e-07 59.3 123 30.1
Dinv40050 Davidia involucrata HOM05D001705 ORTHO05D002725 9.0e-07 59.3 142 29.6
Pp3c19_8660 Physcomitrium patens HOM05D022175 ORTHO05D014010 9.0e-07 59.3 286 25.5
PGR014G0003 Punica granatum HOM05D000053 ORTHO05D000035 9.0e-07 59.3 446 27.4
TAR374G1085 Trochodendron aralioides HOM05D000071 ORTHO05D000029 9.0e-07 59.3 150 32.0
Eucgr.E00148 Eucalyptus grandis HOM05D000053 ORTHO05D000035 1.2e-06 58.9 122 32.8
QL01p027172 Quercus lobata HOM05D000053 ORTHO05D000035 1.2e-06 58.9 132 29.5
Migut.H02487 Erythranthe guttata HOM05D001705 ORTHO05D002725 1.5e-06 58.5 140 30.0
ATR0618G306 Amborella trichopoda HOM05D000053 ORTHO05D000448 2.0e-06 58.2 136 30.9
Potri.012G005600 Populus trichocarpa HOM05D000053 ORTHO05D000035 2.0e-06 58.2 262 24.0
ECA246G2311 Erigeron canadensis HOM05D000042 ORTHO05D000980 2.6e-06 57.8 128 28.1
PSO675G6176 Papaver somniferum HOM05D001705 ORTHO05D002725 2.6e-06 57.8 147 28.6
RcHm_v2.0_Chr0c22g0500431 Rosa chinensis HOM05D000071 ORTHO05D000029 2.6e-06 57.8 146 30.1
RcHm_v2.0_Chr7g0206921 Rosa chinensis HOM05D000071 ORTHO05D000029 2.6e-06 57.8 146 30.1
RcHm_v2.0_Chr7g0207201 Rosa chinensis HOM05D000071 ORTHO05D000029 2.6e-06 57.8 146 30.1
RcHm_v2.0_Chr7g0216021 Rosa chinensis HOM05D000071 ORTHO05D000029 3.4e-06 57.4 138 32.6
SEGI_23430 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 3.4e-06 57.4 246 24.0
COL.COLO4_21972 Corchorus olitorius HOM05D001705 ORTHO05D002725 4.5e-06 57.0 118 30.5
Gorai.005G028900 Gossypium raimondii HOM05D000053 ORTHO05D000448 4.5e-06 57.0 490 24.3
Nitab4.5_0006118g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000448 4.5e-06 57.0 90 38.9
Sed0025590 Sechium edule HOM05D000053 ORTHO05D000035 4.5e-06 57.0 138 28.3
AagrBONN_evm.TU.Sc2ySwM_344.5066 Anthoceros agrestis HOM05D000041 ORTHO05D013161 5.8e-06 56.6 216 22.7
Potri.007G016700 Populus trichocarpa HOM05D001705 ORTHO05D002725 5.8e-06 56.6 139 28.1
CAN.G575.8 Capsicum annuum HOM05D000053 ORTHO05D000035 7.6e-06 56.2 85 41.2
Cpa.g.sc120.26 Carica papaya HOM05D000053 ORTHO05D000448 7.6e-06 56.2 121 31.4
CsaV3_1G010020 Cucumis sativus L. HOM05D000071 ORTHO05D000029 7.6e-06 56.2 158 28.5
HanXRQChr16g0530911 Helianthus annuus HOM05D001705 ORTHO05D002725 7.6e-06 56.2 123 28.5
PSO541G4650 Papaver somniferum HOM05D001705 ORTHO05D002725 7.6e-06 56.2 136 29.4
RcHm_v2.0_Chr7g0206761 Rosa chinensis HOM05D000071 ORTHO05D000029 7.6e-06 56.2 121 33.9
Sabra05G0096800 Salix brachista HOM05D001705 ORTHO05D002725 7.6e-06 56.2 127 29.9
Eucgr.E01223 Eucalyptus grandis HOM05D000053 ORTHO05D000035 1.0e-05 55.8 124 29.8
HanXRQChr10g0299961 Helianthus annuus HOM05D000053 ORTHO05D000448 1.0e-05 55.8 88 37.5
Lj2C70G15 Lonicera japonica HOM05D000053 ORTHO05D000448 1.0e-05 55.8 120 31.7
Nn5g29193 Nelumbo nucifera HOM05D001705 ORTHO05D002725 1.0e-05 55.8 114 30.7


User provided reference genes

Program Settings