Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 4.2e-231 804.3 391 100.0
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 2.4e-114 416.4 370 55.4
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 2.3e-112 409.8 381 53.5
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 4.0e-109 399.1 387 51.7
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 9.3e-98 361.3 381 47.2
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 2.1e-97 360.1 378 47.9
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 1.9e-95 353.6 390 44.1
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 1.6e-94 350.5 383 44.6
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 1.6e-94 350.5 394 44.7
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 4.8e-94 349.0 394 44.4
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 1.8e-93 347.1 385 46.2
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 2.4e-93 346.7 402 43.8
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 3.1e-93 346.3 374 46.0
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 6.9e-93 345.1 376 45.5
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 9.0e-93 344.7 385 44.7
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 3.4e-92 342.8 380 44.5
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 7.7e-92 341.7 389 45.2
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 1.7e-91 340.5 380 44.5
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 1.7e-91 340.5 386 44.0
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 1.7e-91 340.5 386 44.0
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 1.7e-91 340.5 383 43.6
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 2.2e-91 340.1 383 43.9
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 6.5e-91 338.6 381 43.8
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 1.4e-90 337.4 390 43.1
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 2.5e-90 336.7 383 43.3
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 4.2e-90 335.9 379 44.1
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.7e-89 333.2 390 43.6
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 3.6e-89 332.8 382 44.2
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 3.6e-89 332.8 383 42.8
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 6.1e-89 332.0 386 43.8
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 7.9e-89 331.6 382 43.7
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 7.9e-89 331.6 384 43.2
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 1.0e-88 331.3 382 42.7
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 1.0e-88 331.3 379 44.9
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 1.8e-88 330.5 376 42.3
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 3.0e-88 329.7 382 44.8
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 3.9e-88 329.3 376 42.8
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 3.9e-88 329.3 379 44.9
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 6.7e-88 328.6 388 44.1
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 3.3e-87 326.2 377 44.3
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 5.7e-87 325.5 366 45.1
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 1.3e-86 324.3 379 44.3
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 1.7e-86 323.9 374 42.8
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.7e-86 323.9 382 44.5
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 1.7e-86 323.9 375 43.5
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 4.8e-86 322.4 385 43.4
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 8.2e-86 321.6 379 44.1
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 8.2e-86 321.6 376 43.9
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.4e-85 320.9 380 43.7
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 2.4e-85 320.1 382 41.9
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 3.1e-85 319.7 380 43.4
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 3.1e-85 319.7 375 43.7
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 9.1e-85 318.2 380 43.2
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 9.1e-85 318.2 392 41.1
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 9.1e-85 318.2 387 42.6
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 1.5e-84 317.4 383 42.6
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 2.0e-84 317.0 381 43.3
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 2.0e-84 317.0 384 42.7
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 3.4e-84 316.2 387 42.4
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 4.5e-84 315.8 381 43.0
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 1.0e-83 314.7 391 42.2
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 1.0e-83 314.7 391 41.2
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 3.8e-83 312.8 379 43.0
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 5.0e-83 312.4 385 41.3
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 5.0e-83 312.4 374 43.6
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 8.5e-83 311.6 412 40.5
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 1.1e-82 311.2 385 41.6
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 1.9e-82 310.5 383 42.8
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 1.9e-82 310.5 376 41.8
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 4.2e-82 309.3 382 40.1
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 4.2e-82 309.3 380 41.8
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 5.5e-82 308.9 378 43.4
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 7.2e-82 308.5 386 41.2
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 9.4e-82 308.1 380 42.9
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 9.4e-82 308.1 380 42.9
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 2.7e-81 306.6 385 42.3
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 4.7e-81 305.8 432 38.7
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 6.1e-81 305.4 379 42.2
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 7.9e-81 305.1 385 40.8
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 6.7e-80 302.0 375 41.1
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 8.8e-80 301.6 346 43.6
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 1.1e-79 301.2 382 41.6
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 1.5e-79 300.8 356 43.0
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 2.6e-79 300.1 356 42.7
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 9.7e-79 298.1 374 41.4
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 4.8e-78 295.8 326 44.8
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 1.4e-77 294.3 379 41.2
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 5.3e-77 292.4 380 40.3
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 1.3e-75 287.7 374 40.9
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 6.5e-75 285.4 357 40.6
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 8.5e-75 285.0 383 39.7
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 1.9e-74 283.9 374 40.1
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 5.5e-74 282.3 381 40.2
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 1.6e-73 280.8 358 41.3
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 2.6e-71 273.5 379 38.0
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 2.2e-70 270.4 368 40.5
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 2.7e-68 263.5 398 38.2
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 1.9e-66 257.3 340 40.6
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.2e-63 248.1 374 37.7
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 2.6e-63 246.9 374 37.4
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 4.4e-63 246.1 392 37.0
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 1.4e-61 241.1 258 46.1
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 2.4e-61 240.4 380 36.1
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 2.4e-61 240.4 282 42.2
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 2.2e-59 233.8 295 43.4
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 6.5e-59 232.3 309 38.8
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 2.3e-56 223.8 303 38.9
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 3.0e-56 223.4 397 32.0
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 5.4e-53 212.6 308 37.3
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 1.2e-49 201.4 224 43.8
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 2.1e-49 200.7 342 36.0
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 8.0e-49 198.7 264 39.8
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 1.4e-48 198.0 176 50.0
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 2.3e-48 197.2 219 45.2
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 6.8e-48 195.7 286 36.0
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 5.8e-31 139.4 178 40.4
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 7.8e-28 129.0 151 44.4
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 8.1e-25 119.0 172 39.5
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 6.9e-16 89.4 97 42.3
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 1.5e-15 88.2 113 38.9
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 1.9e-13 81.3 140 35.0
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 6.0e-12 76.3 124 33.9
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 1.6e-09 68.2 44 63.6
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 3.8e-06 57.0 57 49.1


User provided reference genes

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