Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0064s0090 Marchantia polymorpha HOM05D006544 ORTHO05D008757 1.9e-133 479.2 247 100.0
SEGI_38453 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 7.3e-72 274.6 172 76.2
Pp3c13_11800 Physcomitrium patens HOM05D006544 ORTHO05D008757 1.8e-70 270.0 179 75.4
Psat6g072960 Pisum sativum HOM05D006544 ORTHO05D008757 4.4e-69 265.4 202 65.3
QL07p043583 Quercus lobata HOM05D006544 ORTHO05D008757 1.7e-68 263.5 192 66.7
TPR.G11258 Trifolium pratense HOM05D006544 ORTHO05D008757 3.7e-68 262.3 173 71.7
Duzib093G0756 Durio zibethinus HOM05D006544 ORTHO05D008757 4.9e-68 261.9 173 72.8
TWI74G1602 Tripterygium wilfordii HOM05D006544 ORTHO05D008757 4.9e-68 261.9 173 72.8
CAN.G1169.17 Capsicum annuum HOM05D006544 ORTHO05D008757 1.4e-67 260.4 192 65.1
Solyc10g084040.2 Solanum lycopersicum HOM05D006544 ORTHO05D008757 1.9e-67 260.0 204 63.7
Ciclev10012670m.g Citrus clementina HOM05D006544 ORTHO05D008757 2.4e-67 259.6 173 72.8
GSVIVG01025731001 Vitis vinifera HOM05D006544 ORTHO05D008757 2.4e-67 259.6 174 71.3
Lj5g0006333 Lotus japonicus HOM05D006544 ORTHO05D008757 4.1e-67 258.8 173 71.1
Sopen10g033470 Solanum pennellii HOM05D006544 ORTHO05D008757 4.1e-67 258.8 189 66.7
PSO801G0526 Papaver somniferum HOM05D006544 ORTHO05D008757 5.4e-67 258.5 173 69.4
Potri.016G092300 Populus trichocarpa HOM05D006544 ORTHO05D008757 5.4e-67 258.5 173 70.5
PGSC0003DMG400010472 Solanum tuberosum HOM05D006544 ORTHO05D008757 5.4e-67 258.5 206 62.6
Ca_11495_v3 Cicer arietinum L. HOM05D006544 ORTHO05D008757 7.0e-67 258.1 173 71.1
Thhalv10014610m.g Eutrema salsugineum HOM05D006544 ORTHO05D008757 7.0e-67 258.1 173 71.7
Nitab4.5_0000063g0030 Nicotiana tabacum HOM05D006544 ORTHO05D008757 7.0e-67 258.1 196 64.8
Lalb_Chr06g0171711 Lupinus albus HOM05D006544 ORTHO05D008757 9.2e-67 257.7 174 73.0
CiPaw.09G172700 Carya illinoinensis HOM05D006544 ORTHO05D008757 1.2e-66 257.3 177 68.9
Cc06_g04210 Coffea canephora HOM05D006544 ORTHO05D008757 1.2e-66 257.3 173 69.9
PSO339G0933 Papaver somniferum HOM05D006544 ORTHO05D008757 1.2e-66 257.3 173 68.8
Sc02g0001640 Simmondsia chinensis HOM05D006544 ORTHO05D008757 1.2e-66 257.3 172 71.5
Thecc.05G065700 Theobroma cacao HOM05D006544 ORTHO05D008757 1.2e-66 257.3 173 71.7
Nn2g11585 Nelumbo nucifera HOM05D006544 ORTHO05D008757 1.6e-66 256.9 212 62.3
RcHm_v2.0_Chr3g0470171 Rosa chinensis HOM05D006544 ORTHO05D008757 1.6e-66 256.9 196 64.8
VMungo0720G1694 Vigna mungo HOM05D006544 ORTHO05D008757 2.0e-66 256.5 171 73.1
DCAR_020819 Daucus carota HOM05D006544 ORTHO05D008757 2.7e-66 256.1 173 70.5
Gohir.A09G147100 Gossypium hirsutum HOM05D006544 ORTHO05D008757 3.5e-66 255.8 189 67.2
SMO118G0079 Selaginella moellendorffii HOM05D006544 ORTHO05D008757 3.5e-66 255.8 147 79.6
Aqoxy2G01774 Aquilegia oxysepala HOM05D006544 ORTHO05D008757 4.6e-66 255.4 199 63.3
MD12G1113500 Malus domestica HOM05D006544 ORTHO05D008757 4.6e-66 255.4 204 61.3
Phvul.007G219800 Phaseolus vulgaris HOM05D006544 ORTHO05D008757 4.6e-66 255.4 191 66.5
PGR004G0128 Punica granatum HOM05D006544 ORTHO05D008757 4.6e-66 255.4 172 69.2
BcaC03g13011 Brassica carinata HOM05D006544 ORTHO05D008757 7.8e-66 254.6 171 70.2
Dinv37314 Davidia involucrata HOM05D006544 ORTHO05D008757 7.8e-66 254.6 173 70.5
Gohir.D09G142700 Gossypium hirsutum HOM05D006544 ORTHO05D008757 7.8e-66 254.6 173 69.4
TAR636G3123 Trochodendron aralioides HOM05D006544 ORTHO05D008757 7.8e-66 254.6 173 70.5
MBI18_g04983_MAGBIO Magnolia biondii HOM05D006544 ORTHO05D008757 1.0e-65 254.2 185 68.6
AL8G27480 Arabidopsis lyrata HOM05D006544 ORTHO05D008757 1.3e-65 253.8 173 70.5
arahy.Tifrunner.gnm1.ann1.4P9CL0 Arachis hypogaea HOM05D006544 ORTHO05D008757 1.3e-65 253.8 230 56.1
arahy.Tifrunner.gnm1.ann1.8Z8BZM Arachis hypogaea HOM05D006544 ORTHO05D008757 1.3e-65 253.8 230 56.1
Glyma.10G056700 Glycine max HOM05D006544 ORTHO05D008757 1.3e-65 253.8 174 70.7
THA.LOC104816347 Tarenaya hassleriana HOM05D006544 ORTHO05D008757 1.3e-65 253.8 173 70.5
Cfa017605 Carpinus fangiana HOM05D006544 ORTHO05D008757 1.7e-65 253.4 170 70.0
Sp6g39380 Schrenkiella parvula HOM05D006544 ORTHO05D008757 1.7e-65 253.4 173 70.5
Medtr1g063350 Medicago truncatula HOM05D006544 ORTHO05D008757 2.3e-65 253.1 200 63.5
ATR1093G019 Amborella trichopoda HOM05D006544 ORTHO05D008757 3.0e-65 252.7 187 66.8
Nitab4.5_0010279g0020 Nicotiana tabacum HOM05D006544 ORTHO05D008757 3.0e-65 252.7 147 77.6
Aa31LG1G21780 Aethionema arabicum HOM05D006544 ORTHO05D008757 3.9e-65 252.3 185 67.0
EL10Ac7g16625 Beta vulgaris HOM05D006544 ORTHO05D008757 3.9e-65 252.3 170 68.8
ClCG04G009280 Citrullus lanatus HOM05D006544 ORTHO05D008757 3.9e-65 252.3 171 71.3
BcaB05g21832 Brassica carinata HOM05D006544 ORTHO05D008757 5.0e-65 251.9 171 69.0
Migut.L01701 Erythranthe guttata HOM05D006544 ORTHO05D008757 6.6e-65 251.5 200 62.5
FvH4_6g16320 Fragaria vesca HOM05D006544 ORTHO05D008757 8.6e-65 251.1 173 69.4
MELO3C024463.2 Cucumis melo HOM05D006544 ORTHO05D008757 1.1e-64 250.8 171 70.8
HanXRQChr13g0401051 Helianthus annuus HOM05D006544 ORTHO05D008757 1.1e-64 250.8 173 68.2
Sed0018427 Sechium edule HOM05D006544 ORTHO05D008757 1.5e-64 250.4 173 69.9
unitig_578.g16041 Utricularia gibba HOM05D006544 ORTHO05D008757 1.5e-64 250.4 185 64.3
C02p01030 Brassica napus HOM05D006544 ORTHO05D008757 1.9e-64 250.0 172 69.8
CANSAT80G1747 Cannabis sativa HOM05D006544 ORTHO05D008757 1.9e-64 250.0 172 69.8
CsaV3_6G039870 Cucumis sativus L. HOM05D006544 ORTHO05D008757 2.5e-64 249.6 173 69.9
SalBow5G2848 Salvia bowleyana HOM05D006544 ORTHO05D008757 2.5e-64 249.6 181 66.3
SGA_v2.0_scaffold224G42946 Striga asiatica HOM05D006544 ORTHO05D008757 2.5e-64 249.6 185 64.9
HPP92_009890 Vanilla planifolia HOM05D006544 ORTHO05D008757 2.5e-64 249.6 172 68.6
FAN05G5519 Fragaria x ananassa HOM05D006544 ORTHO05D008757 3.3e-64 249.2 176 67.6
Manes.09G066600 Manihot esculenta HOM05D006544 ORTHO05D008757 3.3e-64 249.2 178 65.7
COL.COLO4_26969 Corchorus olitorius HOM05D006544 ORTHO05D008757 4.3e-64 248.8 199 62.8
BolC2t06093H Brassica oleracea HOM05D006544 ORTHO05D008757 5.6e-64 248.4 172 69.2
Gorai.006G164200 Gossypium raimondii HOM05D006544 ORTHO05D008757 5.6e-64 248.4 178 67.4
AT5G52970 Arabidopsis thaliana HOM05D006544 ORTHO05D008757 7.3e-64 248.1 173 69.9
AUR62040358 Chenopodium quinoa HOM05D006544 ORTHO05D008757 9.5e-64 247.7 147 75.5
Actinidia28904 Actinidia chinensis HOM05D006544 ORTHO05D008757 1.6e-63 246.9 183 66.1
Lj2A122G33 Lonicera japonica HOM05D006544 ORTHO05D008757 1.6e-63 246.9 147 75.5
Lsat_1_v5_gn_6_25121 Lactuca sativa HOM05D006544 ORTHO05D008757 2.1e-63 246.5 171 67.3
Peaxi162Scf00311g00059 Petunia axillaris HOM05D006544 ORTHO05D008757 2.1e-63 246.5 204 60.8
BraA02t04758Z Brassica rapa HOM05D006544 ORTHO05D008757 4.7e-63 245.4 155 73.5
FAN09G3810 Fragaria x ananassa HOM05D006544 ORTHO05D008757 4.7e-63 245.4 227 55.5
AagrBONN_evm.TU.Sc2ySwM_228.4577 Anthoceros agrestis HOM05D006544 ORTHO05D008757 8.1e-63 244.6 157 75.2
Carub.0008s1316 Capsella rubella HOM05D006544 ORTHO05D008757 1.1e-62 244.2 225 57.3
ECA233G4064 Erigeron canadensis HOM05D006544 ORTHO05D008757 1.1e-62 244.2 170 67.1
FAN14G3080 Fragaria x ananassa HOM05D006544 ORTHO05D008757 1.4e-62 243.8 166 69.3
Oeu016983.1 Olea europaea HOM05D006544 ORTHO05D008757 1.4e-62 243.8 191 63.4
CBR_g11899 Chara braunii HOM05D006544 ORTHO05D008757 2.3e-62 243.0 209 59.8
Ah.15g092510 Amaranthus hybridus HOM05D006544 ORTHO05D008757 3.1e-62 242.7 184 64.7
MSTRG.10320 Avicennia marina HOM05D006544 ORTHO05D008757 5.2e-62 241.9 171 66.7
vmacro07290 Vaccinium macrocarpon HOM05D006544 ORTHO05D008757 5.2e-62 241.9 147 74.8
Eucgr.A01683 Eucalyptus grandis HOM05D006544 ORTHO05D008757 8.9e-62 241.1 249 52.6
AUR62042496 Chenopodium quinoa HOM05D006544 ORTHO05D008757 2.6e-61 239.6 223 56.5
CARHR265950 Cardamine hirsuta HOM05D006544 ORTHO05D008757 9.8e-61 237.7 147 74.8
Zm00001eb088350 Zea mays HOM05D006544 ORTHO05D008757 1.3e-60 237.3 169 66.3
CDE09G0170 Ceratophyllum demersum HOM05D006544 ORTHO05D008757 1.9e-59 233.4 173 63.6
Cre15.g636050 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D008757 5.4e-59 231.9 202 59.9
Sabra16G0097900 Salix brachista HOM05D006544 ORTHO05D008757 3.6e-55 219.2 292 45.2
AagrBONN_evm.TU.Sc2ySwM_344.816 Anthoceros agrestis HOM05D006544 ORTHO05D008757 6.2e-55 218.4 122 82.8
SEGI_20985 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 4.4e-53 212.2 122 79.5
Prupe.6G232400 Prunus persica HOM05D006544 ORTHO05D008757 1.3e-52 210.7 142 70.4
Rhsim03G0092100 Rhododendron simsii HOM05D006544 ORTHO05D008757 9.2e-51 204.5 228 47.8
Cpa.g.sc54.75 Carica papaya HOM05D006544 ORTHO05D008757 7.8e-50 201.4 118 75.4
PRCOL_00002491 Prasinoderma coloniale HOM05D006544 ORTHO05D008757 2.5e-48 196.4 152 61.8
MCO09G250 Micromonas commoda HOM05D006544 ORTHO05D008757 2.4e-46 189.9 209 47.8
Os07g0534000 Oryza sativa ssp. japonica HOM05D006544 ORTHO05D008757 2.4e-38 163.3 116 63.8
Lj5g0024591 Lotus japonicus HOM05D006544 ORTHO05D008757 1.7e-36 157.1 94 72.3
Cpa.g.sc4277.1 Carica papaya HOM05D006544 ORTHO05D008757 4.2e-35 152.5 115 63.5
Cpa.g.sc54.73 Carica papaya HOM05D006544 ORTHO05D008757 4.2e-35 152.5 115 63.5
CSS0000889 Camellia sinensis var. sinensis HOM05D006544 ORTHO05D008757 1.3e-28 131.0 83 66.3
HPP92_009894 Vanilla planifolia HOM05D006544 ORTHO05D008757 3.1e-22 109.8 65 73.8
CBR_g20266 Chara braunii HOM05D006544 ORTHO05D021234 9.0e-22 108.2 166 36.7
Medtr5g037320 Medicago truncatula HOM05D006544 ORTHO05D008757 7.6e-21 105.1 116 53.4
AagrBONN_evm.TU.Sc2ySwM_368.258 Anthoceros agrestis HOM05D006544 ORTHO05D021234 8.4e-20 101.7 129 37.2
Hund20313 Selenicereus undatus HOM05D006544 ORTHO05D008757 1.3e-17 94.4 74 62.2
SEGI_36386 Sequoiadendron giganteum HOM05D006544 ORTHO05D021234 3.3e-16 89.7 127 37.0
SalBow5G0971 Salvia bowleyana HOM05D008540 ORTHO05D009454 6.9e-14 82.0 48 70.8
Nn2g13777 Nelumbo nucifera HOM05D006544 ORTHO05D008757 1.2e-10 71.2 53 62.3
Cre03.g154600 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D021234 2.3e-09 67.0 163 27.6
PRCOL_00006412 Prasinoderma coloniale HOM05D006544 ORTHO05D021234 5.1e-09 65.9 177 31.1
MCO12G278 Micromonas commoda HOM05D006544 ORTHO05D021234 3.7e-07 59.7 121 26.4
HPP92_009893 Vanilla planifolia HOM05D006544 ORTHO05D008757 5.3e-06 55.8 52 57.7
Cpa.g.sc54.74 Carica papaya HOM05D006544 ORTHO05D008757 6.9e-06 55.5 51 58.8


User provided reference genes

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