Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0064s0064 Marchantia polymorpha HOM05D007650 ORTHO05D009695 3.1e-174 615.1 340 100.0
SMO174G0197 Selaginella moellendorffii HOM05D007650 ORTHO05D009695 4.6e-93 345.5 294 67.0
AagrBONN_evm.TU.Sc2ySwM_117.3317 Anthoceros agrestis HOM05D007650 ORTHO05D009695 7.4e-91 338.2 288 66.3
MBI07_g15281_MAGBIO Magnolia biondii HOM05D007650 ORTHO05D009695 7.1e-86 321.6 240 72.1
Os05g0565400 Oryza sativa ssp. japonica HOM05D007650 ORTHO05D009695 1.3e-84 317.4 279 63.8
TAR629G0225 Trochodendron aralioides HOM05D007650 ORTHO05D009695 1.3e-84 317.4 250 69.2
Duzib192G0135 Durio zibethinus HOM05D007650 ORTHO05D009695 5.1e-84 315.5 298 62.1
CAN.G257.1 Capsicum annuum HOM05D007650 ORTHO05D009695 6.7e-84 315.1 245 69.4
Hma1.2p1_0137F.1_g062480 Hydrangea macrophylla HOM05D007650 ORTHO05D009695 1.9e-83 313.5 245 69.0
Atru.chr10.1319 Acer truncatum HOM05D007650 ORTHO05D009695 2.5e-83 313.2 247 68.4
CDE02G4320 Ceratophyllum demersum HOM05D007650 ORTHO05D009695 2.5e-83 313.2 283 64.0
Cfa000966 Carpinus fangiana HOM05D007650 ORTHO05D009695 3.3e-83 312.8 236 71.6
MELO3C007146.2 Cucumis melo HOM05D007650 ORTHO05D009695 3.3e-83 312.8 236 72.0
ECA234G0548 Erigeron canadensis HOM05D007650 ORTHO05D009695 3.3e-83 312.8 248 68.5
PGSC0003DMG400008313 Solanum tuberosum HOM05D007650 ORTHO05D009695 4.3e-83 312.4 267 65.2
Haze_05565 Corylus avellana HOM05D007650 ORTHO05D009695 5.7e-83 312.0 236 72.0
Eucgr.D00307 Eucalyptus grandis HOM05D007650 ORTHO05D009695 5.7e-83 312.0 245 70.2
Lsat_1_v5_gn_4_30200 Lactuca sativa HOM05D007650 ORTHO05D009695 5.7e-83 312.0 246 69.1
Sopen02g019910 Solanum pennellii HOM05D007650 ORTHO05D009695 5.7e-83 312.0 267 64.4
TWI09G0653 Tripterygium wilfordii HOM05D007650 ORTHO05D009695 5.7e-83 312.0 260 67.7
CsaV3_6G051610 Cucumis sativus L. HOM05D007650 ORTHO05D009695 9.6e-83 311.2 236 71.6
Manes.17G068200 Manihot esculenta HOM05D007650 ORTHO05D009695 9.6e-83 311.2 253 67.6
EL10As10g23973 Beta vulgaris HOM05D007650 ORTHO05D009695 1.3e-82 310.8 238 70.6
Dinv30717 Davidia involucrata HOM05D007650 ORTHO05D009695 1.3e-82 310.8 245 67.8
Peaxi162Scf00796g00117 Petunia axillaris HOM05D007650 ORTHO05D009695 1.3e-82 310.8 245 68.2
Sopen02g019890 Solanum pennellii HOM05D007650 ORTHO05D009695 1.3e-82 310.8 267 64.0
DCAR_005107 Daucus carota HOM05D007650 ORTHO05D009695 1.6e-82 310.5 274 63.9
Thecc.06G153200 Theobroma cacao HOM05D007650 ORTHO05D009695 1.6e-82 310.5 299 61.9
Gohir.A06G197300 Gossypium hirsutum HOM05D007650 ORTHO05D009695 3.7e-82 309.3 294 61.6
FvH4_3g05890 Fragaria vesca HOM05D007650 ORTHO05D009695 6.2e-82 308.5 248 67.7
HanXRQChr17g0565021 Helianthus annuus HOM05D007650 ORTHO05D009695 6.2e-82 308.5 305 59.3
QL05p059009 Quercus lobata HOM05D007650 ORTHO05D009695 1.4e-81 307.4 241 71.4
vmacro09097 Vaccinium macrocarpon HOM05D007650 ORTHO05D009695 1.4e-81 307.4 285 63.2
CiPaw.09G126000 Carya illinoinensis HOM05D007650 ORTHO05D009695 1.8e-81 307.0 236 71.2
Ca_18274_v3 Cicer arietinum L. HOM05D007650 ORTHO05D009695 1.8e-81 307.0 236 70.3
FAN21G2668 Fragaria x ananassa HOM05D007650 ORTHO05D009695 1.8e-81 307.0 298 60.1
Zm00001eb296000 Zea mays HOM05D007650 ORTHO05D009695 2.4e-81 306.6 278 62.9
FAN11G2937 Fragaria x ananassa HOM05D007650 ORTHO05D009695 3.1e-81 306.2 248 67.3
FAN16G2223 Fragaria x ananassa HOM05D007650 ORTHO05D009695 3.1e-81 306.2 248 66.9
Potri.011G080900 Populus trichocarpa HOM05D007650 ORTHO05D009695 3.1e-81 306.2 269 64.7
Cc09_g08850 Coffea canephora HOM05D007650 ORTHO05D009695 5.3e-81 305.4 261 65.1
Migut.H01373 Erythranthe guttata HOM05D007650 ORTHO05D009695 5.3e-81 305.4 263 63.9
TPR.G4852 Trifolium pratense HOM05D007650 ORTHO05D009695 5.3e-81 305.4 236 70.3
Actinidia16723 Actinidia chinensis HOM05D007650 ORTHO05D009695 6.9e-81 305.1 300 59.3
Lj4g0007964 Lotus japonicus HOM05D007650 ORTHO05D009695 6.9e-81 305.1 239 69.0
MD05G1286900 Malus domestica HOM05D007650 ORTHO05D009695 6.9e-81 305.1 250 66.4
PGR083G1882 Punica granatum HOM05D007650 ORTHO05D009695 6.9e-81 305.1 242 69.4
Aqoxy4G00120 Aquilegia oxysepala HOM05D007650 ORTHO05D009695 9.0e-81 304.7 242 67.4
Gorai.010G238900 Gossypium raimondii HOM05D007650 ORTHO05D009695 9.0e-81 304.7 298 61.4
Lj1A1185T62 Lonicera japonica HOM05D007650 ORTHO05D009695 9.0e-81 304.7 258 65.9
Medtr4g094625 Medicago truncatula HOM05D007650 ORTHO05D009695 9.0e-81 304.7 236 70.3
Gohir.D06G204800 Gossypium hirsutum HOM05D007650 ORTHO05D009695 1.2e-80 304.3 301 60.8
Glyma.05G129100 Glycine max HOM05D007650 ORTHO05D009695 2.0e-80 303.5 244 68.0
RcHm_v2.0_Chr5g0013551 Rosa chinensis HOM05D007650 ORTHO05D009695 2.0e-80 303.5 240 67.9
Psat7g090640 Pisum sativum HOM05D007650 ORTHO05D009695 2.6e-80 303.1 280 62.1
SalBow7G1373 Salvia bowleyana HOM05D007650 ORTHO05D009695 3.4e-80 302.8 250 66.8
arahy.Tifrunner.gnm1.ann1.IH3VZP Arachis hypogaea HOM05D007650 ORTHO05D009695 4.5e-80 302.4 236 69.9
Hund21519 Selenicereus undatus HOM05D007650 ORTHO05D009695 1.7e-79 300.4 261 62.8
Lalb_Chr07g0188691 Lupinus albus HOM05D007650 ORTHO05D009695 2.9e-79 299.7 236 68.6
Nn3g20684 Nelumbo nucifera HOM05D007650 ORTHO05D009695 2.9e-79 299.7 313 57.8
Sabra11G0064400 Salix brachista HOM05D007650 ORTHO05D009695 2.9e-79 299.7 247 66.8
Phvul.002G194800 Phaseolus vulgaris HOM05D007650 ORTHO05D009695 3.8e-79 299.3 290 60.0
Glyma.08G083700 Glycine max HOM05D007650 ORTHO05D009695 8.4e-79 298.1 257 65.4
Sc17g0005010 Simmondsia chinensis HOM05D007650 ORTHO05D009695 1.4e-78 297.4 249 65.5
Rhsim13G0193900 Rhododendron simsii HOM05D007650 ORTHO05D009695 2.5e-78 296.6 314 56.4
CANSAT35G2040 Cannabis sativa HOM05D007650 ORTHO05D009695 4.2e-78 295.8 293 58.4
VMungo0251G1744 Vigna mungo HOM05D007650 ORTHO05D009695 7.1e-78 295.0 283 60.8
Nitab4.5_0001040g0130 Nicotiana tabacum HOM05D007650 ORTHO05D009695 1.2e-77 294.3 245 66.1
Nitab4.5_0001655g0220 Nicotiana tabacum HOM05D007650 ORTHO05D009695 1.2e-77 294.3 245 66.5
HPP92_024569 Vanilla planifolia HOM05D007650 ORTHO05D009695 2.1e-77 293.5 233 67.4
arahy.Tifrunner.gnm1.ann1.HZCZ32 Arachis hypogaea HOM05D007650 ORTHO05D009695 4.6e-77 292.4 244 67.2
Oeu040111.1 Olea europaea HOM05D007650 ORTHO05D009695 1.0e-76 291.2 260 62.3
unitig_21.g20640 Utricularia gibba HOM05D007650 ORTHO05D009695 1.0e-76 291.2 238 65.1
Pp3c2_34550 Physcomitrium patens HOM05D007650 ORTHO05D009695 1.8e-76 290.4 248 64.5
ClCG01G024480 Citrullus lanatus HOM05D007650 ORTHO05D009695 4.5e-72 275.8 236 67.4
AUR62030238 Chenopodium quinoa HOM05D007650 ORTHO05D009695 1.9e-70 270.4 261 59.8
COL.COLO4_38298 Corchorus olitorius HOM05D007650 ORTHO05D009695 2.3e-68 263.5 294 56.8
CBR_g31268 Chara braunii HOM05D007650 ORTHO05D009695 1.3e-66 257.7 251 55.4
ATR0585G132 Amborella trichopoda HOM05D007650 ORTHO05D009695 6.1e-61 238.8 180 71.1
AUR62027602 Chenopodium quinoa HOM05D007650 ORTHO05D009695 3.3e-59 233.0 262 53.8
Prupe.4G078000 Prunus persica HOM05D007650 ORTHO05D009695 1.9e-54 217.2 292 47.6
Solyc02g070800.2 Solanum lycopersicum HOM05D007650 ORTHO05D009695 3.6e-53 213.0 163 68.7
Sed0021228 Sechium edule HOM05D007650 ORTHO05D009695 4.7e-53 212.6 227 56.8
TAR629G3449 Trochodendron aralioides HOM05D007650 ORTHO05D009695 7.2e-46 188.7 235 50.6
Actinidia19514 Actinidia chinensis HOM05D007650 ORTHO05D009695 1.7e-39 167.5 128 71.9
GSVIVG01021423001 Vitis vinifera HOM05D007650 ORTHO05D009695 7.2e-38 162.2 137 66.4
Ah.14g086550 Amaranthus hybridus HOM05D007650 ORTHO05D009695 1.2e-37 161.4 215 51.6
QL05p059017 Quercus lobata HOM05D007650 ORTHO05D009695 1.2e-35 154.8 176 56.8
Sopen02g019900 Solanum pennellii HOM05D007650 ORTHO05D009695 3.1e-33 146.7 116 69.0
HanXRQChr09g0241981 Helianthus annuus HOM05D007650 ORTHO05D009695 1.6e-24 117.9 103 62.1
Manes.15G119900 Manihot esculenta HOM05D007650 ORTHO05D009695 2.4e-17 94.0 125 46.4
CAN.G637.51 Capsicum annuum HOM05D007650 ORTHO05D009695 1.2e-13 81.6 120 44.2
TAR629G1582 Trochodendron aralioides HOM05D007650 ORTHO05D009695 1.1e-12 78.6 55 78.2
CAN.G84.7 Capsicum annuum HOM05D007650 ORTHO05D009695 8.3e-10 68.9 112 42.9
Zm00001eb089160 Zea mays HOM05D000666 ORTHO05D001431 1.9e-09 67.8 47 70.2


User provided reference genes

Program Settings