Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0064s0061 Marchantia polymorpha HOM05D008409 ORTHO05D010032 4.9e-82 307.8 156 100.0
Mapoly0040s0030 Marchantia polymorpha HOM05D000322 ORTHO05D000186 3.1e-36 155.6 152 52.0
Mapoly0034s0105 Marchantia polymorpha HOM05D000322 ORTHO05D000186 2.9e-34 149.1 152 49.3
Mapoly0008s0207 Marchantia polymorpha HOM05D008409 ORTHO05D010032 7.2e-33 144.4 151 46.4
Mapoly0064s0059 Marchantia polymorpha HOM05D008409 ORTHO05D000114 3.4e-27 125.6 153 43.1
Mapoly0063s0024 Marchantia polymorpha HOM05D008409 ORTHO05D010032 5.9e-27 124.8 155 42.6
Mapoly0064s0009 Marchantia polymorpha HOM05D008409 ORTHO05D010032 1.7e-26 123.2 153 42.5
Mapoly0063s0019 Marchantia polymorpha HOM05D001593 ORTHO05D010032 3.8e-26 122.1 155 41.3
Mapoly0063s0026 Marchantia polymorpha HOM05D008409 ORTHO05D010032 1.4e-25 120.2 165 41.2
Mapoly0063s0018 Marchantia polymorpha HOM05D001593 ORTHO05D002007 2.5e-25 119.4 154 43.5
Mapoly0063s0020 Marchantia polymorpha HOM05D001593 ORTHO05D010032 2.7e-24 115.9 155 39.4
Mapoly0064s0111 Marchantia polymorpha HOM05D000322 ORTHO05D000186 4.7e-24 115.2 150 41.3
Mapoly0063s0025 Marchantia polymorpha HOM05D000322 ORTHO05D000186 4.4e-22 108.6 158 37.3
Mapoly0127s0053 Marchantia polymorpha HOM05D000322 ORTHO05D000186 1.2e-19 100.5 151 38.4
SMO141G0029 Selaginella moellendorffii HOM05D000322 ORTHO05D000186 5.9e-11 71.6 153 35.9
SalBow7G3151 Salvia bowleyana HOM05D001593 ORTHO05D010032 2.5e-09 66.2 150 28.0
TWI38G2157 Tripterygium wilfordii HOM05D001593 ORTHO05D010032 5.5e-09 65.1 149 28.2
Haze_01118 Corylus avellana HOM05D000322 ORTHO05D000186 9.4e-09 64.3 153 31.4
HPP92_006905 Vanilla planifolia HOM05D000322 ORTHO05D000186 9.4e-09 64.3 128 31.2
Eucgr.F03348 Eucalyptus grandis HOM05D001593 ORTHO05D010032 2.7e-08 62.8 154 29.2
SEGI_03749 Sequoiadendron giganteum HOM05D000322 ORTHO05D000186 3.6e-08 62.4 147 29.3
FvH4_3g20820 Fragaria vesca HOM05D001593 ORTHO05D010032 4.7e-08 62.0 152 29.6
Aqoxy3G00934 Aquilegia oxysepala HOM05D000197 ORTHO05D000114 6.1e-08 61.6 121 34.7
HPP92_011864 Vanilla planifolia HOM05D000322 ORTHO05D000186 6.1e-08 61.6 150 26.0
Mapoly0040s0095 Marchantia polymorpha HOM05D012277 ORTHO05D000114 1.0e-07 60.8 153 30.1
PSO017G5859 Papaver somniferum HOM05D000197 ORTHO05D000114 1.4e-07 60.5 125 31.2
QL06p011120 Quercus lobata HOM05D000322 ORTHO05D000186 1.4e-07 60.5 152 30.3
SEGI_04347 Sequoiadendron giganteum HOM05D000197 ORTHO05D000114 1.4e-07 60.5 148 29.7
Cfa015466 Carpinus fangiana HOM05D000322 ORTHO05D000186 1.8e-07 60.1 158 29.1
PSO478G4376 Papaver somniferum HOM05D000197 ORTHO05D000114 1.8e-07 60.1 125 31.2
SMO367G0596 Selaginella moellendorffii HOM05D000322 ORTHO05D000114 1.8e-07 60.1 151 26.5
Peaxi162Scf00421g00328 Petunia axillaris HOM05D000197 ORTHO05D000114 3.0e-07 59.3 112 31.2
QL06p011093 Quercus lobata HOM05D000322 ORTHO05D000186 3.0e-07 59.3 152 32.9
SEGI_19703 Sequoiadendron giganteum HOM05D001593 ORTHO05D010032 3.0e-07 59.3 119 31.1
Manes.03G115300 Manihot esculenta HOM05D001593 ORTHO05D010032 4.0e-07 58.9 124 29.8
Nitab4.5_0005555g0020 Nicotiana tabacum HOM05D000197 ORTHO05D000114 4.0e-07 58.9 112 31.2
Thecc.04G291900 Theobroma cacao HOM05D000322 ORTHO05D000186 4.0e-07 58.9 154 29.9
Sabra15G0087800 Salix brachista HOM05D000322 ORTHO05D000186 6.7e-07 58.2 150 27.3
TAR622G0730 Trochodendron aralioides HOM05D000197 ORTHO05D000114 6.7e-07 58.2 153 28.1
MSTRG.9858 Avicennia marina HOM05D000322 ORTHO05D000186 8.8e-07 57.8 150 26.7
Potri.004G032900 Populus trichocarpa HOM05D000322 ORTHO05D000186 8.8e-07 57.8 128 28.9
Potri.004G033000 Populus trichocarpa HOM05D000322 ORTHO05D000186 8.8e-07 57.8 128 28.9
SMO332G0032 Selaginella moellendorffii HOM05D008409 ORTHO05D000186 8.8e-07 57.8 139 31.7
vmacro08088 Vaccinium macrocarpon HOM05D000322 ORTHO05D000186 8.8e-07 57.8 152 32.2
Haze_01113 Corylus avellana HOM05D000322 ORTHO05D000186 1.2e-06 57.4 152 30.9
Os04g0465600 Oryza sativa ssp. japonica HOM05D000197 ORTHO05D000114 1.2e-06 57.4 156 30.1
Prupe.1G127600 Prunus persica HOM05D000322 ORTHO05D000186 1.2e-06 57.4 150 28.7
Rhsim04G0231400 Rhododendron simsii HOM05D000322 ORTHO05D000186 1.2e-06 57.4 153 29.4
SMO367G1012 Selaginella moellendorffii HOM05D000322 ORTHO05D000114 1.2e-06 57.4 151 27.2
vmacro08083 Vaccinium macrocarpon HOM05D000322 ORTHO05D000186 1.2e-06 57.4 151 31.1
MD16G1161100 Malus domestica HOM05D000322 ORTHO05D000186 1.5e-06 57.0 152 27.0
QL06p011038 Quercus lobata HOM05D000322 ORTHO05D000186 1.5e-06 57.0 152 30.9
QL06p011089 Quercus lobata HOM05D000322 ORTHO05D000186 1.5e-06 57.0 152 27.6
Eucgr.H03778 Eucalyptus grandis HOM05D000322 ORTHO05D000186 2.0e-06 56.6 154 31.2
Prupe.1G126900 Prunus persica HOM05D000322 ORTHO05D000186 2.0e-06 56.6 150 28.7
Prupe.4G188400 Prunus persica HOM05D001593 ORTHO05D010032 2.0e-06 56.6 152 28.3
vmacro08086 Vaccinium macrocarpon HOM05D000322 ORTHO05D000186 2.0e-06 56.6 151 30.5
MSTRG.611 Avicennia marina HOM05D000197 ORTHO05D000114 2.6e-06 56.2 121 30.6
MD16G1160500 Malus domestica HOM05D000322 ORTHO05D000186 2.6e-06 56.2 152 25.7
Rhsim04G0230800 Rhododendron simsii HOM05D000322 ORTHO05D000186 2.6e-06 56.2 151 29.8
Lj3A826T84 Lonicera japonica HOM05D000322 ORTHO05D000186 3.3e-06 55.8 151 30.5
MD16G1160400 Malus domestica HOM05D000322 ORTHO05D000186 3.3e-06 55.8 152 25.7
QL06p011085 Quercus lobata HOM05D000322 ORTHO05D000186 3.3e-06 55.8 150 30.0
SMO114G0135 Selaginella moellendorffii HOM05D000197 ORTHO05D000114 3.3e-06 55.8 152 28.9
PGSC0003DMG400004131 Solanum tuberosum HOM05D000197 ORTHO05D000114 3.3e-06 55.8 112 32.1
HPP92_000927 Vanilla planifolia HOM05D001593 ORTHO05D010032 3.3e-06 55.8 130 27.7
Eucgr.H03975 Eucalyptus grandis HOM05D000322 ORTHO05D000186 4.4e-06 55.5 154 30.5
MD16G1161400 Malus domestica HOM05D000322 ORTHO05D000186 4.4e-06 55.5 152 26.3
Nitab4.5_0001474g0070 Nicotiana tabacum HOM05D000197 ORTHO05D000114 4.4e-06 55.5 112 29.5
QL06p011134 Quercus lobata HOM05D000322 ORTHO05D000186 4.4e-06 55.5 152 30.3
SEGI_30515 Sequoiadendron giganteum HOM05D000197 ORTHO05D000114 4.4e-06 55.5 151 25.8
unitig_22.g6474 Utricularia gibba HOM05D000197 ORTHO05D000114 7.5e-06 54.7 126 30.2
Haze_01119 Corylus avellana HOM05D000322 ORTHO05D000186 9.7e-06 54.3 152 29.6
QL06p011115 Quercus lobata HOM05D000322 ORTHO05D000186 9.7e-06 54.3 154 28.6


User provided reference genes

Program Settings