Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 4.5e-112 407.9 202 100.0
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 2.2e-18 96.7 71 59.2
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 2.9e-18 96.3 71 57.7
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 3.8e-18 95.9 82 52.4
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 6.5e-18 95.1 83 49.4
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 6.5e-18 95.1 83 49.4
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 2.5e-17 93.2 70 58.6
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 5.5e-17 92.0 70 52.9
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 9.3e-17 91.3 70 58.6
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 1.2e-16 90.9 80 50.0
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 1.2e-16 90.9 80 50.0
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 1.2e-16 90.9 75 52.0
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.2e-16 90.9 75 52.0
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.2e-16 90.9 75 52.0
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 1.6e-16 90.5 72 54.2
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 2.1e-16 90.1 68 55.9
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 2.7e-16 89.7 68 51.5
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 2.7e-16 89.7 68 51.5
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 2.7e-16 89.7 70 55.7
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 2.7e-16 89.7 70 55.7
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 2.7e-16 89.7 70 55.7
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.5e-16 89.4 75 50.7
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 4.6e-16 89.0 68 55.9
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 4.6e-16 89.0 68 55.9
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 4.6e-16 89.0 68 55.9
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 4.6e-16 89.0 68 55.9
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 4.6e-16 89.0 68 57.4
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 6.0e-16 88.6 70 51.4
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 6.0e-16 88.6 68 54.4
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 6.0e-16 88.6 68 54.4
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 6.0e-16 88.6 71 52.1
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 7.9e-16 88.2 69 53.6
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 7.9e-16 88.2 70 52.9
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 7.9e-16 88.2 70 52.9
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 7.9e-16 88.2 70 54.3
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 7.9e-16 88.2 68 54.4
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 7.9e-16 88.2 68 54.4
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 7.9e-16 88.2 68 54.4
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 1.0e-15 87.8 68 54.4
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 1.0e-15 87.8 70 52.9
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 1.0e-15 87.8 68 50.0
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 1.0e-15 87.8 66 54.5
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.0e-15 87.8 75 49.3
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.0e-15 87.8 75 49.3
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 1.0e-15 87.8 75 49.3
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 1.0e-15 87.8 77 49.4
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 1.3e-15 87.4 70 51.4
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 1.3e-15 87.4 70 51.4
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 1.3e-15 87.4 75 48.0
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.3e-15 87.4 70 50.0
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.3e-15 87.4 70 50.0
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 1.3e-15 87.4 68 54.4
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 1.3e-15 87.4 75 49.3
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 1.8e-15 87.0 68 51.5
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 1.8e-15 87.0 68 55.9
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.8e-15 87.0 68 57.4
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.8e-15 87.0 68 55.9
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 1.8e-15 87.0 68 52.9
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 1.8e-15 87.0 70 50.0
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 2.3e-15 86.7 70 50.0
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 2.3e-15 86.7 68 51.5
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 2.3e-15 86.7 68 55.9
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 3.0e-15 86.3 68 52.9
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 3.0e-15 86.3 71 52.1
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 3.0e-15 86.3 67 55.2
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 3.0e-15 86.3 70 51.4
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 3.0e-15 86.3 75 48.0
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 3.9e-15 85.9 68 51.5
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 3.9e-15 85.9 68 48.5
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 3.9e-15 85.9 70 51.4
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 5.1e-15 85.5 70 50.0
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 5.1e-15 85.5 68 52.9
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 5.1e-15 85.5 67 55.2
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 5.1e-15 85.5 68 54.4
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 5.1e-15 85.5 70 51.4
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 6.7e-15 85.1 68 55.9
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 6.7e-15 85.1 67 53.7
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 6.7e-15 85.1 68 54.4
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 6.7e-15 85.1 68 54.4
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 6.7e-15 85.1 66 56.1
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 8.7e-15 84.7 70 48.6
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 8.7e-15 84.7 67 55.2
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 8.7e-15 84.7 67 55.2
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 1.1e-14 84.3 68 51.5
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 1.1e-14 84.3 67 52.2
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 1.1e-14 84.3 72 51.4
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 1.5e-14 84.0 70 47.1
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 1.9e-14 83.6 67 52.2
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 2.5e-14 83.2 66 54.5
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 2.5e-14 83.2 68 47.1
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 3.3e-14 82.8 70 47.1
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 3.3e-14 82.8 67 50.7
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.3e-14 82.8 75 48.0
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 4.3e-14 82.4 70 48.6
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 4.3e-14 82.4 68 51.5
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 4.3e-14 82.4 70 45.7
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 4.3e-14 82.4 66 50.0
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 4.3e-14 82.4 66 53.0
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 4.3e-14 82.4 66 53.0
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 4.3e-14 82.4 67 53.7
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 4.3e-14 82.4 72 45.8
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 5.7e-14 82.0 68 51.5
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 5.7e-14 82.0 68 51.5
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 5.7e-14 82.0 68 51.5
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 5.7e-14 82.0 68 51.5
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 5.7e-14 82.0 68 51.5
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 9.6e-14 81.3 91 44.0
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 9.6e-14 81.3 91 40.7
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 9.6e-14 81.3 91 40.7
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 9.6e-14 81.3 90 41.1
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 9.6e-14 81.3 67 50.7
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 9.6e-14 81.3 70 47.1
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 1.3e-13 80.9 91 40.7
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 1.3e-13 80.9 69 49.3
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 1.3e-13 80.9 91 40.7
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.3e-13 80.9 68 50.0
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 1.6e-13 80.5 68 47.1
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 1.6e-13 80.5 67 50.7
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 4.8e-13 79.0 75 45.3
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 4.8e-13 79.0 67 52.2
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 8.2e-13 78.2 91 39.6
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 2.4e-12 76.6 51 58.8
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 3.1e-12 76.3 57 56.1
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 5.3e-12 75.5 76 50.0
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 5.3e-12 75.5 88 42.0
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 6.9e-12 75.1 70 48.6
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.0e-11 73.6 57 56.1
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 2.6e-11 73.2 57 52.6
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 1.0e-10 71.2 92 38.0
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 1.3e-10 70.9 64 50.0
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.1e-09 67.8 58 51.7
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 4.2e-09 65.9 86 38.4


User provided reference genes

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