Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0063s0094 Marchantia polymorpha HOM05D005408 ORTHO05D006790 0.0e+00 2612.0 1364 100.0
Pp3c16_10130 Physcomitrium patens HOM05D005408 ORTHO05D006790 2.0e-126 458.4 1081 32.3
AagrBONN_evm.TU.Sc2ySwM_228.3605 Anthoceros agrestis HOM05D005408 ORTHO05D006790 1.2e-115 422.5 519 43.7
SEGI_14734 Sequoiadendron giganteum HOM05D005408 ORTHO05D006790 4.7e-112 410.6 544 41.7
Atru.chr4.2004 Acer truncatum HOM05D005408 ORTHO05D006790 6.8e-111 406.8 480 42.5
Ciclev10004264m.g Citrus clementina HOM05D005408 ORTHO05D006790 1.7e-109 402.1 636 36.3
TWI09G0385 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 2.8e-109 401.4 569 37.4
TWI53G1583 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 3.7e-109 401.0 626 36.7
Peaxi162Scf00392g00730 Petunia axillaris HOM05D005408 ORTHO05D006790 4.8e-109 400.6 571 38.4
ATR0736G089 Amborella trichopoda HOM05D005408 ORTHO05D006790 6.3e-109 400.2 1012 29.8
Nn1g02867 Nelumbo nucifera HOM05D005408 ORTHO05D006790 1.1e-108 399.4 585 39.0
Nitab4.5_0000596g0060 Nicotiana tabacum HOM05D005408 ORTHO05D006790 1.4e-108 399.1 579 38.0
Aa31LG9G3050 Aethionema arabicum HOM05D005408 ORTHO05D006790 2.4e-108 398.3 522 40.4
MBI07_g31083_MAGBIO Magnolia biondii HOM05D005408 ORTHO05D006790 4.1e-108 397.5 501 43.1
TAR633G1608 Trochodendron aralioides HOM05D005408 ORTHO05D006790 5.4e-108 397.1 538 40.0
Sc19g0003230 Simmondsia chinensis HOM05D005408 ORTHO05D006790 7.0e-108 396.7 555 38.0
EL10Ac3g04981 Beta vulgaris HOM05D005408 ORTHO05D006790 1.2e-107 396.0 521 39.5
HanXRQChr11g0330791 Helianthus annuus HOM05D005408 ORTHO05D006790 1.2e-107 396.0 552 38.8
AUR62015544 Chenopodium quinoa HOM05D005408 ORTHO05D006790 2.0e-107 395.2 512 39.5
MD16G1222000 Malus domestica HOM05D005408 ORTHO05D006790 2.0e-107 395.2 502 41.6
PSO210G0343 Papaver somniferum HOM05D005408 ORTHO05D006790 2.0e-107 395.2 534 41.0
PSO832G1937 Papaver somniferum HOM05D005408 ORTHO05D006790 2.7e-107 394.8 526 39.9
Pp3c25_7300 Physcomitrium patens HOM05D005408 ORTHO05D006790 3.5e-107 394.4 569 39.9
CAN.G220.39 Capsicum annuum HOM05D005408 ORTHO05D006790 4.5e-107 394.0 580 36.9
COL.COLO4_15917 Corchorus olitorius HOM05D005408 ORTHO05D006790 4.5e-107 394.0 520 40.0
Prupe.1G042300 Prunus persica HOM05D005408 ORTHO05D006790 4.5e-107 394.0 487 41.7
AL7G41950 Arabidopsis lyrata HOM05D005408 ORTHO05D006790 1.0e-106 392.9 516 39.5
Ca_03010_v3 Cicer arietinum L. HOM05D005408 ORTHO05D006790 1.0e-106 392.9 534 40.1
Hma1.2p1_0112F.1_g054305 Hydrangea macrophylla HOM05D005408 ORTHO05D006790 1.7e-106 392.1 601 38.3
RcHm_v2.0_Chr4g0394291 Rosa chinensis HOM05D005408 ORTHO05D006790 2.3e-106 391.7 505 40.2
Sopen09g033240 Solanum pennellii HOM05D005408 ORTHO05D006790 2.9e-106 391.3 585 37.8
Solyc09g090340.3 Solanum lycopersicum HOM05D005408 ORTHO05D006790 3.8e-106 391.0 585 37.6
AT4G14310 Arabidopsis thaliana HOM05D005408 ORTHO05D006790 5.0e-106 390.6 516 39.3
Aqoxy5G00183 Aquilegia oxysepala HOM05D005408 ORTHO05D006790 6.6e-106 390.2 502 41.0
FvH4_4g04020 Fragaria vesca HOM05D005408 ORTHO05D006790 6.6e-106 390.2 526 39.7
FAN12G0827 Fragaria x ananassa HOM05D005408 ORTHO05D006790 6.6e-106 390.2 526 39.7
TAR362G0279 Trochodendron aralioides HOM05D005408 ORTHO05D006790 6.6e-106 390.2 513 39.0
Haze_11418 Corylus avellana HOM05D005408 ORTHO05D006790 1.1e-105 389.4 509 38.7
Dinv27073 Davidia involucrata HOM05D005408 ORTHO05D006790 1.5e-105 389.0 500 40.6
Eucgr.H03018 Eucalyptus grandis HOM05D005408 ORTHO05D006790 1.5e-105 389.0 501 41.1
Rhsim02G0041600 Rhododendron simsii HOM05D005408 ORTHO05D006790 1.9e-105 388.7 567 38.6
PGSC0003DMG400017212 Solanum tuberosum HOM05D005408 ORTHO05D006790 1.9e-105 388.7 533 38.8
FAN17G2537 Fragaria x ananassa HOM05D005408 ORTHO05D006790 2.5e-105 388.3 506 40.3
Lj6g0021221 Lotus japonicus HOM05D005408 ORTHO05D006790 2.5e-105 388.3 506 39.5
TPR.G25189 Trifolium pratense HOM05D005408 ORTHO05D006790 2.5e-105 388.3 529 38.8
BcaNung06103 Brassica carinata HOM05D005408 ORTHO05D006790 3.3e-105 387.9 500 40.2
Glyma.02G003800 Glycine max HOM05D005408 ORTHO05D006790 4.2e-105 387.5 522 40.2
Actinidia20821 Actinidia chinensis HOM05D005408 ORTHO05D006790 7.2e-105 386.7 555 39.5
Migut.N00286 Erythranthe guttata HOM05D005408 ORTHO05D006790 9.5e-105 386.3 576 37.2
Hund03055 Selenicereus undatus HOM05D005408 ORTHO05D006790 9.5e-105 386.3 599 35.4
Thhalv10024359m.g Eutrema salsugineum HOM05D005408 ORTHO05D006790 1.2e-104 386.0 651 35.8
Medtr1g041685 Medicago truncatula HOM05D005408 ORTHO05D006790 1.2e-104 386.0 592 38.2
Carub.0007s2798 Capsella rubella HOM05D005408 ORTHO05D006790 1.6e-104 385.6 515 39.4
ECA248G0134 Erigeron canadensis HOM05D005408 ORTHO05D006790 1.6e-104 385.6 548 37.4
Oeu005084.1 Olea europaea HOM05D005408 ORTHO05D006790 2.1e-104 385.2 560 38.4
GSVIVG01027854001 Vitis vinifera HOM05D005408 ORTHO05D006790 2.8e-104 384.8 530 38.5
MD13G1216600 Malus domestica HOM05D005408 ORTHO05D006790 6.1e-104 383.6 612 36.4
Manes.15G043300 Manihot esculenta HOM05D005408 ORTHO05D006790 1.0e-103 382.9 496 39.9
BcaC01g00205 Brassica carinata HOM05D005408 ORTHO05D006790 1.4e-103 382.5 549 38.6
C03p76860 Brassica napus HOM05D005408 ORTHO05D006790 1.4e-103 382.5 549 38.8
Manes.15G043200 Manihot esculenta HOM05D005408 ORTHO05D006790 1.8e-103 382.1 543 38.5
Psat6g104520 Pisum sativum HOM05D005408 ORTHO05D006790 1.8e-103 382.1 669 35.6
QL06p019224 Quercus lobata HOM05D005408 ORTHO05D006790 1.8e-103 382.1 660 35.3
A08p24350 Brassica napus HOM05D005408 ORTHO05D006790 2.3e-103 381.7 524 39.3
CiPaw.02G109300 Carya illinoinensis HOM05D005408 ORTHO05D006790 2.3e-103 381.7 519 38.7
Sp7g12340 Schrenkiella parvula HOM05D005408 ORTHO05D006790 2.3e-103 381.7 554 38.4
CANSAT54G2691 Cannabis sativa HOM05D005408 ORTHO05D006790 5.2e-103 380.6 545 38.3
ClCG05G004200 Citrullus lanatus HOM05D005408 ORTHO05D006790 5.2e-103 380.6 601 36.3
Glyma.10G004700 Glycine max HOM05D005408 ORTHO05D006790 5.2e-103 380.6 522 39.3
Thecc.04G259100 Theobroma cacao HOM05D005408 ORTHO05D006790 5.2e-103 380.6 702 34.8
Cfa014743 Carpinus fangiana HOM05D005408 ORTHO05D006790 6.8e-103 380.2 522 38.9
CSS0016984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 1.2e-102 379.4 555 37.3
CSS0047984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 1.2e-102 379.4 555 37.3
DCAR_024278 Daucus carota HOM05D005408 ORTHO05D006790 1.2e-102 379.4 559 37.9
Duzib151G0888 Durio zibethinus HOM05D005408 ORTHO05D006790 1.2e-102 379.4 698 33.4
Gohir.D02G046500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 1.5e-102 379.0 676 34.9
SalBow3G0714 Salvia bowleyana HOM05D005408 ORTHO05D006790 2.0e-102 378.6 606 35.5
THA.LOC104804761 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 2.0e-102 378.6 532 37.8
Cc03_g05790 Coffea canephora HOM05D005408 ORTHO05D006790 3.4e-102 377.9 596 37.9
Dinv29839 Davidia involucrata HOM05D005408 ORTHO05D006790 3.4e-102 377.9 501 39.5
Oeu002940.1 Olea europaea HOM05D005408 ORTHO05D006790 3.4e-102 377.9 556 39.2
Phvul.007G275400 Phaseolus vulgaris HOM05D005408 ORTHO05D006790 4.4e-102 377.5 502 39.2
arahy.Tifrunner.gnm1.ann1.HQEG75 Arachis hypogaea HOM05D005408 ORTHO05D006790 5.7e-102 377.1 501 39.3
VMungo0720G1073 Vigna mungo HOM05D005408 ORTHO05D006790 7.5e-102 376.7 524 37.8
MELO3C006406.2 Cucumis melo HOM05D005408 ORTHO05D006790 1.3e-101 375.9 603 36.2
Duzib212G0761 Durio zibethinus HOM05D005408 ORTHO05D006790 1.3e-101 375.9 527 39.1
Nitab4.5_0000044g0530 Nicotiana tabacum HOM05D005408 ORTHO05D006790 1.7e-101 375.6 568 37.0
Gohir.A02G040500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 4.9e-101 374.0 701 33.8
Lalb_Chr03g0037341 Lupinus albus HOM05D005408 ORTHO05D006790 4.9e-101 374.0 555 38.2
Lj3A684T25 Lonicera japonica HOM05D005408 ORTHO05D006790 6.3e-101 373.6 525 39.0
Potri.010G069200 Populus trichocarpa HOM05D005408 ORTHO05D006790 8.3e-101 373.2 526 37.6
Zm00001eb258510 Zea mays HOM05D005408 ORTHO05D006790 8.3e-101 373.2 518 38.8
arahy.Tifrunner.gnm1.ann1.NA4LRU Arachis hypogaea HOM05D005408 ORTHO05D006790 1.4e-100 372.5 501 38.9
CARHR220500 Cardamine hirsuta HOM05D005408 ORTHO05D006790 1.4e-100 372.5 573 36.6
Lj3A679T38 Lonicera japonica HOM05D005408 ORTHO05D006790 1.4e-100 372.5 527 39.3
AUR62002164 Chenopodium quinoa HOM05D005408 ORTHO05D006790 3.1e-100 371.3 499 38.1
Potri.008G169200 Populus trichocarpa HOM05D005408 ORTHO05D006790 3.1e-100 371.3 536 37.3
BolC3t19941H Brassica oleracea HOM05D005408 ORTHO05D006790 4.1e-100 370.9 568 37.3
Sabra10G0037900 Salix brachista HOM05D005408 ORTHO05D006790 7.0e-100 370.2 518 37.3
SGA_v2.0_scaffold101G29731 Striga asiatica HOM05D005408 ORTHO05D006790 7.0e-100 370.2 553 38.3
THA.LOC104822240 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 7.0e-100 370.2 494 39.3
CsaV3_3G011930 Cucumis sativus L. HOM05D005408 ORTHO05D006790 1.2e-99 369.4 607 35.6
Sed0026902 Sechium edule HOM05D005408 ORTHO05D006790 1.2e-99 369.4 661 35.4
CiPaw.01G181400 Carya illinoinensis HOM05D005408 ORTHO05D006790 2.0e-99 368.6 493 38.9
vmacro15459 Vaccinium macrocarpon HOM05D005408 ORTHO05D006790 2.7e-99 368.2 567 37.7
Zm00001eb191660 Zea mays HOM05D005408 ORTHO05D006790 2.7e-99 368.2 516 38.0
Migut.G00502 Erythranthe guttata HOM05D005408 ORTHO05D006790 3.5e-99 367.9 549 38.6
BraA08t34390Z Brassica rapa HOM05D005408 ORTHO05D006790 5.9e-99 367.1 584 36.8
MSTRG.21921 Avicennia marina HOM05D005408 ORTHO05D006790 1.0e-98 366.3 530 37.9
HanXRQChr01g0023201 Helianthus annuus HOM05D005408 ORTHO05D006790 1.3e-98 365.9 499 38.5
FAN22G0039 Fragaria x ananassa HOM05D005408 ORTHO05D006790 1.5e-97 362.5 546 37.5
Lsat_1_v5_gn_1_74661 Lactuca sativa HOM05D005408 ORTHO05D006790 5.6e-97 360.5 535 37.6
CDE07G1006 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 2.1e-96 358.6 502 37.8
MSTRG.4147 Avicennia marina HOM05D005408 ORTHO05D006790 4.7e-96 357.5 583 35.7
PGR004G2334 Punica granatum HOM05D005408 ORTHO05D006790 8.0e-96 356.7 506 36.8
Sabra08G0129000 Salix brachista HOM05D005408 ORTHO05D006790 8.0e-96 356.7 541 36.2
CDE04G2551 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 3.1e-95 354.8 511 37.4
SGA_v2.0_scaffold43G16217 Striga asiatica HOM05D005408 ORTHO05D006790 2.0e-94 352.1 656 34.3
Cpa.g.sc44.32 Carica papaya HOM05D005408 ORTHO05D006790 8.3e-93 346.7 553 36.2
Gorai.005G051300 Gossypium raimondii HOM05D005408 ORTHO05D006790 7.3e-89 333.6 622 34.2
unitig_736.g22443 Utricularia gibba HOM05D005408 ORTHO05D006790 1.3e-85 322.8 561 34.8
HPP92_008326 Vanilla planifolia HOM05D005408 ORTHO05D006790 1.1e-81 309.7 629 33.2
TPR.G25191 Trifolium pratense HOM05D005408 ORTHO05D006790 1.8e-79 302.4 491 34.8
Os02g0809900 Oryza sativa ssp. japonica HOM05D005408 ORTHO05D006790 9.2e-68 263.5 321 41.4
Ah.13g072600 Amaranthus hybridus HOM05D005408 ORTHO05D006790 4.8e-40 171.4 347 31.7
CBR_g30942 Chara braunii HOM05D005408 ORTHO05D006790 2.5e-20 105.9 505 23.0
SalBow8G3468 Salvia bowleyana HOM05D005408 ORTHO05D006790 1.0e-10 73.9 140 32.9
Hund11908 Selenicereus undatus HOM05D005408 ORTHO05D006790 5.2e-10 71.6 144 29.9
SalBow7G4774 Salvia bowleyana HOM05D005408 ORTHO05D006790 2.0e-09 69.7 140 32.9
C04p41440 Brassica napus HOM05D005408 ORTHO05D006790 2.4e-07 62.8 81 43.2
BolC4t25725H Brassica oleracea HOM05D005408 ORTHO05D006790 4.1e-07 62.0 81 42.0


User provided reference genes

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