Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 3.7e-168 594.7 290 100.0
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 5.2e-69 265.4 207 64.7
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 8.5e-64 248.1 228 59.6
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 8.3e-59 231.5 197 58.9
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 1.4e-58 230.7 232 53.9
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 1.8e-58 230.3 195 59.5
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 1.8e-58 230.3 207 56.0
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 3.1e-58 229.6 204 58.3
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 3.1e-58 229.6 204 58.3
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 3.1e-58 229.6 204 58.3
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 4.1e-58 229.2 245 50.2
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 4.1e-58 229.2 185 61.6
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 7.0e-58 228.4 206 55.8
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 9.2e-58 228.0 246 50.4
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 9.2e-58 228.0 180 62.2
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 1.6e-57 227.3 211 55.9
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 1.6e-57 227.3 211 55.9
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 2.0e-57 226.9 180 60.0
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 5.9e-57 225.3 195 57.9
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 7.8e-57 224.9 200 57.5
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 1.0e-56 224.6 182 63.2
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.0e-56 224.6 182 63.2
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.0e-56 224.6 182 63.2
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.0e-56 224.6 182 63.2
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 1.3e-56 224.2 227 53.7
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 1.7e-56 223.8 256 51.2
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 1.7e-56 223.8 256 51.2
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 1.7e-56 223.8 183 60.7
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 1.7e-56 223.8 205 55.6
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 1.7e-56 223.8 229 51.1
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 2.9e-56 223.0 186 60.2
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 3.8e-56 222.6 182 62.6
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 3.8e-56 222.6 230 50.0
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 5.0e-56 222.2 182 62.6
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 5.0e-56 222.2 182 59.9
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 6.6e-56 221.9 227 51.5
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 6.6e-56 221.9 217 52.1
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 8.6e-56 221.5 209 55.0
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 8.6e-56 221.5 180 61.1
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 1.1e-55 221.1 195 60.0
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 1.1e-55 221.1 179 60.9
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 1.5e-55 220.7 187 56.7
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 1.9e-55 220.3 205 54.1
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 1.9e-55 220.3 178 59.0
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 2.5e-55 219.9 182 62.1
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 2.5e-55 219.9 233 50.6
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 3.3e-55 219.5 187 56.1
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 4.3e-55 219.2 187 56.7
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 4.3e-55 219.2 187 56.7
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 7.3e-55 218.4 261 47.1
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 7.3e-55 218.4 200 56.5
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 1.2e-54 217.6 181 60.2
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 1.2e-54 217.6 189 55.0
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 1.2e-54 217.6 231 49.8
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 1.2e-54 217.6 184 60.3
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 1.2e-54 217.6 169 62.1
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 1.6e-54 217.2 164 60.4
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 2.1e-54 216.9 189 55.0
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 2.8e-54 216.5 187 58.3
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 2.8e-54 216.5 183 59.6
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 2.8e-54 216.5 218 52.8
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 2.8e-54 216.5 190 58.4
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 3.6e-54 216.1 181 59.7
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 3.6e-54 216.1 181 59.7
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 3.6e-54 216.1 189 57.1
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 4.7e-54 215.7 192 55.7
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 4.7e-54 215.7 185 57.8
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 4.7e-54 215.7 214 52.8
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 6.1e-54 215.3 177 59.9
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 6.1e-54 215.3 187 57.2
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 6.1e-54 215.3 179 59.2
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 6.1e-54 215.3 209 54.1
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 8.0e-54 214.9 205 54.1
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 1.0e-53 214.5 206 54.9
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 1.4e-53 214.2 160 62.5
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 1.8e-53 213.8 206 52.4
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 1.8e-53 213.8 190 54.2
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 1.8e-53 213.8 211 51.7
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 2.3e-53 213.4 228 49.6
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 2.3e-53 213.4 189 54.5
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 2.3e-53 213.4 188 55.9
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 3.0e-53 213.0 165 59.4
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 3.0e-53 213.0 189 56.1
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 3.0e-53 213.0 189 56.1
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 4.0e-53 212.6 179 55.9
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 4.0e-53 212.6 179 55.9
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 4.0e-53 212.6 219 52.5
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 6.8e-53 211.8 179 56.4
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 6.8e-53 211.8 179 56.4
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 6.8e-53 211.8 200 54.5
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 6.8e-53 211.8 189 56.1
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 6.8e-53 211.8 189 56.1
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 8.9e-53 211.5 222 48.6
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 1.2e-52 211.1 231 49.8
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 1.3e-51 207.6 182 56.0
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 1.3e-51 207.6 170 60.0
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 1.1e-50 204.5 239 47.7
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 2.4e-50 203.4 313 39.9
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 2.4e-50 203.4 160 58.8
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 5.9e-49 198.7 216 47.2
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 9.5e-47 191.4 125 70.4
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 5.8e-44 182.2 132 65.2
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 1.4e-42 177.6 110 74.5
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 3.2e-42 176.4 131 64.9
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 7.0e-42 175.3 126 63.5
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 2.1e-38 163.7 132 63.6
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 1.7e-35 154.1 210 41.4
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 1.4e-34 151.0 126 61.1
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 1.7e-32 144.1 124 59.7
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 5.1e-32 142.5 131 52.7
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 2.5e-31 140.2 120 57.5
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 3.3e-31 139.8 89 69.7
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 2.8e-30 136.7 89 73.0
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 5.2e-29 132.5 150 47.3
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 6.9e-21 105.5 54 90.7
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 8.4e-19 98.6 96 55.2
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 2.3e-16 90.5 131 42.7
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 1.1e-13 81.6 64 56.2
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 1.1e-10 71.6 48 62.5
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 1.5e-07 61.2 38 60.5
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 7.4e-07 58.9 99 34.3
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 1.3e-06 58.2 31 80.6


User provided reference genes

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