Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 3.7e-159 565.1 336 100.0
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 5.9e-101 371.7 328 63.4
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 5.0e-100 368.6 328 55.8
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 1.5e-99 367.1 328 69.2
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 1.6e-98 363.6 328 71.0
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 1.6e-98 363.6 321 71.0
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 1.6e-98 363.6 323 55.4
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 4.7e-98 362.1 327 69.7
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 6.1e-98 361.7 328 68.0
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 1.4e-97 360.5 326 56.4
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 2.3e-97 359.8 328 65.5
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 3.1e-97 359.4 320 60.3
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 8.9e-97 357.8 320 53.1
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 1.2e-96 357.5 323 53.3
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 1.5e-96 357.1 323 69.7
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 3.4e-96 355.9 320 70.3
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 4.4e-96 355.5 320 68.4
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 9.8e-96 354.4 325 66.2
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 9.8e-96 354.4 320 68.1
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 9.8e-96 354.4 320 66.6
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.7e-95 353.6 323 69.3
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 1.7e-95 353.6 329 51.4
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 2.2e-95 353.2 326 52.8
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 2.2e-95 353.2 320 53.1
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 2.9e-95 352.8 324 67.6
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 2.9e-95 352.8 323 69.7
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 2.9e-95 352.8 325 67.4
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 3.7e-95 352.4 320 52.8
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 4.9e-95 352.1 327 52.0
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 6.4e-95 351.7 234 67.5
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 8.3e-95 351.3 320 52.2
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 8.3e-95 351.3 320 68.4
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 8.3e-95 351.3 320 68.4
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 8.3e-95 351.3 321 52.3
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 1.1e-94 350.9 323 68.1
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 1.1e-94 350.9 320 52.5
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 1.1e-94 350.9 321 67.9
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 1.1e-94 350.9 323 67.2
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 1.9e-94 350.1 320 68.1
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 1.9e-94 350.1 320 67.8
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 1.9e-94 350.1 321 52.6
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 1.9e-94 350.1 323 67.5
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 1.9e-94 350.1 320 52.8
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 1.9e-94 350.1 320 69.1
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 1.9e-94 350.1 320 67.8
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 2.4e-94 349.7 324 67.6
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 3.2e-94 349.4 235 67.7
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 3.2e-94 349.4 323 58.2
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 3.2e-94 349.4 323 56.7
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 5.4e-94 348.6 321 53.9
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 5.4e-94 348.6 323 51.7
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 5.4e-94 348.6 323 51.7
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 7.0e-94 348.2 320 68.8
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 7.0e-94 348.2 235 66.8
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 9.2e-94 347.8 320 67.5
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 9.2e-94 347.8 321 68.2
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 1.2e-93 347.4 327 67.0
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 1.2e-93 347.4 324 67.6
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 1.6e-93 347.1 320 68.4
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 1.6e-93 347.1 328 65.5
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 2.0e-93 346.7 323 63.5
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 2.7e-93 346.3 321 66.7
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 2.7e-93 346.3 323 66.3
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 3.5e-93 345.9 316 66.1
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 3.5e-93 345.9 328 52.1
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 6.0e-93 345.1 320 67.5
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.0e-92 344.4 323 66.9
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 1.0e-92 344.4 320 67.2
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 1.0e-92 344.4 320 66.9
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 3.0e-92 342.8 321 53.3
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 3.0e-92 342.8 321 67.6
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 3.9e-92 342.4 326 52.5
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 5.0e-92 342.0 323 52.3
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 5.0e-92 342.0 235 66.0
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 6.6e-92 341.7 323 52.3
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 8.6e-92 341.3 331 52.0
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 1.5e-91 340.5 238 64.3
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 1.9e-91 340.1 321 59.8
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 2.5e-91 339.7 321 52.3
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 2.5e-91 339.7 320 65.9
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 7.3e-91 338.2 321 52.3
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 7.3e-91 338.2 235 66.4
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 7.3e-91 338.2 321 57.0
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 9.5e-91 337.8 326 51.8
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 1.2e-90 337.4 320 67.2
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 2.8e-90 336.3 320 52.2
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 3.6e-90 335.9 236 65.3
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 3.1e-89 332.8 237 65.0
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 4.0e-89 332.4 327 63.6
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 5.2e-89 332.0 329 50.5
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.2e-88 330.9 320 58.4
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 2.0e-88 330.1 320 65.0
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 2.6e-88 329.7 320 65.3
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 3.4e-88 329.3 320 65.0
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 4.4e-88 328.9 225 66.2
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.7e-87 327.0 321 65.4
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.3e-79 300.8 306 63.7
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 5.4e-78 295.4 262 55.3
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 2.7e-77 293.1 320 63.4
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 3.9e-68 262.7 256 52.0
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 6.6e-68 261.9 256 67.6
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 4.3e-67 259.2 256 69.5
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 7.3e-67 258.5 271 67.2
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 1.6e-66 257.3 253 71.9
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 1.4e-65 254.2 396 37.4
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 3.1e-65 253.1 255 69.8
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 5.3e-65 252.3 246 52.8
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 4.3e-59 232.6 329 45.9
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 2.2e-55 220.3 246 65.0
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 3.5e-53 213.0 190 52.6
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 2.1e-45 187.2 223 45.3
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 2.7e-45 186.8 191 49.7
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 2.5e-43 180.3 137 59.1
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 9.0e-41 171.8 122 62.3
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 9.3e-38 161.8 120 59.2
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 6.9e-33 145.6 94 67.0
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 7.4e-11 72.4 87 48.3
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 3.1e-09 67.0 57 52.6
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 3.5e-08 63.5 64 51.6


User provided reference genes

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