Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0063s0038 Marchantia polymorpha HOM05D006144 ORTHO05D006357 0.0e+00 3643.6 1888 100.0
Mapoly0063s0034 Marchantia polymorpha HOM05D006144 ORTHO05D006357 0.0e+00 2580.8 1896 73.6
SMO301G0037 Selaginella moellendorffii HOM05D006144 ORTHO05D006357 1.8e-106 392.5 1008 31.2
COL.COLO4_22183 Corchorus olitorius HOM05D006144 ORTHO05D006357 2.5e-103 382.1 822 32.7
Nn5g30196 Nelumbo nucifera HOM05D006144 ORTHO05D006357 2.1e-102 379.0 774 33.1
Atru.chr3.396 Acer truncatum HOM05D006144 ORTHO05D006357 4.4e-100 371.3 820 32.0
Nn1g05861 Nelumbo nucifera HOM05D006144 ORTHO05D006357 2.8e-99 368.6 812 30.9
Thecc.01G052700 Theobroma cacao HOM05D006144 ORTHO05D006357 7.0e-98 364.0 815 31.3
Gohir.D11G049700 Gossypium hirsutum HOM05D006144 ORTHO05D006357 3.5e-97 361.7 837 31.4
Gorai.007G053500 Gossypium raimondii HOM05D006144 ORTHO05D006357 5.9e-97 360.9 837 31.4
Potri.007G041300 Populus trichocarpa HOM05D006144 ORTHO05D006357 7.7e-97 360.5 844 32.2
Actinidia12060 Actinidia chinensis HOM05D006144 ORTHO05D006357 1.0e-96 360.1 831 31.8
QL06p042250 Quercus lobata HOM05D006144 ORTHO05D006357 1.0e-96 360.1 808 32.1
Rhsim10G0119800 Rhododendron simsii HOM05D006144 ORTHO05D006357 2.2e-96 359.0 831 31.8
CSS0044544 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 3.8e-96 358.2 849 31.6
Cfa003998 Carpinus fangiana HOM05D006144 ORTHO05D006357 8.5e-96 357.1 809 32.1
FAN26G0177 Fragaria x ananassa HOM05D006144 ORTHO05D006357 5.5e-95 354.4 786 33.7
FAN28G0789 Fragaria x ananassa HOM05D006144 ORTHO05D006357 7.2e-95 354.0 793 33.3
MD02G1169100 Malus domestica HOM05D006144 ORTHO05D006357 1.2e-94 353.2 797 32.5
CSS0009151 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 1.6e-94 352.8 818 30.7
Prupe.7G136200 Prunus persica HOM05D006144 ORTHO05D006357 1.6e-94 352.8 863 31.1
Sabra07G0036900 Salix brachista HOM05D006144 ORTHO05D006357 1.6e-94 352.8 828 32.2
Duzib147G1467 Durio zibethinus HOM05D006144 ORTHO05D006357 4.7e-94 351.3 843 31.1
CSS0011451 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 1.0e-93 350.1 818 30.7
FAN23G0857 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.0e-93 350.1 786 33.6
Peaxi162Scf00183g00711 Petunia axillaris HOM05D006144 ORTHO05D006357 1.8e-93 349.4 841 30.8
Gohir.A11G046100 Gossypium hirsutum HOM05D006144 ORTHO05D006357 2.3e-93 349.0 1074 28.9
RcHm_v2.0_Chr2g0105021 Rosa chinensis HOM05D006144 ORTHO05D006357 3.0e-93 348.6 785 33.0
Actinidia36503 Actinidia chinensis HOM05D006144 ORTHO05D006357 5.2e-93 347.8 825 31.3
CANSAT01G0270 Cannabis sativa HOM05D006144 ORTHO05D006357 8.8e-93 347.1 822 31.0
Haze_15426 Corylus avellana HOM05D006144 ORTHO05D006357 8.8e-93 347.1 835 31.4
FAN19G3143 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.5e-92 346.3 788 33.4
Potri.005G136600 Populus trichocarpa HOM05D006144 ORTHO05D006357 2.6e-92 345.5 922 31.2
FvH4_1g15710 Fragaria vesca HOM05D006144 ORTHO05D006357 4.4e-92 344.7 793 33.2
Hma1.2p1_0200F.1_g086100 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 7.5e-92 344.0 834 31.2
Sopen03g008900 Solanum pennellii HOM05D006144 ORTHO05D006357 7.5e-92 344.0 804 29.6
Solyc03g044620.4 Solanum lycopersicum HOM05D006144 ORTHO05D006357 4.8e-91 341.3 815 30.1
Nitab4.5_0000382g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 1.4e-90 339.7 813 30.4
PGSC0003DMG400019754 Solanum tuberosum HOM05D006144 ORTHO05D006357 1.4e-90 339.7 809 29.7
CAN.G11.1 Capsicum annuum HOM05D006144 ORTHO05D006357 2.4e-90 339.0 808 29.8
TWI09G0039 Tripterygium wilfordii HOM05D006144 ORTHO05D006357 3.1e-90 338.6 838 31.0
Ciclev10024721m.g Citrus clementina HOM05D006144 ORTHO05D006357 4.1e-90 338.2 846 31.0
Cc07_g05860 Coffea canephora HOM05D006144 ORTHO05D006357 4.1e-90 338.2 845 29.8
Lalb_Chr09g0333701 Lupinus albus HOM05D006144 ORTHO05D006357 4.1e-90 338.2 814 30.8
CiPaw.01G021400 Carya illinoinensis HOM05D006144 ORTHO05D006357 5.3e-90 337.8 808 31.6
ATR0104G015 Amborella trichopoda HOM05D006144 ORTHO05D006357 9.1e-90 337.0 838 30.0
Nitab4.5_0001684g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 1.2e-89 336.7 807 29.7
Aqoxy6G01406 Aquilegia oxysepala HOM05D006144 ORTHO05D006357 5.9e-89 334.3 1022 28.9
Manes.12G100500 Manihot esculenta HOM05D006144 ORTHO05D006357 2.9e-88 332.0 802 30.9
MD15G1281500 Malus domestica HOM05D006144 ORTHO05D006357 4.2e-87 328.2 1124 29.4
AUR62003855 Chenopodium quinoa HOM05D006144 ORTHO05D006357 5.5e-87 327.8 823 30.4
MSTRG.2895 Avicennia marina HOM05D006144 ORTHO05D006357 7.2e-87 327.4 826 30.4
HPP92_004081 Vanilla planifolia HOM05D006144 ORTHO05D006357 7.2e-87 327.4 823 29.5
DCAR_025720 Daucus carota HOM05D006144 ORTHO05D006357 9.4e-87 327.0 1124 29.0
PGR102G0121 Punica granatum HOM05D006144 ORTHO05D006357 9.4e-87 327.0 801 31.5
VMungo1215G0092 Vigna mungo HOM05D006144 ORTHO05D006357 2.1e-86 325.9 809 28.8
Glyma.11G057500 Glycine max HOM05D006144 ORTHO05D006357 2.7e-86 325.5 804 29.2
Oeu049306.1 Olea europaea HOM05D006144 ORTHO05D006357 8.0e-86 323.9 804 29.5
vmacro05326 Vaccinium macrocarpon HOM05D006144 ORTHO05D006357 6.8e-85 320.9 935 28.0
Oeu003786.1 Olea europaea HOM05D006144 ORTHO05D006357 1.5e-84 319.7 804 29.5
Migut.H00451 Erythranthe guttata HOM05D006144 ORTHO05D006357 3.4e-84 318.5 807 29.6
arahy.Tifrunner.gnm1.ann1.AH11HU Arachis hypogaea HOM05D006144 ORTHO05D006357 7.5e-84 317.4 1102 27.7
Phvul.002G020300 Phaseolus vulgaris HOM05D006144 ORTHO05D006357 7.5e-84 317.4 814 27.8
Hund13563 Selenicereus undatus HOM05D006144 ORTHO05D006357 1.7e-83 316.2 809 31.1
Eucgr.H01999 Eucalyptus grandis HOM05D006144 ORTHO05D006357 4.8e-83 314.7 823 29.4
MBI06_g08189_MAGBIO Magnolia biondii HOM05D006144 ORTHO05D006357 4.8e-83 314.7 706 31.3
Lalb_Chr16g0388301 Lupinus albus HOM05D006144 ORTHO05D006357 8.3e-83 313.9 803 29.4
ClCG01G016710 Citrullus lanatus HOM05D006144 ORTHO05D006357 1.1e-82 313.5 811 30.2
arahy.Tifrunner.gnm1.ann1.IY5EPV Arachis hypogaea HOM05D006144 ORTHO05D006357 1.4e-82 313.2 1101 27.6
Psat0s3889g0080 Pisum sativum HOM05D006144 ORTHO05D006357 1.4e-82 313.2 815 28.5
Lj2g0024358 Lotus japonicus HOM05D006144 ORTHO05D006357 4.1e-82 311.6 813 29.9
Os03g0186500 Oryza sativa ssp. japonica HOM05D006144 ORTHO05D006357 4.1e-82 311.6 919 27.3
Sed0018548 Sechium edule HOM05D006144 ORTHO05D006357 5.4e-82 311.2 852 29.7
CDE03G0440 Ceratophyllum demersum HOM05D006144 ORTHO05D006357 1.2e-81 310.1 807 29.2
EL10Ac6g15152 Beta vulgaris HOM05D006144 ORTHO05D006357 2.0e-81 309.3 866 29.8
Glyma.01G184700 Glycine max HOM05D006144 ORTHO05D006357 2.7e-81 308.9 804 28.5
Ca_24781_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 3.5e-81 308.5 1133 26.8
Sc03g0001430 Simmondsia chinensis HOM05D006144 ORTHO05D006357 7.7e-81 307.4 925 27.7
AUR62001952 Chenopodium quinoa HOM05D006144 ORTHO05D006357 1.0e-80 307.0 827 29.6
CsaV3_6G043130 Cucumis sativus L. HOM05D006144 ORTHO05D006357 3.8e-80 305.1 1068 27.6
TPR.G31101 Trifolium pratense HOM05D006144 ORTHO05D006357 5.0e-80 304.7 1012 27.2
MELO3C007550.2 Cucumis melo HOM05D006144 ORTHO05D006357 2.5e-79 302.4 1061 27.7
Ah.03g144510 Amaranthus hybridus HOM05D006144 ORTHO05D006357 2.7e-78 298.9 827 28.9
THA.LOC104826201 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 6.8e-77 294.3 805 28.0
Zm00001eb006470 Zea mays HOM05D006144 ORTHO05D006357 8.8e-77 293.9 865 27.3
Dinv29969 Davidia involucrata HOM05D006144 ORTHO05D006357 1.7e-72 279.6 832 29.4
SGA_v2.0_scaffold204G41590 Striga asiatica HOM05D006144 ORTHO05D006357 8.6e-72 277.3 1040 26.3
THA.LOC104804508 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 1.2e-68 266.9 781 27.0
ECA232G0891 Erigeron canadensis HOM05D006144 ORTHO05D006357 2.6e-68 265.8 850 28.8
Dinv39873 Davidia involucrata HOM05D006144 ORTHO05D006357 4.9e-67 261.5 757 28.9
SEGI_14166 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 8.3e-67 260.8 607 31.1
HanXRQChr14g0430551 Helianthus annuus HOM05D006144 ORTHO05D006357 2.4e-66 259.2 969 26.8
HPP92_004109 Vanilla planifolia HOM05D006144 ORTHO05D006357 2.1e-54 219.5 605 28.1
Lsat_1_v5_gn_4_167780 Lactuca sativa HOM05D006144 ORTHO05D006357 9.8e-52 210.7 1008 25.5
Oeu004869.1 Olea europaea HOM05D006144 ORTHO05D006357 2.9e-51 209.1 1014 23.7
Lj4A140T30 Lonicera japonica HOM05D006144 ORTHO05D006357 1.6e-49 203.4 389 34.2
Pp3c4_25960 Physcomitrium patens HOM05D006144 ORTHO05D006357 1.7e-48 199.9 677 30.1
TAR381G0606 Trochodendron aralioides HOM05D006144 ORTHO05D006357 2.3e-48 199.5 342 37.1
Pp3c26_5160 Physcomitrium patens HOM05D006144 ORTHO05D006357 3.0e-48 199.1 608 29.8
SEGI_17223 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 1.6e-46 193.4 361 35.7
TAR381G1042 Trochodendron aralioides HOM05D006144 ORTHO05D006357 6.2e-46 191.4 360 34.2
Cpa.g.sc55.182 Carica papaya HOM05D006144 ORTHO05D006357 1.2e-44 187.2 332 33.7
GSVIVG01002633001 Vitis vinifera HOM05D006144 ORTHO05D006357 3.4e-44 185.7 363 32.5
PSO675G0817 Papaver somniferum HOM05D006144 ORTHO05D006357 2.9e-43 182.6 370 31.6
Lj4C140T7 Lonicera japonica HOM05D006144 ORTHO05D006357 6.4e-43 181.4 333 32.4
unitig_736.g22372 Utricularia gibba HOM05D006144 ORTHO05D006357 6.6e-40 171.4 306 34.0
Cpa.g.sc55.178 Carica papaya HOM05D006144 ORTHO05D006357 2.5e-39 169.5 384 33.3
Psat4g089200 Pisum sativum HOM05D006144 ORTHO05D006357 2.1e-38 166.4 472 28.2
Ca_22186_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 8.4e-35 154.5 319 29.8
TPR.G640 Trifolium pratense HOM05D006144 ORTHO05D006357 1.4e-34 153.7 355 30.1
PSO541G4136 Papaver somniferum HOM05D006144 ORTHO05D006357 1.1e-29 137.5 370 27.0
MCO09G582 Micromonas commoda HOM05D006144 ORTHO05D006357 3.4e-28 132.5 411 27.7
CBR_g31222 Chara braunii HOM05D006144 ORTHO05D006357 7.6e-28 131.3 482 28.6
Hma1.2p1_1415F.1_g282000 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 1.4e-21 110.5 300 27.0
AagrBONN_evm.TU.Sc2ySwM_228.442 Anthoceros agrestis HOM05D006144 ORTHO05D006357 1.8e-21 110.2 1103 25.5
MSTRG.23764 Avicennia marina HOM05D006144 ORTHO05D006357 1.4e-18 100.5 294 26.9
AUR62013383 Chenopodium quinoa HOM05D006144 ORTHO05D006017 5.6e-15 88.6 177 33.9
AUR62039591 Chenopodium quinoa HOM05D006144 ORTHO05D006357 2.1e-14 86.7 177 31.6


User provided reference genes

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