Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0063s0034 Marchantia polymorpha HOM05D006144 ORTHO05D006357 0.0e+00 3611.6 1883 100.0
Mapoly0063s0038 Marchantia polymorpha HOM05D006144 ORTHO05D006357 0.0e+00 2582.4 1896 73.6
SMO301G0037 Selaginella moellendorffii HOM05D006144 ORTHO05D006357 1.2e-102 379.8 841 32.3
Gohir.A11G046100 Gossypium hirsutum HOM05D006144 ORTHO05D006357 1.0e-96 360.1 810 32.5
COL.COLO4_22183 Corchorus olitorius HOM05D006144 ORTHO05D006357 3.8e-96 358.2 899 30.8
Gohir.D11G049700 Gossypium hirsutum HOM05D006144 ORTHO05D006357 8.5e-96 357.1 810 31.7
Gorai.007G053500 Gossypium raimondii HOM05D006144 ORTHO05D006357 1.4e-95 356.3 810 31.9
Rhsim10G0119800 Rhododendron simsii HOM05D006144 ORTHO05D006357 1.5e-92 346.3 822 30.5
Nn5g30196 Nelumbo nucifera HOM05D006144 ORTHO05D006357 2.0e-92 345.9 810 30.1
Thecc.01G052700 Theobroma cacao HOM05D006144 ORTHO05D006357 2.0e-92 345.9 894 29.1
Actinidia12060 Actinidia chinensis HOM05D006144 ORTHO05D006357 4.4e-92 344.7 810 31.4
Nn1g05861 Nelumbo nucifera HOM05D006144 ORTHO05D006357 4.4e-92 344.7 810 30.4
CSS0044544 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 2.8e-91 342.0 811 31.7
Actinidia36503 Actinidia chinensis HOM05D006144 ORTHO05D006357 3.1e-90 338.6 1003 28.2
Duzib147G1467 Durio zibethinus HOM05D006144 ORTHO05D006357 3.1e-90 338.6 882 29.9
Atru.chr3.396 Acer truncatum HOM05D006144 ORTHO05D006357 9.1e-90 337.0 834 29.5
CSS0009151 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 1.5e-89 336.3 797 31.4
Cfa003998 Carpinus fangiana HOM05D006144 ORTHO05D006357 4.5e-89 334.7 833 30.0
CSS0011451 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 1.7e-88 332.8 797 31.2
MD02G1169100 Malus domestica HOM05D006144 ORTHO05D006357 2.2e-88 332.4 796 31.4
FAN28G0789 Fragaria x ananassa HOM05D006144 ORTHO05D006357 2.9e-88 332.0 901 30.6
Haze_15426 Corylus avellana HOM05D006144 ORTHO05D006357 6.5e-88 330.9 832 30.4
Potri.005G136600 Populus trichocarpa HOM05D006144 ORTHO05D006357 1.1e-87 330.1 914 30.6
QL06p042250 Quercus lobata HOM05D006144 ORTHO05D006357 1.1e-87 330.1 856 30.4
FAN26G0177 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.5e-87 329.7 917 30.5
Prupe.7G136200 Prunus persica HOM05D006144 ORTHO05D006357 5.5e-87 327.8 807 30.6
Sopen03g008900 Solanum pennellii HOM05D006144 ORTHO05D006357 5.5e-87 327.8 802 29.1
FAN19G3143 Fragaria x ananassa HOM05D006144 ORTHO05D006357 9.4e-87 327.0 916 30.5
Peaxi162Scf00183g00711 Petunia axillaris HOM05D006144 ORTHO05D006357 9.4e-87 327.0 779 30.0
MD15G1281500 Malus domestica HOM05D006144 ORTHO05D006357 1.2e-86 326.6 795 30.3
Lalb_Chr09g0333701 Lupinus albus HOM05D006144 ORTHO05D006357 2.1e-86 325.9 842 29.7
FAN23G0857 Fragaria x ananassa HOM05D006144 ORTHO05D006357 2.7e-86 325.5 915 30.4
FvH4_1g15710 Fragaria vesca HOM05D006144 ORTHO05D006357 6.1e-86 324.3 919 30.6
PGSC0003DMG400019754 Solanum tuberosum HOM05D006144 ORTHO05D006357 1.4e-85 323.2 814 29.5
Potri.007G041300 Populus trichocarpa HOM05D006144 ORTHO05D006357 3.0e-85 322.0 856 30.6
Solyc03g044620.4 Solanum lycopersicum HOM05D006144 ORTHO05D006357 4.0e-85 321.6 813 28.8
Nitab4.5_0000382g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 8.8e-85 320.5 809 30.2
TWI09G0039 Tripterygium wilfordii HOM05D006144 ORTHO05D006357 1.5e-84 319.7 835 30.7
Sabra07G0036900 Salix brachista HOM05D006144 ORTHO05D006357 1.3e-83 316.6 909 29.9
CiPaw.01G021400 Carya illinoinensis HOM05D006144 ORTHO05D006357 1.7e-83 316.2 806 30.1
Nitab4.5_0001684g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 1.7e-83 316.2 810 29.4
RcHm_v2.0_Chr2g0105021 Rosa chinensis HOM05D006144 ORTHO05D006357 1.7e-83 316.2 893 30.2
Oeu049306.1 Olea europaea HOM05D006144 ORTHO05D006357 3.7e-83 315.1 922 28.6
PGR102G0121 Punica granatum HOM05D006144 ORTHO05D006357 3.7e-83 315.1 810 30.7
HPP92_004081 Vanilla planifolia HOM05D006144 ORTHO05D006357 4.8e-83 314.7 837 28.3
arahy.Tifrunner.gnm1.ann1.AH11HU Arachis hypogaea HOM05D006144 ORTHO05D006357 1.1e-82 313.5 829 29.3
ATR0104G015 Amborella trichopoda HOM05D006144 ORTHO05D006357 2.4e-82 312.4 921 27.3
Aqoxy6G01406 Aquilegia oxysepala HOM05D006144 ORTHO05D006357 2.4e-82 312.4 923 28.3
arahy.Tifrunner.gnm1.ann1.IY5EPV Arachis hypogaea HOM05D006144 ORTHO05D006357 2.4e-82 312.4 827 29.5
CANSAT01G0270 Cannabis sativa HOM05D006144 ORTHO05D006357 3.1e-82 312.0 808 30.3
Oeu003786.1 Olea europaea HOM05D006144 ORTHO05D006357 3.1e-82 312.0 803 29.8
Hma1.2p1_0200F.1_g086100 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 5.3e-82 311.2 879 29.0
MSTRG.2895 Avicennia marina HOM05D006144 ORTHO05D006357 7.0e-82 310.8 805 28.9
Cc07_g05860 Coffea canephora HOM05D006144 ORTHO05D006357 9.1e-82 310.5 855 29.5
Manes.12G100500 Manihot esculenta HOM05D006144 ORTHO05D006357 2.0e-81 309.3 896 30.0
vmacro05326 Vaccinium macrocarpon HOM05D006144 ORTHO05D006357 1.0e-80 307.0 912 28.2
CAN.G11.1 Capsicum annuum HOM05D006144 ORTHO05D006357 1.7e-80 306.2 907 28.1
Ciclev10024721m.g Citrus clementina HOM05D006144 ORTHO05D006357 1.9e-79 302.8 1015 28.4
Lalb_Chr16g0388301 Lupinus albus HOM05D006144 ORTHO05D006357 2.5e-79 302.4 808 28.2
Glyma.11G057500 Glycine max HOM05D006144 ORTHO05D006357 4.2e-79 301.6 843 28.0
Phvul.002G020300 Phaseolus vulgaris HOM05D006144 ORTHO05D006357 7.2e-79 300.8 856 27.5
TPR.G31101 Trifolium pratense HOM05D006144 ORTHO05D006357 1.6e-78 299.7 871 29.3
Ca_24781_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 2.1e-78 299.3 799 29.0
MBI06_g08189_MAGBIO Magnolia biondii HOM05D006144 ORTHO05D006357 4.0e-77 295.0 696 30.5
VMungo1215G0092 Vigna mungo HOM05D006144 ORTHO05D006357 6.8e-77 294.3 852 27.2
Eucgr.H01999 Eucalyptus grandis HOM05D006144 ORTHO05D006357 8.8e-77 293.9 856 28.7
DCAR_025720 Daucus carota HOM05D006144 ORTHO05D006357 1.2e-76 293.5 826 29.3
Psat0s3889g0080 Pisum sativum HOM05D006144 ORTHO05D006357 1.2e-76 293.5 845 27.5
AUR62003855 Chenopodium quinoa HOM05D006144 ORTHO05D006357 3.4e-76 292.0 873 27.3
Os03g0186500 Oryza sativa ssp. japonica HOM05D006144 ORTHO05D006357 5.7e-76 291.2 815 27.0
Lj2g0024358 Lotus japonicus HOM05D006144 ORTHO05D006357 7.5e-76 290.8 833 28.6
Glyma.01G184700 Glycine max HOM05D006144 ORTHO05D006357 2.8e-75 288.9 816 27.9
Zm00001eb006470 Zea mays HOM05D006144 ORTHO05D006357 6.3e-75 287.7 866 27.1
Migut.H00451 Erythranthe guttata HOM05D006144 ORTHO05D006357 1.4e-74 286.6 812 28.0
MELO3C007550.2 Cucumis melo HOM05D006144 ORTHO05D006357 1.8e-74 286.2 794 28.3
SGA_v2.0_scaffold204G41590 Striga asiatica HOM05D006144 ORTHO05D006357 4.1e-74 285.0 884 27.1
ClCG01G016710 Citrullus lanatus HOM05D006144 ORTHO05D006357 7.0e-74 284.3 840 29.2
CsaV3_6G043130 Cucumis sativus L. HOM05D006144 ORTHO05D006357 1.2e-73 283.5 818 28.1
CDE03G0440 Ceratophyllum demersum HOM05D006144 ORTHO05D006357 2.7e-73 282.3 785 27.4
Hund13563 Selenicereus undatus HOM05D006144 ORTHO05D006357 2.9e-72 278.9 817 27.7
EL10Ac6g15152 Beta vulgaris HOM05D006144 ORTHO05D006357 6.5e-72 277.7 804 27.6
Sc03g0001430 Simmondsia chinensis HOM05D006144 ORTHO05D006357 1.5e-71 276.6 805 26.7
Sed0018548 Sechium edule HOM05D006144 ORTHO05D006357 1.9e-71 276.2 801 28.2
AUR62001952 Chenopodium quinoa HOM05D006144 ORTHO05D006357 1.2e-70 273.5 851 26.7
SEGI_14166 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 1.2e-68 266.9 595 31.4
THA.LOC104826201 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 1.2e-68 266.9 805 27.8
Dinv29969 Davidia involucrata HOM05D006144 ORTHO05D006357 5.7e-68 264.6 810 28.4
Ah.03g144510 Amaranthus hybridus HOM05D006144 ORTHO05D006357 5.4e-66 258.1 842 26.4
Dinv39873 Davidia involucrata HOM05D006144 ORTHO05D006357 2.0e-65 256.1 739 29.4
HanXRQChr14g0430551 Helianthus annuus HOM05D006144 ORTHO05D006357 4.3e-63 248.4 820 27.6
ECA232G0891 Erigeron canadensis HOM05D006144 ORTHO05D006357 4.0e-61 241.9 839 26.7
THA.LOC104804508 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 1.7e-59 236.5 781 26.8
Lsat_1_v5_gn_4_167780 Lactuca sativa HOM05D006144 ORTHO05D006357 9.5e-55 220.7 836 25.8
HPP92_004109 Vanilla planifolia HOM05D006144 ORTHO05D006357 1.9e-50 206.5 619 27.3
Lj4A140T30 Lonicera japonica HOM05D006144 ORTHO05D006357 6.0e-49 201.4 390 34.9
Oeu004869.1 Olea europaea HOM05D006144 ORTHO05D006357 2.5e-47 196.1 973 23.6
TAR381G0606 Trochodendron aralioides HOM05D006144 ORTHO05D006357 4.0e-45 188.7 342 36.8
Pp3c26_5160 Physcomitrium patens HOM05D006144 ORTHO05D006357 4.9e-43 181.8 590 29.0
Pp3c4_25960 Physcomitrium patens HOM05D006144 ORTHO05D006357 8.3e-43 181.0 600 28.7
Cpa.g.sc55.182 Carica papaya HOM05D006144 ORTHO05D006357 1.4e-42 180.3 340 33.2
SEGI_17223 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 2.4e-42 179.5 335 35.2
TAR381G1042 Trochodendron aralioides HOM05D006144 ORTHO05D006357 4.6e-41 175.3 365 32.6
PSO675G0817 Papaver somniferum HOM05D006144 ORTHO05D006357 5.1e-40 171.8 346 32.7
Lj4C140T7 Lonicera japonica HOM05D006144 ORTHO05D006357 8.1e-38 164.5 333 31.5
GSVIVG01002633001 Vitis vinifera HOM05D006144 ORTHO05D006357 1.8e-37 163.3 426 28.9
unitig_736.g22372 Utricularia gibba HOM05D006144 ORTHO05D006357 6.8e-37 161.4 335 29.3
Cpa.g.sc55.178 Carica papaya HOM05D006144 ORTHO05D006357 5.4e-34 151.8 383 31.6
Psat4g089200 Pisum sativum HOM05D006144 ORTHO05D006357 7.8e-33 147.9 501 26.1
TPR.G640 Trifolium pratense HOM05D006144 ORTHO05D006357 3.0e-32 146.0 346 28.0
Ca_22186_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 1.8e-29 136.7 376 27.4
CBR_g31222 Chara braunii HOM05D006144 ORTHO05D006357 9.9e-28 131.0 505 27.1
PSO541G4136 Papaver somniferum HOM05D006144 ORTHO05D006357 1.4e-26 127.1 379 28.5
MCO09G582 Micromonas commoda HOM05D006144 ORTHO05D006357 5.4e-26 125.2 408 27.2
Hma1.2p1_1415F.1_g282000 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 5.4e-18 98.6 314 26.8
MSTRG.23764 Avicennia marina HOM05D006144 ORTHO05D006357 1.7e-16 93.6 331 23.9
AUR62013383 Chenopodium quinoa HOM05D006144 ORTHO05D006017 1.3e-14 87.4 177 31.1
AUR62039591 Chenopodium quinoa HOM05D006144 ORTHO05D006357 1.6e-14 87.0 177 30.5
AagrBONN_evm.TU.Sc2ySwM_228.442 Anthoceros agrestis HOM05D006144 ORTHO05D006357 2.4e-13 83.2 1189 24.4


User provided reference genes

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