Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 4.3e-133 478.0 244 100.0
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 4.5e-50 202.2 156 64.1
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 1.2e-45 187.6 117 70.1
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 2.4e-43 179.9 164 57.9
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 3.5e-42 176.0 112 71.4
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 7.7e-42 174.9 228 43.9
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 2.5e-40 169.9 131 61.1
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 4.2e-40 169.1 131 61.1
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 2.8e-39 166.4 112 67.9
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 3.6e-39 166.0 141 56.7
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 4.7e-39 165.6 141 56.7
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 4.7e-39 165.6 141 56.7
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 4.7e-39 165.6 114 66.7
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 4.7e-39 165.6 112 67.9
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 6.1e-39 165.2 131 60.3
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 6.1e-39 165.2 131 58.0
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 6.1e-39 165.2 141 56.7
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 1.0e-38 164.5 131 58.8
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 1.4e-38 164.1 122 61.5
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 1.4e-38 164.1 122 61.5
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 1.4e-38 164.1 112 67.0
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 1.4e-38 164.1 139 56.1
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 1.4e-38 164.1 139 56.1
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 1.4e-38 164.1 131 59.5
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 1.8e-38 163.7 112 67.0
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 2.3e-38 163.3 131 58.8
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 2.3e-38 163.3 112 66.1
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 2.3e-38 163.3 112 66.1
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 3.0e-38 162.9 112 67.0
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 3.0e-38 162.9 112 66.1
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 3.0e-38 162.9 112 66.1
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 3.0e-38 162.9 112 66.1
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 3.0e-38 162.9 122 61.5
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 4.0e-38 162.5 122 60.7
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 4.0e-38 162.5 131 58.0
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 4.0e-38 162.5 112 66.1
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 5.2e-38 162.2 112 67.0
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 6.8e-38 161.8 122 59.8
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 6.8e-38 161.8 122 59.8
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 6.8e-38 161.8 122 59.8
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 6.8e-38 161.8 122 59.8
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 6.8e-38 161.8 122 59.8
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 6.8e-38 161.8 112 67.0
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 6.8e-38 161.8 122 61.5
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 6.8e-38 161.8 129 60.5
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 8.9e-38 161.4 131 58.0
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 8.9e-38 161.4 112 66.1
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 1.2e-37 161.0 141 55.3
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 1.5e-37 160.6 112 64.3
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 1.5e-37 160.6 131 57.3
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 1.5e-37 160.6 134 56.7
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 1.5e-37 160.6 114 63.2
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 1.5e-37 160.6 112 66.1
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 2.0e-37 160.2 113 62.8
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 2.6e-37 159.8 132 59.1
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 3.4e-37 159.5 131 56.5
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 3.4e-37 159.5 112 64.3
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 3.4e-37 159.5 131 58.0
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 3.4e-37 159.5 131 58.0
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 4.4e-37 159.1 112 62.5
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 4.4e-37 159.1 131 56.5
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 4.4e-37 159.1 112 64.3
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 4.4e-37 159.1 141 54.6
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 5.7e-37 158.7 132 57.6
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 5.7e-37 158.7 132 57.6
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 5.7e-37 158.7 131 57.3
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 7.5e-37 158.3 112 64.3
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 7.5e-37 158.3 129 58.9
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 7.5e-37 158.3 112 64.3
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 9.8e-37 157.9 112 63.4
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 9.8e-37 157.9 112 63.4
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 9.8e-37 157.9 116 62.9
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 9.8e-37 157.9 129 58.9
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 9.8e-37 157.9 145 51.7
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 1.3e-36 157.5 131 56.5
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 1.3e-36 157.5 134 56.7
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 1.7e-36 157.1 131 55.7
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 1.7e-36 157.1 112 63.4
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 2.2e-36 156.8 112 63.4
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 2.2e-36 156.8 112 65.2
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 2.8e-36 156.4 112 63.4
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 3.7e-36 156.0 112 63.4
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 4.9e-36 155.6 146 52.7
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 4.9e-36 155.6 112 64.3
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 4.9e-36 155.6 137 55.5
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 4.9e-36 155.6 112 62.5
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 6.3e-36 155.2 112 64.3
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 6.3e-36 155.2 116 61.2
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 6.3e-36 155.2 131 55.7
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.1e-35 154.5 139 53.2
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 1.1e-35 154.5 123 59.3
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 1.1e-35 154.5 112 63.4
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 1.4e-35 154.1 145 51.0
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 1.8e-35 153.7 112 63.4
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 2.4e-35 153.3 112 61.6
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 3.1e-35 152.9 160 50.0
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 9.2e-35 151.4 112 61.6
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 2.0e-34 150.2 112 59.8
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 2.0e-34 150.2 112 60.7
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 3.1e-30 136.3 97 63.9
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.2e-29 134.4 141 49.6
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 6.0e-26 122.1 88 61.4
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 1.8e-22 110.5 94 57.4
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 8.9e-22 108.2 78 64.1
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 9.2e-19 98.2 92 51.1
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 9.5e-16 88.2 139 38.8
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 1.6e-15 87.4 84 46.4
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 5.8e-13 79.0 61 59.0
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 4.9e-12 75.9 75 49.3


User provided reference genes

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