Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0062s0101 Marchantia polymorpha HOM05D014630 ORTHO05D019289 1.5e-101 372.9 183 100.0
Mapoly0117s0013 Marchantia polymorpha HOM05D014630 ORTHO05D019289 1.7e-94 349.4 183 94.0
Mapoly0117s0014 Marchantia polymorpha HOM05D014630 ORTHO05D019289 6.3e-89 330.9 177 89.3
Mapoly0117s0016 Marchantia polymorpha HOM05D014630 ORTHO05D019289 1.2e-79 300.1 176 85.2
Mapoly0117s0015 Marchantia polymorpha HOM05D014630 ORTHO05D019289 2.7e-79 298.9 176 79.5
Mapoly0117s0017 Marchantia polymorpha HOM05D014630 ORTHO05D019289 5.2e-75 284.6 180 77.8
Mapoly0117s0018 Marchantia polymorpha HOM05D014630 ORTHO05D019289 8.9e-75 283.9 173 81.5
Mapoly0016s0063 Marchantia polymorpha HOM05D014630 ORTHO05D019289 1.4e-19 100.5 184 33.7
Mapoly0078s0058 Marchantia polymorpha HOM05D014630 ORTHO05D000099 8.2e-12 74.7 151 36.4
Mapoly0006s0217 Marchantia polymorpha HOM05D014630 ORTHO05D000099 3.4e-10 69.3 158 32.9
SEGI_17706 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 1.0e-09 67.8 155 34.8
SMO347G0300 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 6.5e-09 65.1 141 33.3
SEGI_40814 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 1.1e-08 64.3 130 31.5
CSS0006406 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 5.5e-08 62.0 156 30.8
FAN27G3186 Fragaria x ananassa HOM05D000180 ORTHO05D000099 5.5e-08 62.0 122 32.0
SalBow6G2900 Salvia bowleyana HOM05D000180 ORTHO05D000099 1.6e-07 60.5 144 28.5
MSTRG.5439 Avicennia marina HOM05D000180 ORTHO05D000099 3.6e-07 59.3 148 30.4
COL.COLO4_30591 Corchorus olitorius HOM05D000180 ORTHO05D000099 3.6e-07 59.3 148 25.7
Os03g0400200 Oryza sativa ssp. japonica HOM05D000180 ORTHO05D000099 3.6e-07 59.3 172 29.1
CSS0048417 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 4.6e-07 58.9 156 30.8
SalBow6G0351 Salvia bowleyana HOM05D000180 ORTHO05D000099 4.6e-07 58.9 179 30.2
ATR0810G002 Amborella trichopoda HOM05D000180 ORTHO05D000099 6.1e-07 58.5 124 29.8
ATR0810G295 Amborella trichopoda HOM05D000180 ORTHO05D000099 6.1e-07 58.5 124 29.8
PSO541G0252 Papaver somniferum HOM05D000180 ORTHO05D000099 6.1e-07 58.5 137 29.9
ATR0081G048 Amborella trichopoda HOM05D000180 ORTHO05D000099 7.9e-07 58.2 141 31.9
BcaC05g26195 Brassica carinata HOM05D000180 ORTHO05D000099 7.9e-07 58.2 174 26.4
C05p22000 Brassica napus HOM05D000180 ORTHO05D000099 7.9e-07 58.2 174 26.4
VMungo0331G1833 Vigna mungo HOM05D000180 ORTHO05D000099 7.9e-07 58.2 153 26.8
Eucgr.A02487 Eucalyptus grandis HOM05D000180 ORTHO05D000099 1.0e-06 57.8 120 32.5
SGA_v2.0_scaffold207G41896 Striga asiatica HOM05D000180 ORTHO05D000099 1.0e-06 57.8 125 32.8
BolC5t30897H Brassica oleracea HOM05D000180 ORTHO05D000099 1.4e-06 57.4 174 26.4
ECA248G3820 Erigeron canadensis HOM05D000180 ORTHO05D000099 1.4e-06 57.4 143 28.7
PSO675G6155 Papaver somniferum HOM05D000180 ORTHO05D000099 1.4e-06 57.4 137 30.7
Psat0ss8330g0240 Pisum sativum HOM05D000180 ORTHO05D000099 1.4e-06 57.4 131 30.5
SalBow1G0434 Salvia bowleyana HOM05D000180 ORTHO05D000099 1.4e-06 57.4 143 27.3
Ah.13g075610 Amaranthus hybridus HOM05D000180 ORTHO05D000099 1.8e-06 57.0 122 33.6
ATR0810G236 Amborella trichopoda HOM05D000180 ORTHO05D000099 1.8e-06 57.0 123 31.7
PSO541G0521 Papaver somniferum HOM05D000180 ORTHO05D000099 1.8e-06 57.0 138 29.7
SEGI_28710 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 1.8e-06 57.0 122 33.6
Ah.12g065140 Amaranthus hybridus HOM05D000180 ORTHO05D000099 2.3e-06 56.6 157 24.8
ATR0810G065 Amborella trichopoda HOM05D000180 ORTHO05D000099 2.3e-06 56.6 123 30.9
COL.COLO4_17291 Corchorus olitorius HOM05D000180 ORTHO05D000099 2.3e-06 56.6 122 27.0
RcHm_v2.0_Chr6g0294451 Rosa chinensis HOM05D008003 ORTHO05D010079 2.3e-06 56.6 151 27.8
SMO147G0293 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 2.3e-06 56.6 128 28.9
SMO367G1050 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 2.3e-06 56.6 157 29.9
Cfa009617 Carpinus fangiana HOM05D000180 ORTHO05D000099 3.0e-06 56.2 164 27.4
PSO675G7216 Papaver somniferum HOM05D000180 ORTHO05D000099 3.0e-06 56.2 138 29.7
QL02p007150 Quercus lobata HOM05D008003 ORTHO05D010079 3.0e-06 56.2 88 35.2
SMO331G0078 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 3.0e-06 56.2 126 27.0
Zm00001eb408140 Zea mays HOM05D000180 ORTHO05D000099 3.0e-06 56.2 144 30.6
Zm00001eb408210 Zea mays HOM05D000180 ORTHO05D000099 3.0e-06 56.2 144 30.6
ATR0081G021 Amborella trichopoda HOM05D000180 ORTHO05D000099 3.9e-06 55.8 141 30.5
ATR0810G169 Amborella trichopoda HOM05D000180 ORTHO05D000099 3.9e-06 55.8 123 31.7
MSTRG.18525 Avicennia marina HOM05D000180 ORTHO05D000099 3.9e-06 55.8 153 26.1
FvH4_2g01680 Fragaria vesca HOM05D000180 ORTHO05D000099 3.9e-06 55.8 144 28.5
FAN24G2561 Fragaria x ananassa HOM05D000180 ORTHO05D000099 3.9e-06 55.8 144 28.5
HanXRQChr02g0043641 Helianthus annuus HOM05D000180 ORTHO05D000099 3.9e-06 55.8 154 28.6
PSO541G1921 Papaver somniferum HOM05D000180 ORTHO05D000099 3.9e-06 55.8 123 32.5
SEGI_30918 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 3.9e-06 55.8 146 32.9
TPR.G25405 Trifolium pratense HOM05D000180 ORTHO05D000099 3.9e-06 55.8 123 31.7
ATR0810G273 Amborella trichopoda HOM05D000180 ORTHO05D000099 5.1e-06 55.5 145 31.0
CANSAT64G1873 Cannabis sativa HOM05D000180 ORTHO05D000099 5.1e-06 55.5 134 32.1
SMO367G0602 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 5.1e-06 55.5 124 32.3
AagrBONN_evm.TU.Sc2ySwM_344.2528 Anthoceros agrestis HOM05D019072 ORTHO05D000099 6.7e-06 55.1 147 29.3
CSS0020163 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 6.7e-06 55.1 151 31.1
Cfa009619 Carpinus fangiana HOM05D000180 ORTHO05D000099 6.7e-06 55.1 163 26.4
Thhalv10006492m.g Eutrema salsugineum HOM05D000180 ORTHO05D000099 6.7e-06 55.1 145 27.6
Gohir.A12G184300 Gossypium hirsutum HOM05D000180 ORTHO05D000099 6.7e-06 55.1 150 30.7
PSO384G3515 Papaver somniferum HOM05D000180 ORTHO05D000099 6.7e-06 55.1 139 29.5
PSO541G1206 Papaver somniferum HOM05D000180 ORTHO05D000099 6.7e-06 55.1 139 31.7
PSO675G6564 Papaver somniferum HOM05D000180 ORTHO05D000099 6.7e-06 55.1 142 29.6
SMO304G0105 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 6.7e-06 55.1 132 33.3
GSVIVG01009625001 Vitis vinifera HOM05D000499 ORTHO05D007471 6.7e-06 55.1 100 35.0
ATR0810G154 Amborella trichopoda HOM05D000180 ORTHO05D000099 8.8e-06 54.7 122 34.4
Ca_21440_v3 Cicer arietinum L. HOM05D000180 ORTHO05D000099 8.8e-06 54.7 163 27.0
Duzib116G0363 Durio zibethinus HOM05D008003 ORTHO05D010079 8.8e-06 54.7 122 32.8
HanXRQChr01g0024961 Helianthus annuus HOM05D000180 ORTHO05D000099 8.8e-06 54.7 122 32.0
Phvul.010G063600 Phaseolus vulgaris HOM05D000180 ORTHO05D000099 8.8e-06 54.7 153 26.1
Rhsim07G0062500 Rhododendron simsii HOM05D000180 ORTHO05D000099 8.8e-06 54.7 156 25.6


User provided reference genes

Program Settings