Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 4.6e-77 291.2 151 100.0
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 4.8e-34 148.3 85 88.2
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 1.7e-15 86.7 74 58.1
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 1.1e-14 84.0 83 47.0
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 9.4e-14 80.9 78 52.6
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 1.6e-13 80.1 95 43.2
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 2.1e-13 79.7 78 48.7
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 4.7e-13 78.6 101 42.6
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 8.0e-13 77.8 98 41.8
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 1.8e-12 76.6 78 51.3
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 3.0e-12 75.9 83 42.2
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 6.7e-12 74.7 121 36.4
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 6.7e-12 74.7 121 36.4
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 8.8e-12 74.3 78 47.4
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 8.8e-12 74.3 78 44.9
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 8.8e-12 74.3 78 46.2
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 1.2e-11 73.9 82 41.5
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 1.2e-11 73.9 78 43.6
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 1.5e-11 73.6 78 42.3
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 1.5e-11 73.6 80 40.0
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 1.5e-11 73.6 107 38.3
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 1.5e-11 73.6 81 45.7
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 2.6e-11 72.8 109 39.4
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 2.6e-11 72.8 78 44.9
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 2.6e-11 72.8 82 41.5
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 3.3e-11 72.4 92 43.5
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 3.3e-11 72.4 78 42.3
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 3.3e-11 72.4 78 46.2
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 3.3e-11 72.4 78 44.9
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 3.3e-11 72.4 82 40.2
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 4.4e-11 72.0 78 42.3
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 4.4e-11 72.0 74 45.9
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 4.4e-11 72.0 84 42.9
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 4.4e-11 72.0 78 46.2
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 5.7e-11 71.6 78 43.6
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 7.5e-11 71.2 78 44.9
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 7.5e-11 71.2 112 35.7
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 7.5e-11 71.2 78 46.2
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 7.5e-11 71.2 78 43.6
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 7.5e-11 71.2 99 38.4
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 7.5e-11 71.2 78 43.6
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 9.7e-11 70.9 82 39.0
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 1.3e-10 70.5 78 42.3
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 1.3e-10 70.5 78 42.3
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.3e-10 70.5 79 41.8
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 1.3e-10 70.5 78 41.0
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 1.3e-10 70.5 78 44.9
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 1.3e-10 70.5 78 46.2
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 1.3e-10 70.5 114 32.5
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 1.3e-10 70.5 77 45.5
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 1.3e-10 70.5 77 45.5
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 1.7e-10 70.1 78 43.6
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 1.7e-10 70.1 109 39.4
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 1.7e-10 70.1 82 37.8
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 1.7e-10 70.1 97 41.2
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 2.2e-10 69.7 115 33.9
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 2.2e-10 69.7 119 36.1
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 2.2e-10 69.7 77 44.2
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 2.8e-10 69.3 81 48.1
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 2.8e-10 69.3 78 42.3
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 2.8e-10 69.3 78 46.2
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 3.7e-10 68.9 78 42.3
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 4.8e-10 68.6 73 42.5
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 4.8e-10 68.6 78 41.0
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 8.2e-10 67.8 80 40.0
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 8.2e-10 67.8 78 41.0
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 8.2e-10 67.8 80 37.5
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 8.2e-10 67.8 78 39.7
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 1.1e-09 67.4 121 33.9
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 1.1e-09 67.4 78 42.3
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 1.4e-09 67.0 77 37.7
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 1.8e-09 66.6 70 44.3
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 1.8e-09 66.6 78 39.7
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 2.4e-09 66.2 80 40.0
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 3.1e-09 65.9 71 40.8
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 4.1e-09 65.5 80 38.8
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 4.1e-09 65.5 70 41.4
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 4.1e-09 65.5 78 38.5
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 7.0e-09 64.7 55 50.9
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 1.2e-08 63.9 80 37.5
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 1.2e-08 63.9 55 54.5
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 1.6e-08 63.5 122 32.8
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 1.6e-08 63.5 64 43.8
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 1.6e-08 63.5 78 38.5
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.6e-08 63.5 55 47.3
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 2.0e-08 63.2 80 38.8
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 2.0e-08 63.2 80 38.8
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 7.7e-08 61.2 76 39.5
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 1.3e-07 60.5 80 36.2
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 1.3e-07 60.5 80 36.2
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 1.1e-06 57.4 67 44.8
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 1.5e-06 57.0 65 36.9
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 3.2e-06 55.8 54 46.3


User provided reference genes

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