Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 1.5e-272 942.2 451 100.0
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 1.5e-168 596.7 431 65.4
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 1.5e-160 570.1 444 62.2
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 4.1e-121 439.1 398 53.5
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 5.3e-121 438.7 379 55.7
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 2.0e-120 436.8 422 52.1
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 1.0e-119 434.5 382 54.5
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 2.2e-119 433.3 381 55.4
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 2.9e-119 433.0 376 56.4
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 3.8e-119 432.6 379 55.4
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 5.0e-119 432.2 379 54.9
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 6.5e-119 431.8 381 54.9
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 8.5e-119 431.4 379 54.4
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 1.4e-118 430.6 379 55.1
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 1.9e-118 430.3 381 55.1
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 2.5e-118 429.9 381 53.8
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 4.2e-118 429.1 379 54.9
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 5.5e-118 428.7 379 53.8
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 5.5e-118 428.7 385 53.8
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 7.2e-118 428.3 385 53.8
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 9.4e-118 427.9 415 51.8
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 1.2e-117 427.6 377 55.2
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 1.6e-117 427.2 379 54.6
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 1.6e-117 427.2 397 52.4
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 1.6e-117 427.2 381 54.3
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 2.1e-117 426.8 379 54.4
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 6.1e-117 425.2 402 52.5
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 7.9e-117 424.9 381 54.9
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 7.9e-117 424.9 381 54.9
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 1.0e-116 424.5 385 53.5
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 1.4e-116 424.1 379 54.6
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 1.4e-116 424.1 379 54.4
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 1.4e-116 424.1 422 50.5
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 1.4e-116 424.1 402 52.0
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.8e-116 423.7 381 54.6
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 1.8e-116 423.7 381 54.1
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 2.3e-116 423.3 381 54.1
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 3.0e-116 422.9 386 53.6
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 3.9e-116 422.5 409 52.3
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 5.1e-116 422.2 381 53.3
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.5e-115 420.6 409 52.1
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 2.0e-115 420.2 379 53.3
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 2.0e-115 420.2 381 54.1
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 2.6e-115 419.9 400 51.0
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 3.3e-115 419.5 397 51.4
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 4.4e-115 419.1 379 52.8
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 5.7e-115 418.7 380 52.9
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 9.7e-115 417.9 376 52.9
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 1.3e-114 417.5 379 53.3
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 1.7e-114 417.2 380 52.1
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 1.7e-114 417.2 380 52.9
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 1.7e-114 417.2 385 52.2
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 2.8e-114 416.4 418 50.5
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 3.7e-114 416.0 381 52.0
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 4.8e-114 415.6 390 51.5
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 4.8e-114 415.6 379 53.3
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 8.2e-114 414.8 379 52.2
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 1.4e-113 414.1 385 51.7
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 1.4e-113 414.1 379 53.0
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.4e-113 414.1 379 53.0
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.4e-113 414.1 379 53.0
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 1.4e-113 414.1 392 52.3
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 2.4e-113 413.3 383 52.0
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 4.1e-113 412.5 371 53.4
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.1e-113 412.5 379 52.8
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.1e-113 412.5 379 52.8
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 5.3e-113 412.1 402 50.7
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 9.1e-113 411.4 384 51.6
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 9.1e-113 411.4 392 50.5
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 1.2e-112 411.0 408 51.2
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 1.5e-112 410.6 376 51.9
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 1.5e-112 410.6 376 51.9
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 2.6e-112 409.8 385 51.2
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 3.5e-112 409.5 383 51.4
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 4.5e-112 409.1 376 51.9
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 4.5e-112 409.1 379 51.7
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 5.9e-112 408.7 376 51.6
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 5.9e-112 408.7 376 51.6
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 5.9e-112 408.7 376 52.9
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 5.9e-112 408.7 376 52.9
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 5.9e-112 408.7 372 53.2
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 1.3e-111 407.5 384 51.8
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 5.0e-111 405.6 384 51.3
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 5.0e-111 405.6 376 51.3
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 8.5e-111 404.8 376 51.3
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 8.5e-111 404.8 449 46.5
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 1.1e-110 404.4 391 51.9
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 1.4e-110 404.1 359 54.9
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.2e-110 402.9 391 51.2
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 4.2e-110 402.5 384 50.8
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 2.7e-109 399.8 351 55.3
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 1.4e-108 397.5 404 48.0
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 3.9e-108 396.0 388 49.0
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 2.0e-107 393.7 389 49.9
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 2.6e-107 393.3 392 48.7
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 3.8e-103 379.4 367 49.6
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 3.6e-101 372.9 379 48.3
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 8.0e-101 371.7 395 48.4
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 1.0e-100 371.3 379 47.0
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 4.0e-100 369.4 379 48.8
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 4.0e-100 369.4 396 46.7
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 3.3e-99 366.3 323 54.8
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 7.5e-99 365.2 380 48.2
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 7.7e-96 355.1 398 44.5
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 4.2e-94 349.4 282 56.7
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 4.1e-89 332.8 336 47.9
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 2.0e-88 330.5 385 44.7
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 2.8e-69 266.9 249 51.8
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 2.4e-36 157.5 119 59.7
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 2.9e-34 150.6 323 33.4
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.2e-32 145.2 124 55.6
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 3.3e-30 137.1 162 43.2
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 1.5e-11 75.1 112 43.8
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 5.0e-10 70.1 81 35.8
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 1.1e-09 68.9 75 37.3
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 3.2e-09 67.4 63 50.8
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 3.0e-07 60.8 70 31.4


User provided reference genes

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