Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 1.3e-142 509.6 248 100.0
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 1.7e-52 210.3 204 50.5
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 5.4e-51 205.3 208 50.5
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 9.3e-51 204.5 204 48.5
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 1.2e-50 204.1 204 50.5
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 1.6e-50 203.8 207 47.3
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 2.1e-50 203.4 195 52.3
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 2.1e-50 203.4 206 51.0
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 3.5e-50 202.6 213 46.9
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 3.5e-50 202.6 205 50.7
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 3.5e-50 202.6 208 46.2
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 4.6e-50 202.2 195 52.8
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 6.0e-50 201.8 209 49.3
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 6.0e-50 201.8 200 54.5
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 6.0e-50 201.8 204 50.0
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 6.0e-50 201.8 209 46.4
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 7.8e-50 201.4 208 48.6
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 1.0e-49 201.1 197 50.3
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 1.3e-49 200.7 227 44.5
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 1.3e-49 200.7 208 47.6
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 1.3e-49 200.7 208 47.1
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 1.7e-49 200.3 208 46.2
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 1.7e-49 200.3 199 49.2
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 2.3e-49 199.9 209 47.4
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 3.0e-49 199.5 212 49.1
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 5.1e-49 198.7 209 47.4
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 5.1e-49 198.7 205 47.3
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 6.6e-49 198.4 195 50.8
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 1.1e-48 197.6 209 47.4
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 1.5e-48 197.2 212 52.4
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 1.5e-48 197.2 208 46.6
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 1.9e-48 196.8 208 48.6
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 2.5e-48 196.4 222 45.5
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 2.5e-48 196.4 201 47.8
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 3.3e-48 196.1 218 46.8
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 3.3e-48 196.1 210 48.1
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 3.3e-48 196.1 211 46.4
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 4.3e-48 195.7 210 45.2
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 5.6e-48 195.3 197 48.7
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 7.3e-48 194.9 208 46.2
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 9.6e-48 194.5 207 46.4
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 9.6e-48 194.5 216 45.8
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 1.3e-47 194.1 203 48.3
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 1.3e-47 194.1 204 48.0
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 1.6e-47 193.7 205 46.3
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 1.6e-47 193.7 205 46.8
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 1.6e-47 193.7 204 47.5
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 1.6e-47 193.7 208 47.1
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 1.6e-47 193.7 221 43.9
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 2.8e-47 193.0 209 45.0
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 2.8e-47 193.0 194 51.0
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 3.6e-47 192.6 199 48.7
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 4.8e-47 192.2 197 50.8
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 4.8e-47 192.2 201 50.2
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 6.2e-47 191.8 199 48.7
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 8.1e-47 191.4 203 48.8
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 8.1e-47 191.4 205 45.9
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 1.1e-46 191.0 209 47.8
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 1.1e-46 191.0 208 45.7
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 1.1e-46 191.0 210 47.1
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 1.4e-46 190.7 209 47.8
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 1.4e-46 190.7 203 48.3
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 1.4e-46 190.7 201 46.8
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 1.4e-46 190.7 201 46.8
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 1.4e-46 190.7 210 47.1
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 1.4e-46 190.7 210 46.7
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 1.8e-46 190.3 208 45.7
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 2.4e-46 189.9 232 42.7
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 2.4e-46 189.9 200 47.5
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 2.4e-46 189.9 200 47.0
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 2.4e-46 189.9 208 46.2
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 3.1e-46 189.5 208 45.2
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 1.2e-45 187.6 203 47.8
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 1.2e-45 187.6 203 47.8
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 1.5e-45 187.2 215 46.5
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 1.5e-45 187.2 166 56.0
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 2.6e-45 186.4 218 44.0
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 4.9e-44 182.2 186 47.8
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 6.4e-44 181.8 205 43.4
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 4.2e-43 179.1 195 46.7
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 4.2e-43 179.1 212 46.7
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 5.4e-43 178.7 206 45.1
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 1.6e-42 177.2 197 45.2
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 2.7e-42 176.4 204 46.1
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 1.3e-41 174.1 195 46.2
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 1.3e-41 174.1 206 43.2
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 2.3e-41 173.3 196 45.9
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 1.1e-40 171.0 204 46.1
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 3.3e-40 169.5 161 49.1
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 3.7e-39 166.0 194 43.8
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 8.1e-39 164.9 194 43.8
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 5.8e-37 158.7 223 40.8
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 8.4e-36 154.8 210 41.4
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 4.2e-35 152.5 171 43.3
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 9.3e-35 151.4 179 43.6
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 4.6e-34 149.1 154 47.4
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 2.5e-32 143.3 162 45.1
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 5.6e-32 142.1 167 46.1
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 2.8e-31 139.8 163 42.9
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 4.8e-31 139.0 222 38.3
FAN02G0118 Fragaria x ananassa HOM05D007137 ORTHO05D008982 8.2e-31 138.3 131 51.9
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 2.2e-23 113.6 97 54.6
Hma1.2p1_2520F.1_g323835 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 1.1e-22 111.3 100 52.0
Zm00001eb286980 Zea mays HOM05D007137 ORTHO05D008982 1.5e-16 90.9 74 55.4
SEGI_00420 Sequoiadendron giganteum HOM05D007137 ORTHO05D008982 7.4e-16 88.6 82 50.0
CSS0024811 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.3e-12 77.8 82 50.0
Cre04.g217912 Chlamydomonas reinhardtii HOM05D007137 ORTHO05D008982 2.9e-12 76.6 93 45.2
VMungo0720G0821 Vigna mungo HOM05D007137 ORTHO05D008982 3.2e-11 73.2 87 46.0
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 1.4e-09 67.8 94 40.4


User provided reference genes

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