Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0062s0031 Marchantia polymorpha HOM05D005322 ORTHO05D006746 0.0e+00 1417.9 813 100.0
MBI16_g26241_MAGBIO Magnolia biondii HOM05D005322 ORTHO05D006746 3.2e-23 114.8 267 33.7
AagrBONN_evm.TU.Sc2ySwM_368.532 Anthoceros agrestis HOM05D005322 ORTHO05D006746 5.1e-21 107.5 292 30.5
SGA_v2.0_scaffold76G25043 Striga asiatica HOM05D005322 ORTHO05D006746 1.5e-20 105.9 445 26.3
SEGI_16708 Sequoiadendron giganteum HOM05D005322 ORTHO05D006746 4.3e-20 104.4 244 28.7
Gohir.A11G049800 Gossypium hirsutum HOM05D005322 ORTHO05D006746 9.5e-20 103.2 289 29.8
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 9.5e-20 103.2 304 28.6
Gorai.007G058000 Gossypium raimondii HOM05D005322 ORTHO05D006746 2.1e-19 102.1 271 30.3
Hund25262 Selenicereus undatus HOM05D005322 ORTHO05D006746 3.6e-19 101.3 295 29.5
Potri.006G280800 Populus trichocarpa HOM05D005322 ORTHO05D006746 6.2e-19 100.5 318 28.0
PSO210G4083 Papaver somniferum HOM05D005322 ORTHO05D006746 3.1e-18 98.2 293 29.0
Manes.12G121000 Manihot esculenta HOM05D005322 ORTHO05D006746 4.0e-18 97.8 274 32.1
CSS0048225 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 5.2e-18 97.4 318 28.0
FAN23G1375 Fragaria x ananassa HOM05D005322 ORTHO05D006746 5.2e-18 97.4 317 26.2
Gohir.D11G053300 Gossypium hirsutum HOM05D005322 ORTHO05D006746 8.9e-18 96.7 248 31.5
Aa31LG6G14810 Aethionema arabicum HOM05D005322 ORTHO05D006746 1.2e-17 96.3 307 27.7
PSO761G0065 Papaver somniferum HOM05D005322 ORTHO05D006746 1.2e-17 96.3 249 30.5
MD15G1306300 Malus domestica HOM05D005322 ORTHO05D006746 1.5e-17 95.9 261 29.1
Manes.13G104500 Manihot esculenta HOM05D005322 ORTHO05D006746 2.0e-17 95.5 273 31.1
Gohir.D03G034100 Gossypium hirsutum HOM05D005322 ORTHO05D006746 2.6e-17 95.1 261 31.4
CSS0004865 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 3.4e-17 94.7 265 30.2
CSS0043740 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 3.4e-17 94.7 265 30.2
Rhsim07G0215300 Rhododendron simsii HOM05D005322 ORTHO05D006746 4.4e-17 94.4 286 28.3
Potri.018G000700 Populus trichocarpa HOM05D005322 ORTHO05D006746 5.8e-17 94.0 251 29.9
MSTRG.8297 Avicennia marina HOM05D005322 ORTHO05D006746 9.9e-17 93.2 580 24.3
AUR62044121 Chenopodium quinoa HOM05D005322 ORTHO05D006746 9.9e-17 93.2 274 28.5
MD01G1045600 Malus domestica HOM05D005322 ORTHO05D006746 9.9e-17 93.2 237 31.2
Nitab4.5_0002103g0070 Nicotiana tabacum HOM05D005322 ORTHO05D006746 9.9e-17 93.2 425 24.5
RcHm_v2.0_Chr2g0109931 Rosa chinensis HOM05D005322 ORTHO05D006746 9.9e-17 93.2 311 25.4
SalBow6G3962 Salvia bowleyana HOM05D005322 ORTHO05D006746 9.9e-17 93.2 277 28.9
Sp5g08900 Schrenkiella parvula HOM05D005322 ORTHO05D006746 9.9e-17 93.2 317 27.4
Thecc.01G083200 Theobroma cacao HOM05D005322 ORTHO05D006746 1.3e-16 92.8 250 29.2
Thhalv10010289m.g Eutrema salsugineum HOM05D005322 ORTHO05D006746 1.7e-16 92.4 317 28.1
TAR381G1522 Trochodendron aralioides HOM05D005322 ORTHO05D006746 1.7e-16 92.4 242 31.4
Cc07_g07800 Coffea canephora HOM05D005322 ORTHO05D006746 2.2e-16 92.0 238 29.8
Sc22g0002020 Simmondsia chinensis HOM05D005322 ORTHO05D006746 2.9e-16 91.7 258 29.5
Gorai.003G035800 Gossypium raimondii HOM05D005322 ORTHO05D006746 4.9e-16 90.9 319 28.2
Ah.02g129230 Amaranthus hybridus HOM05D005322 ORTHO05D006746 6.4e-16 90.5 312 27.2
Ciclev10026033m.g Citrus clementina HOM05D005322 ORTHO05D006746 1.1e-15 89.7 236 30.1
Atru.chr3.1145 Acer truncatum HOM05D005322 ORTHO05D006746 1.4e-15 89.4 243 30.0
Atru.chr3.1164 Acer truncatum HOM05D005322 ORTHO05D006746 1.4e-15 89.4 243 30.0
AL5G34360 Arabidopsis lyrata HOM05D005322 ORTHO05D006746 1.4e-15 89.4 299 26.4
Oeu030825.1 Olea europaea HOM05D005322 ORTHO05D006746 1.4e-15 89.4 291 27.1
Dinv36981 Davidia involucrata HOM05D005322 ORTHO05D006746 1.9e-15 89.0 488 25.4
AUR62002656 Chenopodium quinoa HOM05D005322 ORTHO05D006746 2.4e-15 88.6 237 30.0
Oeu050977.1 Olea europaea HOM05D005322 ORTHO05D006746 2.4e-15 88.6 245 29.0
HPP92_000395 Vanilla planifolia HOM05D005322 ORTHO05D006746 3.2e-15 88.2 406 26.8
BcaB01g00278 Brassica carinata HOM05D005322 ORTHO05D006746 5.4e-15 87.4 309 27.2
C08p28800 Brassica napus HOM05D005322 ORTHO05D006746 5.4e-15 87.4 309 27.2
BolC8t50481H Brassica oleracea HOM05D005322 ORTHO05D006746 5.4e-15 87.4 309 27.2
ClCG01G018150 Citrullus lanatus HOM05D005322 ORTHO05D006746 7.1e-15 87.0 311 26.4
MELO3C007693.2 Cucumis melo HOM05D005322 ORTHO05D006746 7.1e-15 87.0 234 28.2
CARHR163340 Cardamine hirsuta HOM05D005322 ORTHO05D006746 9.2e-15 86.7 342 24.3
Lsat_1_v5_gn_2_82180 Lactuca sativa HOM05D005322 ORTHO05D006746 9.2e-15 86.7 281 27.0
SEGI_41064 Sequoiadendron giganteum HOM05D005322 ORTHO05D006746 9.2e-15 86.7 233 29.2
AT3G53440 Arabidopsis thaliana HOM05D005322 ORTHO05D006746 1.2e-14 86.3 298 25.8
TWI74G0553 Tripterygium wilfordii HOM05D005322 ORTHO05D006746 1.2e-14 86.3 260 29.6
BcaB01g00273 Brassica carinata HOM05D005322 ORTHO05D006746 1.6e-14 85.9 323 27.9
FAN28G0408 Fragaria x ananassa HOM05D005322 ORTHO05D006746 1.6e-14 85.9 420 24.0
Gohir.A02G146400 Gossypium hirsutum HOM05D005322 ORTHO05D006746 1.6e-14 85.9 261 30.3
PGR031G1473 Punica granatum HOM05D005322 ORTHO05D006746 2.1e-14 85.5 414 25.6
Sopen01g030500 Solanum pennellii HOM05D005322 ORTHO05D006746 2.1e-14 85.5 265 26.8
Nn4g23001 Nelumbo nucifera HOM05D005322 ORTHO05D006746 2.7e-14 85.1 281 28.1
Aqoxy5G02272 Aquilegia oxysepala HOM05D005322 ORTHO05D006746 3.5e-14 84.7 298 26.5
A09p46440 Brassica napus HOM05D005322 ORTHO05D006746 3.5e-14 84.7 312 28.2
BraA09t40109Z Brassica rapa HOM05D005322 ORTHO05D006746 3.5e-14 84.7 312 28.2
Lj5A206G51 Lonicera japonica HOM05D005322 ORTHO05D006746 3.5e-14 84.7 423 25.3
THA.LOC104807095 Tarenaya hassleriana HOM05D005322 ORTHO05D006746 3.5e-14 84.7 307 27.7
ATR0807G165 Amborella trichopoda HOM05D005322 ORTHO05D006746 4.6e-14 84.3 131 34.4
CsaV3_6G044720 Cucumis sativus L. HOM05D005322 ORTHO05D006746 4.6e-14 84.3 336 26.2
Nn5g29007 Nelumbo nucifera HOM05D005322 ORTHO05D006746 4.6e-14 84.3 282 28.7
Migut.F01569 Erythranthe guttata HOM05D005322 ORTHO05D006746 6.0e-14 84.0 589 22.6
FvH4_1g18920 Fragaria vesca HOM05D005322 ORTHO05D006746 6.0e-14 84.0 489 23.9
CANSAT11G0958 Cannabis sativa HOM05D005322 ORTHO05D006746 7.8e-14 83.6 280 27.5
Ca_25206_v3 Cicer arietinum L. HOM05D005322 ORTHO05D006746 7.8e-14 83.6 347 28.8
FAN19G2338 Fragaria x ananassa HOM05D005322 ORTHO05D006746 1.0e-13 83.2 489 23.9
EL10Ac6g13300 Beta vulgaris HOM05D005322 ORTHO05D006746 1.7e-13 82.4 404 25.0
ECA238G0277 Erigeron canadensis HOM05D000009 ORTHO05D000008 1.7e-13 82.4 251 28.3
Peaxi162Scf00309g00413 Petunia axillaris HOM05D005322 ORTHO05D006746 1.7e-13 82.4 387 26.1
Glyma.01G019600 Glycine max HOM05D005322 ORTHO05D006746 2.3e-13 82.0 314 27.7
HanXRQChr12g0355811 Helianthus annuus HOM05D005322 ORTHO05D006746 2.3e-13 82.0 253 26.9
Glyma.09G203100 Glycine max HOM05D005322 ORTHO05D006746 3.0e-13 81.6 267 27.3
Lj2g0022469 Lotus japonicus HOM05D005322 ORTHO05D006746 3.0e-13 81.6 325 27.1
CAN.G179.11 Capsicum annuum HOM05D005322 ORTHO05D006746 3.9e-13 81.3 271 26.2
ECA238G4016 Erigeron canadensis HOM05D005322 ORTHO05D006746 5.1e-13 80.9 251 27.5
Medtr5g030750 Medicago truncatula HOM05D005322 ORTHO05D006746 5.1e-13 80.9 233 27.9
Cpa.g.sc129.20 Carica papaya HOM05D005322 ORTHO05D006746 6.6e-13 80.5 302 28.5
Medtr7g076850 Medicago truncatula HOM05D005322 ORTHO05D006746 8.6e-13 80.1 240 27.5
Duzib147G0396 Durio zibethinus HOM05D005322 ORTHO05D006746 1.1e-12 79.7 260 28.1
Zm00001eb297530 Zea mays HOM05D005322 ORTHO05D006746 1.1e-12 79.7 125 35.2
Haze_03937 Corylus avellana HOM05D005322 ORTHO05D006746 1.5e-12 79.3 474 25.9
Prupe.6G210300 Prunus persica HOM05D005322 ORTHO05D006746 1.5e-12 79.3 434 24.2
Carub.0005s2001 Capsella rubella HOM05D005322 ORTHO05D006746 3.3e-12 78.2 463 23.3
Cfa006826 Carpinus fangiana HOM05D005322 ORTHO05D006746 3.3e-12 78.2 485 26.2
Solyc01g068540.3 Solanum lycopersicum HOM05D005322 ORTHO05D006746 3.3e-12 78.2 377 24.4
CDE01G0382 Ceratophyllum demersum HOM05D005322 ORTHO05D006746 4.3e-12 77.8 170 30.6
GSVIVG01008306001 Vitis vinifera HOM05D005322 ORTHO05D006746 5.6e-12 77.4 209 31.1
Duzib264G0018 Durio zibethinus HOM05D005322 ORTHO05D006746 9.6e-12 76.6 240 28.8
arahy.Tifrunner.gnm1.ann1.072AWD Arachis hypogaea HOM05D005322 ORTHO05D006746 1.2e-11 76.3 315 26.3
arahy.Tifrunner.gnm1.ann1.BDDW1F Arachis hypogaea HOM05D005322 ORTHO05D006746 1.2e-11 76.3 315 26.3
THA.LOC104807657 Tarenaya hassleriana HOM05D005322 ORTHO05D006746 2.1e-11 75.5 329 25.8
QL06p037497 Quercus lobata HOM05D005322 ORTHO05D006746 6.2e-11 73.9 474 24.7
vmacro11204 Vaccinium macrocarpon HOM05D005322 ORTHO05D006746 6.2e-11 73.9 336 25.0
CiPaw.07G042000 Carya illinoinensis HOM05D005322 ORTHO05D006746 8.1e-11 73.6 459 24.6
Hma1.2p1_0080F.1_g042150 Hydrangea macrophylla HOM05D005322 ORTHO05D006746 8.1e-11 73.6 435 25.3
PGSC0003DMG400000839 Solanum tuberosum HOM05D000365 ORTHO05D000154 1.1e-10 73.2 254 26.4
ECA232G1574 Erigeron canadensis HOM05D005322 ORTHO05D006746 1.4e-10 72.8 387 24.8
Psat5g132240 Pisum sativum HOM05D005322 ORTHO05D006746 1.4e-10 72.8 261 24.9
Phvul.002G142700 Phaseolus vulgaris HOM05D005322 ORTHO05D006746 6.8e-10 70.5 243 27.2
Zm00001eb345110 Zea mays HOM05D005322 ORTHO05D006746 2.6e-09 68.6 118 33.9
TWI77G0556 Tripterygium wilfordii HOM05D005322 ORTHO05D006746 3.4e-09 68.2 388 25.8
TPR.G30490 Trifolium pratense HOM05D005322 ORTHO05D006746 4.4e-09 67.8 239 27.2
Psat2g134960 Pisum sativum HOM05D005322 ORTHO05D006746 7.6e-09 67.0 423 21.5
unitig_62.g23938 Utricularia gibba HOM05D005322 ORTHO05D006746 2.2e-08 65.5 124 34.7
Actinidia36382 Actinidia chinensis HOM05D005322 ORTHO05D006746 3.8e-08 64.7 95 33.7
Phvul.010G030900 Phaseolus vulgaris HOM05D005322 ORTHO05D006746 3.8e-08 64.7 259 23.9
Sed0015871 Sechium edule HOM05D005322 ORTHO05D006746 4.9e-08 64.3 404 26.0
Actinidia11927 Actinidia chinensis HOM05D005322 ORTHO05D006746 1.1e-07 63.2 68 39.7
Lalb_Chr05g0216181 Lupinus albus HOM05D005322 ORTHO05D006746 1.4e-07 62.8 245 24.5


User provided reference genes

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