Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0061s0085 Marchantia polymorpha HOM05D006492 ORTHO05D008432 0.0e+00 1437.6 749 100.0
Pp3c16_18660 Physcomitrium patens HOM05D006492 ORTHO05D008432 1.3e-63 248.8 689 29.8
SEGI_21616 Sequoiadendron giganteum HOM05D006492 ORTHO05D008432 2.4e-49 201.4 551 29.0
Sc14g0004710 Simmondsia chinensis HOM05D006492 ORTHO05D008432 7.9e-45 186.4 697 25.3
AagrBONN_evm.TU.Sc2ySwM_117.2272 Anthoceros agrestis HOM05D006492 ORTHO05D008432 8.7e-44 183.0 642 26.5
EL10Ac3g06781 Beta vulgaris HOM05D006492 ORTHO05D008432 4.3e-43 180.6 612 27.0
SGA_v2.0_scaffold2G00843 Striga asiatica HOM05D006492 ORTHO05D008432 3.7e-42 177.6 708 24.9
PSO017G3024 Papaver somniferum HOM05D006492 ORTHO05D008432 1.1e-41 176.0 734 25.6
ATR0787G047 Amborella trichopoda HOM05D006492 ORTHO05D008432 1.4e-41 175.6 625 25.8
Thecc.04G212600 Theobroma cacao HOM05D006492 ORTHO05D008432 1.8e-41 175.3 669 27.1
Prupe.1G060300 Prunus persica HOM05D006492 ORTHO05D008432 3.1e-41 174.5 678 25.1
Potri.003G175300 Populus trichocarpa HOM05D006492 ORTHO05D008432 2.0e-40 171.8 660 25.5
CSS0015325 Camellia sinensis var. sinensis HOM05D006492 ORTHO05D008432 4.5e-40 170.6 455 28.1
MBI10_g16832_MAGBIO Magnolia biondii HOM05D006492 ORTHO05D008432 4.5e-40 170.6 574 28.4
MD00G1101100 Malus domestica HOM05D006492 ORTHO05D008432 4.5e-40 170.6 671 25.3
CARHR004030 Cardamine hirsuta HOM05D006492 ORTHO05D008432 5.9e-40 170.2 660 25.3
Hund24849 Selenicereus undatus HOM05D006492 ORTHO05D008432 2.2e-39 168.3 701 25.0
TWI09G1643 Tripterygium wilfordii HOM05D006492 ORTHO05D008432 2.9e-39 167.9 663 26.4
Rhsim09G0049200 Rhododendron simsii HOM05D006492 ORTHO05D008432 3.8e-39 167.5 478 27.0
Oeu051651.1 Olea europaea HOM05D006492 ORTHO05D008432 5.0e-39 167.2 447 28.2
Nn1g03104 Nelumbo nucifera HOM05D006492 ORTHO05D008432 8.4e-39 166.4 612 26.6
TAR365G0557 Trochodendron aralioides HOM05D006492 ORTHO05D008432 1.1e-38 166.0 685 25.4
Dinv38285 Davidia involucrata HOM05D006492 ORTHO05D008432 1.4e-38 165.6 449 28.3
Migut.N00332 Erythranthe guttata HOM05D006492 ORTHO05D008432 1.4e-38 165.6 639 23.8
CANSAT78G0108 Cannabis sativa HOM05D006492 ORTHO05D008432 1.9e-38 165.2 677 25.6
Haze_11549 Corylus avellana HOM05D006492 ORTHO05D008432 1.9e-38 165.2 449 29.6
Cfa014875 Carpinus fangiana HOM05D006492 ORTHO05D008432 4.2e-38 164.1 449 29.0
Ca_10406_v3 Cicer arietinum L. HOM05D006492 ORTHO05D008432 7.2e-38 163.3 454 29.5
ECA233G5226 Erigeron canadensis HOM05D006492 ORTHO05D008432 7.2e-38 163.3 629 26.6
Gohir.D09G053008 Gossypium hirsutum HOM05D006492 ORTHO05D008432 9.3e-38 162.9 692 25.4
vmacro00516 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 9.3e-38 162.9 725 23.3
A08p36780 Brassica napus HOM05D006492 ORTHO05D008432 1.2e-37 162.5 658 23.7
CiPaw.01G204100 Carya illinoinensis HOM05D006492 ORTHO05D008432 1.2e-37 162.5 446 27.8
Gorai.006G055600 Gossypium raimondii HOM05D006492 ORTHO05D008432 1.6e-37 162.2 703 25.0
AUR62035934 Chenopodium quinoa HOM05D006492 ORTHO05D008432 2.1e-37 161.8 684 26.5
BraA08t35581Z Brassica rapa HOM05D006492 ORTHO05D008432 2.7e-37 161.4 658 23.6
Nitab4.5_0012325g0010 Nicotiana tabacum HOM05D006492 ORTHO05D008432 4.6e-37 160.6 447 28.6
QL05p063769 Quercus lobata HOM05D006492 ORTHO05D008432 4.6e-37 160.6 620 26.0
Solyc09g091370.4 Solanum lycopersicum HOM05D006492 ORTHO05D008432 4.6e-37 160.6 612 25.7
MSTRG.24638 Avicennia marina HOM05D006492 ORTHO05D008432 6.1e-37 160.2 628 24.4
Ciclev10004244m.g Citrus clementina HOM05D006492 ORTHO05D008432 6.1e-37 160.2 666 24.2
FvH4_4g05680 Fragaria vesca HOM05D006492 ORTHO05D008432 6.1e-37 160.2 680 24.4
Sp1g03490 Schrenkiella parvula HOM05D006492 ORTHO05D008432 7.9e-37 159.8 663 24.3
FAN12G2087 Fragaria x ananassa HOM05D006492 ORTHO05D008432 1.0e-36 159.5 680 24.3
BolC8t46943H Brassica oleracea HOM05D006492 ORTHO05D008432 1.3e-36 159.1 696 23.3
Carub.0001s0390 Capsella rubella HOM05D006492 ORTHO05D008432 1.3e-36 159.1 648 23.6
Sopen09g034300 Solanum pennellii HOM05D006492 ORTHO05D008432 1.3e-36 159.1 605 25.8
Potri.001G053000 Populus trichocarpa HOM05D006492 ORTHO05D008432 1.8e-36 158.7 642 26.2
C08p01350 Brassica napus HOM05D006492 ORTHO05D008432 2.3e-36 158.3 696 23.4
Duzib212G0418 Durio zibethinus HOM05D006492 ORTHO05D008432 2.3e-36 158.3 644 24.5
Aqoxy2G03837 Aquilegia oxysepala HOM05D006492 ORTHO05D008432 3.0e-36 157.9 636 25.6
FAN22G2187 Fragaria x ananassa HOM05D006492 ORTHO05D008432 3.0e-36 157.9 682 24.3
Peaxi162Scf00047g01324 Petunia axillaris HOM05D006492 ORTHO05D008432 3.0e-36 157.9 542 25.8
arahy.Tifrunner.gnm1.ann1.TP3X9S Arachis hypogaea HOM05D006492 ORTHO05D008432 3.9e-36 157.5 454 28.9
Cc03_g07180 Coffea canephora HOM05D006492 ORTHO05D008432 5.1e-36 157.1 690 24.8
TAR365G0379 Trochodendron aralioides HOM05D006492 ORTHO05D008432 5.1e-36 157.1 685 25.3
Ah.04g153340 Amaranthus hybridus HOM05D006492 ORTHO05D008432 6.7e-36 156.8 530 25.7
Lsat_1_v5_gn_6_62680 Lactuca sativa HOM05D006492 ORTHO05D008432 8.7e-36 156.4 446 28.3
Zm00001eb003580 Zea mays HOM05D006492 ORTHO05D008432 1.1e-35 156.0 612 24.5
Nitab4.5_0000493g0030 Nicotiana tabacum HOM05D006492 ORTHO05D008432 1.9e-35 155.2 639 25.0
FAN07G0933 Fragaria x ananassa HOM05D006492 ORTHO05D008432 2.5e-35 154.8 692 24.7
PSO063G2396 Papaver somniferum HOM05D006492 ORTHO05D008432 4.3e-35 154.1 701 24.1
Lj5g0018955 Lotus japonicus HOM05D006492 ORTHO05D008432 5.7e-35 153.7 457 29.5
Lju414A5T31 Lonicera japonica HOM05D006492 ORTHO05D008432 7.4e-35 153.3 447 27.3
SMO117G0361 Selaginella moellendorffii HOM05D006492 ORTHO05D008432 7.4e-35 153.3 427 27.2
AT1G04650 Arabidopsis thaliana HOM05D006492 ORTHO05D008432 1.6e-34 152.1 649 24.3
Sabra01G0037500 Salix brachista HOM05D006492 ORTHO05D008432 2.2e-34 151.8 645 24.8
TPR.G13408 Trifolium pratense HOM05D006492 ORTHO05D008432 2.2e-34 151.8 456 28.1
Glyma.10G192800 Glycine max HOM05D006492 ORTHO05D008432 2.8e-34 151.4 448 27.5
GSVIVG01029042001 Vitis vinifera HOM05D006492 ORTHO05D008432 2.8e-34 151.4 687 25.2
Glyma.20G197700 Glycine max HOM05D006492 ORTHO05D008432 3.7e-34 151.0 612 25.8
DCAR_002278 Daucus carota HOM05D006492 ORTHO05D008432 4.8e-34 150.6 631 24.2
AL1G14360 Arabidopsis lyrata HOM05D006492 ORTHO05D008432 6.3e-34 150.2 646 23.1
BcaC07g36892 Brassica carinata HOM05D006492 ORTHO05D008432 6.3e-34 150.2 579 25.0
COL.COLO4_34090 Corchorus olitorius HOM05D006492 ORTHO05D008432 6.3e-34 150.2 477 26.6
CAN.G1552.5 Capsicum annuum HOM05D006492 ORTHO05D008432 8.2e-34 149.8 548 26.3
PGR142G2376 Punica granatum HOM05D006492 ORTHO05D008432 8.2e-34 149.8 629 25.0
Eucgr.H00098 Eucalyptus grandis HOM05D006492 ORTHO05D008432 1.8e-33 148.7 444 27.9
Psat6g170280 Pisum sativum HOM05D006492 ORTHO05D008432 1.8e-33 148.7 471 27.4
FAN17G1964 Fragaria x ananassa HOM05D006492 ORTHO05D008432 3.1e-33 147.9 618 24.4
Medtr1g090050 Medicago truncatula HOM05D006492 ORTHO05D008432 4.1e-33 147.5 456 28.9
RcHm_v2.0_Chr4g0396881 Rosa chinensis HOM05D006492 ORTHO05D008432 4.1e-33 147.5 669 23.9
Thhalv10006668m.g Eutrema salsugineum HOM05D006492 ORTHO05D008432 5.3e-33 147.1 663 24.1
VMungo0720G0701 Vigna mungo HOM05D006492 ORTHO05D008432 5.3e-33 147.1 450 26.9
Lalb_Chr21g0312661 Lupinus albus HOM05D006492 ORTHO05D008432 6.9e-33 146.7 456 28.1
Manes.15G049000 Manihot esculenta HOM05D006492 ORTHO05D008432 1.5e-32 145.6 677 23.8
HanXRQChr07g0185861 Helianthus annuus HOM05D006492 ORTHO05D008432 3.4e-32 144.4 447 28.0
Actinidia25080 Actinidia chinensis HOM05D006492 ORTHO05D008432 5.9e-32 143.7 671 23.5
Phvul.007G134600 Phaseolus vulgaris HOM05D006492 ORTHO05D008432 2.2e-31 141.7 450 26.9
unitig_899.g15531 Utricularia gibba HOM05D006492 ORTHO05D008432 2.9e-31 141.4 445 26.7
Cpa.g.sc59.86 Carica papaya HOM05D006492 ORTHO05D008432 3.8e-31 141.0 552 24.5
CBR_g61877 Chara braunii HOM05D006492 ORTHO05D008432 3.8e-31 141.0 644 23.3
SHI00019 Sapria himalayana HOM05D006492 ORTHO05D000009 6.5e-31 140.2 496 26.8
Aa31LG1G20220 Aethionema arabicum HOM05D006492 ORTHO05D008432 4.2e-30 137.5 603 23.2
Os03g0144000 Oryza sativa ssp. japonica HOM05D006492 ORTHO05D008432 5.5e-30 137.1 617 24.1
THA.LOC104816017 Tarenaya hassleriana HOM05D006492 ORTHO05D008432 1.6e-29 135.6 442 26.9
CDE04G0311 Ceratophyllum demersum HOM05D006492 ORTHO05D008432 2.7e-29 134.8 453 25.8
SalBow3G2597 Salvia bowleyana HOM05D006492 ORTHO05D008432 1.4e-28 132.5 451 27.3
CsaV3_3G011330 Cucumis sativus L. HOM05D006492 ORTHO05D008432 3.0e-28 131.3 433 26.3
ClCG05G003620 Citrullus lanatus HOM05D006492 ORTHO05D008432 2.5e-27 128.3 440 27.7
A10p03080 Brassica napus HOM05D006492 ORTHO05D008432 5.7e-27 127.1 435 28.5
MELO3C006341.2 Cucumis melo HOM05D006492 ORTHO05D008432 5.7e-27 127.1 433 26.1
vmacro22821 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 3.1e-25 121.3 445 24.9
Sed0001454 Sechium edule HOM05D006492 ORTHO05D008432 1.3e-18 99.4 427 23.9
Atru.chr4.1802 Acer truncatum HOM05D006492 ORTHO05D008432 3.5e-16 91.3 310 24.8
BraA10t42581Z Brassica rapa HOM05D006492 ORTHO05D008432 4.0e-12 77.8 251 25.9
HPP92_025559 Vanilla planifolia HOM05D006492 ORTHO05D008432 2.4e-09 68.6 333 20.7


User provided reference genes

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