Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0061s0021 Marchantia polymorpha HOM05D006594 ORTHO05D008383 1.1e-295 1019.2 518 100.0
SMO116G0206 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 4.9e-62 243.0 510 31.4
SEGI_30493 Sequoiadendron giganteum HOM05D006594 ORTHO05D008383 3.0e-51 207.2 546 30.2
Aqoxy7G00398 Aquilegia oxysepala HOM05D006594 ORTHO05D008383 3.1e-48 197.2 513 28.8
PSO782G0556 Papaver somniferum HOM05D006594 ORTHO05D008383 6.4e-46 189.5 542 26.2
ATR0757G038 Amborella trichopoda HOM05D006594 ORTHO05D008383 1.2e-44 185.3 607 26.9
CDE11G0822 Ceratophyllum demersum HOM05D006594 ORTHO05D008383 2.3e-43 181.0 515 26.8
Cfa008301 Carpinus fangiana HOM05D006594 ORTHO05D008383 3.0e-43 180.6 513 26.9
TAR374G1009 Trochodendron aralioides HOM05D006594 ORTHO05D008383 5.1e-43 179.9 421 30.2
CiPaw.03G104400 Carya illinoinensis HOM05D006594 ORTHO05D008383 2.5e-42 177.6 520 26.5
SGA_v2.0_scaffold113G31757 Striga asiatica HOM05D006594 ORTHO05D008383 1.3e-41 175.3 511 27.2
Oeu022583.1 Olea europaea HOM05D006594 ORTHO05D008383 2.1e-41 174.5 496 26.6
CSS0002088 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 3.7e-41 173.7 512 27.7
CSS0024482 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 1.8e-40 171.4 512 27.5
COL.COLO4_14285 Corchorus olitorius HOM05D006594 ORTHO05D008383 1.8e-40 171.4 512 26.4
Ciclev10004900m.g Citrus clementina HOM05D006594 ORTHO05D008383 4.0e-40 170.2 513 25.3
Lsat_1_v5_gn_0_29900 Lactuca sativa HOM05D006594 ORTHO05D008383 1.5e-39 168.3 510 27.5
Prupe.2G292200 Prunus persica HOM05D006594 ORTHO05D008383 2.0e-39 167.9 502 24.5
Duzib205G1849 Durio zibethinus HOM05D006594 ORTHO05D008383 3.4e-39 167.2 526 26.2
PSO478G3258 Papaver somniferum HOM05D006594 ORTHO05D008383 3.4e-39 167.2 484 25.8
Potri.015G140900 Populus trichocarpa HOM05D006594 ORTHO05D008383 1.0e-38 165.6 518 26.1
RcHm_v2.0_Chr1g0376971 Rosa chinensis HOM05D006594 ORTHO05D008383 1.3e-38 165.2 503 24.7
SalBow2G3298 Salvia bowleyana HOM05D006594 ORTHO05D008383 6.5e-38 162.9 508 27.0
Ca_10784_v3 Cicer arietinum L. HOM05D006594 ORTHO05D008383 1.1e-37 162.2 523 26.6
Migut.F01134 Erythranthe guttata HOM05D006594 ORTHO05D008383 1.9e-37 161.4 522 26.2
PGR142G0281 Punica granatum HOM05D006594 ORTHO05D008383 3.2e-37 160.6 521 26.1
Thhalv10013484m.g Eutrema salsugineum HOM05D006594 ORTHO05D008383 5.5e-37 159.8 520 26.7
Solyc03g026010.3 Solanum lycopersicum HOM05D006594 ORTHO05D008383 7.1e-37 159.5 508 27.0
FAN06G4553 Fragaria x ananassa HOM05D006594 ORTHO05D008383 9.3e-37 159.1 522 24.7
FAN10G1161 Fragaria x ananassa HOM05D006594 ORTHO05D008383 9.3e-37 159.1 522 24.7
MSTRG.8446 Avicennia marina HOM05D006594 ORTHO05D008383 1.2e-36 158.7 503 26.4
Sabra15G0151500 Salix brachista HOM05D006594 ORTHO05D008383 1.6e-36 158.3 524 25.6
FAN06G0009 Fragaria x ananassa HOM05D006594 ORTHO05D008383 3.5e-36 157.1 522 24.7
Manes.14G027600 Manihot esculenta HOM05D006594 ORTHO05D008383 3.5e-36 157.1 532 24.6
PGSC0003DMG400014324 Solanum tuberosum HOM05D006594 ORTHO05D008383 3.5e-36 157.1 521 26.3
Sopen03g004840 Solanum pennellii HOM05D006594 ORTHO05D008383 4.6e-36 156.8 508 26.6
Lalb_Chr06g0161051 Lupinus albus HOM05D006594 ORTHO05D008383 1.0e-35 155.6 512 26.6
Sc19g0001600 Simmondsia chinensis HOM05D006594 ORTHO05D008383 1.0e-35 155.6 528 25.4
THA.LOC104825095 Tarenaya hassleriana HOM05D006594 ORTHO05D008383 1.0e-35 155.6 537 26.3
FAN01G0792 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.3e-35 155.2 516 24.2
Glyma.10G237700 Glycine max HOM05D006594 ORTHO05D008383 1.3e-35 155.2 534 26.8
Eucgr.K00239 Eucalyptus grandis HOM05D006594 ORTHO05D008383 1.8e-35 154.8 456 27.6
TWI23G0502 Tripterygium wilfordii HOM05D006594 ORTHO05D008383 2.3e-35 154.5 519 25.4
LjContig00238g0014067 Lotus japonicus HOM05D006594 ORTHO05D008383 3.0e-35 154.1 508 26.8
MD07G1266600 Malus domestica HOM05D006594 ORTHO05D008383 3.9e-35 153.7 516 24.0
Peaxi162Scf00915g00007 Petunia axillaris HOM05D006594 ORTHO05D008383 3.9e-35 153.7 496 26.2
QL09p014600 Quercus lobata HOM05D006594 ORTHO05D008383 5.1e-35 153.3 519 24.5
vmacro06700 Vaccinium macrocarpon HOM05D006594 ORTHO05D008383 5.1e-35 153.3 475 27.2
HanXRQChr09g0253731 Helianthus annuus HOM05D006594 ORTHO05D008383 8.7e-35 152.5 508 25.8
BcaB08g35566 Brassica carinata HOM05D006594 ORTHO05D008383 1.5e-34 151.8 518 26.3
Phvul.007G067900 Phaseolus vulgaris HOM05D006594 ORTHO05D008383 1.5e-34 151.8 524 26.3
AT5G52180 Arabidopsis thaliana HOM05D006594 ORTHO05D008383 1.9e-34 151.4 520 26.2
Medtr1g100767 Medicago truncatula HOM05D006594 ORTHO05D008383 1.9e-34 151.4 511 26.4
Psat6g200680 Pisum sativum HOM05D006594 ORTHO05D008383 1.9e-34 151.4 525 26.5
CsaV3_3G016960 Cucumis sativus L. HOM05D006594 ORTHO05D008383 2.5e-34 151.0 510 24.7
AL8G26560 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 5.7e-34 149.8 518 25.9
BraA10t43068Z Brassica rapa HOM05D006594 ORTHO05D008383 5.7e-34 149.8 498 26.1
MBI12_g14429_MAGBIO Magnolia biondii HOM05D006594 ORTHO05D008383 5.7e-34 149.8 467 26.1
Glyma.20G156900 Glycine max HOM05D006594 ORTHO05D008383 7.4e-34 149.4 523 26.2
BcaC04g20605 Brassica carinata HOM05D006594 ORTHO05D008383 9.7e-34 149.1 517 26.1
C09p41600 Brassica napus HOM05D006594 ORTHO05D008383 9.7e-34 149.1 517 26.1
BolC9t57044H Brassica oleracea HOM05D006594 ORTHO05D008383 9.7e-34 149.1 517 26.1
A10p09870 Brassica napus HOM05D006594 ORTHO05D008383 1.3e-33 148.7 514 26.3
Sp6g14430 Schrenkiella parvula HOM05D006594 ORTHO05D008383 2.2e-33 147.9 519 25.4
Carub.0008s1227 Capsella rubella HOM05D006594 ORTHO05D008383 2.8e-33 147.5 516 25.8
MELO3C006892.2 Cucumis melo HOM05D006594 ORTHO05D008383 3.7e-33 147.1 512 24.2
Rhsim03G0179000 Rhododendron simsii HOM05D006594 ORTHO05D008383 4.8e-33 146.7 446 26.9
CARHR265100 Cardamine hirsuta HOM05D006594 ORTHO05D008383 1.1e-32 145.6 500 25.2
ClCG05G007930 Citrullus lanatus HOM05D006594 ORTHO05D008383 1.1e-32 145.6 527 24.3
CAN.G856.1 Capsicum annuum HOM05D006594 ORTHO05D008383 3.1e-32 144.1 527 25.4
GSVIVG01010594001 Vitis vinifera HOM05D006594 ORTHO05D008383 3.1e-32 144.1 493 24.9
Cc02_g03190 Coffea canephora HOM05D006594 ORTHO05D008383 4.1e-32 143.7 512 25.8
Gohir.D12G260500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 5.3e-32 143.3 528 23.9
Gorai.008G279100 Gossypium raimondii HOM05D006594 ORTHO05D008383 5.3e-32 143.3 529 23.6
Sed0005391 Sechium edule HOM05D006594 ORTHO05D008383 1.2e-31 142.1 478 24.9
Haze_13736 Corylus avellana HOM05D006594 ORTHO05D008383 4.5e-31 140.2 514 24.5
FAN03G3172 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.1e-29 135.6 492 24.0
Aa31LG3G8560 Aethionema arabicum HOM05D006594 ORTHO05D008383 5.5e-29 133.3 520 24.4
arahy.Tifrunner.gnm1.ann1.GIF0V2 Arachis hypogaea HOM05D006594 ORTHO05D008383 2.7e-28 131.0 450 26.9
DCAR_009355 Daucus carota HOM05D006594 ORTHO05D008383 4.6e-28 130.2 516 23.6
arahy.Tifrunner.gnm1.ann1.MGJ2V1 Arachis hypogaea HOM05D006594 ORTHO05D008383 7.9e-28 129.4 451 26.8
Actinidia32874 Actinidia chinensis HOM05D006594 ORTHO05D008383 1.8e-27 128.3 455 24.6
AUR62021215 Chenopodium quinoa HOM05D006594 ORTHO05D008383 5.1e-27 126.7 410 25.4
Hma1.2p1_1323F.1_g275590 Hydrangea macrophylla HOM05D006594 ORTHO05D008383 8.8e-27 125.9 277 29.2
Nitab4.5_0001508g0080 Nicotiana tabacum HOM05D006594 ORTHO05D008383 4.8e-25 120.2 271 29.9
Dinv28461 Davidia involucrata HOM05D006594 ORTHO05D008383 6.3e-25 119.8 443 24.8
TPR.G14337 Trifolium pratense HOM05D006594 ORTHO05D008383 1.4e-24 118.6 290 30.0
unitig_0.g463 Utricularia gibba HOM05D006594 ORTHO05D008383 1.4e-24 118.6 289 28.4
Manes.06G145800 Manihot esculenta HOM05D006594 ORTHO05D008383 2.4e-24 117.9 511 24.1
Lj1P995T25 Lonicera japonica HOM05D006594 ORTHO05D008383 2.6e-23 114.4 136 42.6
A06p20700 Brassica napus HOM05D006594 ORTHO05D008383 7.7e-23 112.8 267 28.1
Gohir.A08G100500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 3.2e-21 107.5 405 24.7
Ah.13g068460 Amaranthus hybridus HOM05D006594 ORTHO05D008383 3.6e-20 104.0 508 21.9
MCO13G538 Micromonas commoda HOM05D006594 ORTHO05D008383 2.0e-18 98.2 539 21.5
AUR62016008 Chenopodium quinoa HOM05D006594 ORTHO05D008383 4.1e-16 90.5 292 26.7
Gohir.A12G259700 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.2e-15 89.0 432 21.8
SMO195G0004 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 5.9e-15 86.7 121 37.2
Gorai.004G119800 Gossypium raimondii HOM05D006594 ORTHO05D008383 3.9e-11 73.9 110 34.5
Thecc.03G173100 Theobroma cacao HOM05D006594 ORTHO05D008383 6.7e-11 73.2 282 24.8
AL1G10170 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 8.8e-11 72.8 82 41.5
FvH4_7g29210 Fragaria vesca HOM05D006594 ORTHO05D008383 8.8e-11 72.8 319 21.9
Zm00001eb378500 Zea mays HOM05D006594 ORTHO05D008383 1.7e-09 68.6 129 32.6
Os06g0129000 Oryza sativa ssp. japonica HOM05D006594 ORTHO05D008383 3.7e-09 67.4 134 31.3
SMO195G0056 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 4.8e-09 67.0 158 25.9
Gohir.D08G112040 Gossypium hirsutum HOM05D006594 ORTHO05D008383 7.0e-08 63.2 118 32.2
arahy.Tifrunner.gnm1.ann1.A65ZGP Arachis hypogaea HOM05D006594 ORTHO05D008383 3.8e-06 57.4 121 33.1


User provided reference genes

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