Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0060s0114 Marchantia polymorpha HOM05D005252 ORTHO05D006788 6.7e-159 563.9 276 100.0
Pp3c1_22230 Physcomitrium patens HOM05D005252 ORTHO05D006788 1.8e-58 230.3 281 44.1
QL02p064187 Quercus lobata HOM05D005252 ORTHO05D006788 1.1e-44 184.5 255 42.0
AagrBONN_evm.TU.Sc2ySwM_344.1683 Anthoceros agrestis HOM05D005252 ORTHO05D006788 4.2e-44 182.6 175 51.4
PSO782G3987 Papaver somniferum HOM05D005252 ORTHO05D006788 5.5e-44 182.2 257 42.8
arahy.Tifrunner.gnm1.ann1.P1K6DT Arachis hypogaea HOM05D005252 ORTHO05D006788 2.1e-43 180.3 258 39.5
PSO063G5026 Papaver somniferum HOM05D005252 ORTHO05D006788 2.7e-43 179.9 257 42.0
VMungo0647G0073 Vigna mungo HOM05D005252 ORTHO05D006788 1.4e-42 177.6 248 41.1
LjContig00141g0010829 Lotus japonicus HOM05D005252 ORTHO05D006788 6.7e-42 175.3 258 40.3
arahy.Tifrunner.gnm1.ann1.Y82BEI Arachis hypogaea HOM05D005252 ORTHO05D006788 8.8e-42 174.9 258 38.4
Medtr5g076640 Medicago truncatula HOM05D005252 ORTHO05D006788 8.8e-42 174.9 248 39.9
MBI06_g19632_MAGBIO Magnolia biondii HOM05D005252 ORTHO05D006788 1.5e-41 174.1 257 39.7
TPR.G5289 Trifolium pratense HOM05D005252 ORTHO05D006788 2.0e-41 173.7 248 40.7
Glyma.14G209800 Glycine max HOM05D005252 ORTHO05D006788 9.7e-41 171.4 254 39.0
Phvul.008G241400 Phaseolus vulgaris HOM05D005252 ORTHO05D006788 1.7e-40 170.6 249 40.2
arahy.Tifrunner.gnm1.ann1.UX6KKC Arachis hypogaea HOM05D005252 ORTHO05D006788 2.2e-40 170.2 258 38.0
Atru.chr1.2124 Acer truncatum HOM05D005252 ORTHO05D006788 3.7e-40 169.5 262 38.5
ClCG05G011370 Citrullus lanatus HOM05D005252 ORTHO05D006788 4.8e-40 169.1 287 37.6
Actinidia28776 Actinidia chinensis HOM05D005252 ORTHO05D006788 1.4e-39 167.5 257 40.9
AagrBONN_evm.TU.Sc2ySwM_344.1689 Anthoceros agrestis HOM05D005252 ORTHO05D006788 1.8e-39 167.2 168 51.2
CsaV3_3G021090 Cucumis sativus L. HOM05D005252 ORTHO05D006788 1.8e-39 167.2 256 39.8
SEGI_32636 Sequoiadendron giganteum HOM05D005252 ORTHO05D006788 2.4e-39 166.8 271 38.4
Sed0007469 Sechium edule HOM05D005252 ORTHO05D006788 3.1e-39 166.4 260 40.8
SMO244G0074 Selaginella moellendorffii HOM05D005252 ORTHO05D006788 3.1e-39 166.4 249 38.6
Potri.004G081400 Populus trichocarpa HOM05D005252 ORTHO05D006788 4.1e-39 166.0 255 38.8
Haze_14323 Corylus avellana HOM05D005252 ORTHO05D006788 5.3e-39 165.6 255 39.6
FAN23G1936 Fragaria x ananassa HOM05D005252 ORTHO05D006788 5.3e-39 165.6 255 37.3
DCAR_003403 Daucus carota HOM05D005252 ORTHO05D006788 6.9e-39 165.2 257 38.9
CSS0014125 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 9.1e-39 164.9 251 39.0
Thecc.04G057900 Theobroma cacao HOM05D005252 ORTHO05D006788 9.1e-39 164.9 255 39.2
Lsat_1_v5_gn_2_71861 Lactuca sativa HOM05D005252 ORTHO05D006788 1.2e-38 164.5 258 38.4
FAN28G2815 Fragaria x ananassa HOM05D005252 ORTHO05D006788 1.5e-38 164.1 255 36.9
Psat2g042800 Pisum sativum HOM05D005252 ORTHO05D006788 2.0e-38 163.7 249 39.0
Hma1.2p1_0158F.1_g069575 Hydrangea macrophylla HOM05D005252 ORTHO05D006788 2.6e-38 163.3 252 40.1
Hma1.2p1_0158F.1_g069580 Hydrangea macrophylla HOM05D005252 ORTHO05D006788 2.6e-38 163.3 252 40.1
Ca_05755_v3 Cicer arietinum L. HOM05D005252 ORTHO05D006788 3.4e-38 162.9 248 37.9
FvH4_1g27420 Fragaria vesca HOM05D005252 ORTHO05D006788 4.5e-38 162.5 255 37.6
MD17G1287300 Malus domestica HOM05D005252 ORTHO05D006788 4.5e-38 162.5 259 39.0
CiPaw.04G049400 Carya illinoinensis HOM05D005252 ORTHO05D006788 7.7e-38 161.8 254 39.8
TWI74G0077 Tripterygium wilfordii HOM05D005252 ORTHO05D006788 7.7e-38 161.8 256 38.7
Prupe.3G014000 Prunus persica HOM05D005252 ORTHO05D006788 1.0e-37 161.4 263 38.8
RcHm_v2.0_Chr3g0488621 Rosa chinensis HOM05D005252 ORTHO05D006788 1.0e-37 161.4 254 39.4
COL.COLO4_20051 Corchorus olitorius HOM05D005252 ORTHO05D006788 1.7e-37 160.6 255 37.6
Cfa007750 Carpinus fangiana HOM05D005252 ORTHO05D006788 2.9e-37 159.8 255 39.6
AUR62037491 Chenopodium quinoa HOM05D005252 ORTHO05D006788 2.9e-37 159.8 270 38.5
Gohir.D12G051000 Gossypium hirsutum HOM05D005252 ORTHO05D006788 2.9e-37 159.8 255 39.2
Gorai.008G054300 Gossypium raimondii HOM05D005252 ORTHO05D006788 2.9e-37 159.8 255 39.2
Nn5g27060 Nelumbo nucifera HOM05D005252 ORTHO05D006788 2.9e-37 159.8 254 38.6
EL10Ac4g08917 Beta vulgaris HOM05D005252 ORTHO05D006788 3.8e-37 159.5 259 37.5
Cpa.g.sc178.38 Carica papaya HOM05D005252 ORTHO05D006788 5.0e-37 159.1 269 38.7
Glyma.02G240302 Glycine max HOM05D005252 ORTHO05D006788 6.5e-37 158.7 249 37.3
Cc07_g12720 Coffea canephora HOM05D005252 ORTHO05D006788 8.5e-37 158.3 245 39.2
Sc20g0000830 Simmondsia chinensis HOM05D005252 ORTHO05D006788 1.1e-36 157.9 274 39.1
CSS0009455 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 2.5e-36 156.8 251 38.2
Sp6g26990 Schrenkiella parvula HOM05D005252 ORTHO05D006788 2.5e-36 156.8 260 37.3
AUR62004761 Chenopodium quinoa HOM05D005252 ORTHO05D006788 3.2e-36 156.4 264 38.3
Duzib133G0566 Durio zibethinus HOM05D005252 ORTHO05D006788 7.2e-36 155.2 255 38.8
Ah.06g191550 Amaranthus hybridus HOM05D005252 ORTHO05D006788 9.4e-36 154.8 254 38.2
TAR622G0726 Trochodendron aralioides HOM05D005252 ORTHO05D006788 9.4e-36 154.8 248 38.3
BcaC03g18544 Brassica carinata HOM05D005252 ORTHO05D006788 2.1e-35 153.7 260 36.9
A02p04080 Brassica napus HOM05D005252 ORTHO05D006788 2.1e-35 153.7 260 37.3
Thhalv10015946m.g Eutrema salsugineum HOM05D005252 ORTHO05D006788 2.7e-35 153.3 260 37.3
AL6G28290 Arabidopsis lyrata HOM05D005252 ORTHO05D006788 3.6e-35 152.9 270 36.3
arahy.Tifrunner.gnm1.ann1.2Q625H Arachis hypogaea HOM05D005252 ORTHO05D006788 3.6e-35 152.9 205 41.5
C02p08920 Brassica napus HOM05D005252 ORTHO05D006788 3.6e-35 152.9 260 36.9
CANSAT56G0277 Cannabis sativa HOM05D005252 ORTHO05D006788 3.6e-35 152.9 260 36.2
Ciclev10011537m.g Citrus clementina HOM05D005252 ORTHO05D006788 3.6e-35 152.9 259 37.1
Gohir.A12G052400 Gossypium hirsutum HOM05D005252 ORTHO05D006788 3.6e-35 152.9 255 38.4
Lalb_Chr04g0251511 Lupinus albus HOM05D005252 ORTHO05D006788 3.6e-35 152.9 248 39.1
THA.LOC104820865 Tarenaya hassleriana HOM05D005252 ORTHO05D006788 3.6e-35 152.9 255 36.5
FAN28G2525 Fragaria x ananassa HOM05D005252 ORTHO05D006788 6.1e-35 152.1 240 37.1
SGA_v2.0_scaffold115G32046 Striga asiatica HOM05D005252 ORTHO05D006788 6.1e-35 152.1 257 37.4
Dinv19082 Davidia involucrata HOM05D000783 ORTHO05D000705 1.0e-34 151.4 253 39.1
AT5G17240 Arabidopsis thaliana HOM05D005252 ORTHO05D006788 1.4e-34 151.0 263 37.3
BraA02t05370Z Brassica rapa HOM05D005252 ORTHO05D006788 1.4e-34 151.0 261 37.9
BolC2t06801H Brassica oleracea HOM05D005252 ORTHO05D006788 1.8e-34 150.6 260 36.5
Sabra04G0054100 Salix brachista HOM05D005252 ORTHO05D006788 2.3e-34 150.2 253 36.8
Aqoxy3G04163 Aquilegia oxysepala HOM05D005252 ORTHO05D006788 3.9e-34 149.4 257 38.1
HanXRQChr14g0443361 Helianthus annuus HOM05D005252 ORTHO05D006788 3.9e-34 149.4 254 36.2
BcaNung00410 Brassica carinata HOM05D005252 ORTHO05D006788 5.1e-34 149.1 256 37.1
CARHR195970 Cardamine hirsuta HOM05D005252 ORTHO05D006788 8.8e-34 148.3 256 38.3
vmacro18507 Vaccinium macrocarpon HOM05D005252 ORTHO05D006788 1.1e-33 147.9 256 37.9
CBR_g38413 Chara braunii HOM05D005252 ORTHO05D006788 3.3e-33 146.4 167 48.5
Lj2C511T2 Lonicera japonica HOM05D005252 ORTHO05D006788 1.3e-32 144.4 252 35.7
SalBow5G4252 Salvia bowleyana HOM05D005252 ORTHO05D006788 4.8e-32 142.5 255 36.1
SalBow5G4267 Salvia bowleyana HOM05D005252 ORTHO05D006788 4.8e-32 142.5 255 36.1
GSVIVG01035253001 Vitis vinifera HOM05D005252 ORTHO05D006788 6.3e-32 142.1 257 34.6
Nitab4.5_0000483g0240 Nicotiana tabacum HOM05D005252 ORTHO05D006788 8.2e-32 141.7 254 33.1
Zm00001eb320090 Zea mays HOM05D005252 ORTHO05D006788 4.1e-31 139.4 259 36.3
Aa31LG11G12430 Aethionema arabicum HOM05D005252 ORTHO05D006788 7.0e-31 138.7 288 33.0
Eucgr.F02912 Eucalyptus grandis HOM05D005252 ORTHO05D006788 7.0e-31 138.7 240 39.6
Nitab4.5_0008137g0010 Nicotiana tabacum HOM05D005252 ORTHO05D006788 7.0e-31 138.7 258 32.6
CAN.G1681.16 Capsicum annuum HOM05D005252 ORTHO05D006788 1.2e-30 137.9 252 34.5
Oeu060821.2 Olea europaea HOM05D005252 ORTHO05D006788 2.0e-30 137.1 255 34.1
PGR004G2027 Punica granatum HOM05D005252 ORTHO05D006788 2.0e-30 137.1 267 34.1
Os07g0471100 Oryza sativa ssp. japonica HOM05D005252 ORTHO05D006788 3.5e-30 136.3 287 34.1
Migut.K00975 Erythranthe guttata HOM05D005252 ORTHO05D006788 4.5e-30 136.0 249 36.5
FAN19G2162 Fragaria x ananassa HOM05D005252 ORTHO05D006788 5.9e-30 135.6 170 43.5
PGSC0003DMG400016732 Solanum tuberosum HOM05D005252 ORTHO05D006788 2.9e-29 133.3 262 36.3
Sopen02g025950 Solanum pennellii HOM05D005252 ORTHO05D006788 3.8e-29 132.9 261 36.8
Peaxi162Scf00713g00214 Petunia axillaris HOM05D005252 ORTHO05D006788 6.5e-29 132.1 249 32.5
CSS0013830 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 1.1e-28 131.3 251 34.7
HPP92_025609 Vanilla planifolia HOM05D005252 ORTHO05D006788 1.4e-28 131.0 235 35.3
Solyc02g081320.4 Solanum lycopersicum HOM05D005252 ORTHO05D006788 1.9e-28 130.6 261 36.8
CDE04G0719 Ceratophyllum demersum HOM05D005252 ORTHO05D006788 2.5e-28 130.2 244 34.8
ECA238G3559 Erigeron canadensis HOM05D005252 ORTHO05D006788 5.5e-28 129.0 235 37.4
Hund22213 Selenicereus undatus HOM05D005252 ORTHO05D006788 1.6e-27 127.5 313 30.0
Rhsim08G0021900 Rhododendron simsii HOM05D005252 ORTHO05D006788 2.1e-27 127.1 153 45.1
ATR0807G103 Amborella trichopoda HOM05D005252 ORTHO05D006788 2.2e-24 117.1 228 33.3
Manes.01G124000 Manihot esculenta HOM05D005252 ORTHO05D006788 2.4e-23 113.6 239 35.1
Nitab4.5_0011448g0010 Nicotiana tabacum HOM05D005252 ORTHO05D006788 1.0e-21 108.2 263 30.4
unitig_748.g8447 Utricularia gibba HOM05D001485 ORTHO05D001384 1.7e-21 107.5 194 36.1
SHI24494 Sapria himalayana HOM05D005252 ORTHO05D006788 8.5e-21 105.1 224 32.6
Psat6g212680 Pisum sativum HOM05D005252 ORTHO05D006788 1.5e-17 94.4 113 46.0
Cre10.g437829 Chlamydomonas reinhardtii HOM05D005252 ORTHO05D006788 5.7e-17 92.4 279 29.7
Carub.0006s1543 Capsella rubella HOM05D005252 ORTHO05D006788 3.7e-16 89.7 64 65.6
MCO06G238 Micromonas commoda HOM05D005252 ORTHO05D006788 3.5e-06 56.6 61 47.5


User provided reference genes

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