Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0060s0103 Marchantia polymorpha HOM05D005433 ORTHO05D006675 3.0e-163 578.6 318 100.0
Pp3c11_19700 Physcomitrium patens HOM05D005433 ORTHO05D006675 7.0e-51 205.3 200 63.0
AagrBONN_evm.TU.Sc2ySwM_368.1222 Anthoceros agrestis HOM05D005433 ORTHO05D006675 2.0e-45 187.2 182 61.0
CDE10G1174 Ceratophyllum demersum HOM05D005433 ORTHO05D006675 4.8e-36 156.0 217 49.8
CiPaw.12G116900 Carya illinoinensis HOM05D005433 ORTHO05D006675 1.8e-35 154.1 226 47.3
Sabra11G0091300 Salix brachista HOM05D005433 ORTHO05D006675 5.4e-35 152.5 217 48.8
Cfa020622 Carpinus fangiana HOM05D005433 ORTHO05D006675 1.2e-34 151.4 227 45.4
THA.LOC104810456 Tarenaya hassleriana HOM05D005433 ORTHO05D006675 1.6e-34 151.0 223 47.5
VMungo0331G0725 Vigna mungo HOM05D005433 ORTHO05D006675 3.5e-34 149.8 227 47.6
Nitab4.5_0001208g0170 Nicotiana tabacum HOM05D005433 ORTHO05D006675 4.5e-34 149.4 216 47.2
PGR083G2284 Punica granatum HOM05D005433 ORTHO05D006675 5.9e-34 149.1 200 49.5
arahy.Tifrunner.gnm1.ann1.H96BGA Arachis hypogaea HOM05D005433 ORTHO05D006675 7.7e-34 148.7 220 46.8
GSVIVG01014263001 Vitis vinifera HOM05D005433 ORTHO05D006675 7.7e-34 148.7 172 54.7
arahy.Tifrunner.gnm1.ann1.7LX6SY Arachis hypogaea HOM05D005433 ORTHO05D006675 1.0e-33 148.3 216 46.8
TWI38G0185 Tripterygium wilfordii HOM05D005433 ORTHO05D006675 1.3e-33 147.9 215 48.4
Hma1.2p1_0416F.1_g148475 Hydrangea macrophylla HOM05D005433 ORTHO05D006675 1.7e-33 147.5 220 47.7
MBI07_g32542_MAGBIO Magnolia biondii HOM05D005433 ORTHO05D006675 2.3e-33 147.1 170 54.1
Thecc.07G099400 Theobroma cacao HOM05D005433 ORTHO05D006675 2.3e-33 147.1 204 50.0
CsaV3_3G019570 Cucumis sativus L. HOM05D005433 ORTHO05D006675 2.9e-33 146.7 222 46.8
Nn1g06380 Nelumbo nucifera HOM05D005433 ORTHO05D006675 2.9e-33 146.7 202 51.0
Migut.M00771 Erythranthe guttata HOM05D005433 ORTHO05D006675 3.8e-33 146.4 212 48.6
Haze_09383 Corylus avellana HOM05D005433 ORTHO05D006675 5.0e-33 146.0 225 44.4
ATR0602G229 Amborella trichopoda HOM05D005433 ORTHO05D006675 8.6e-33 145.2 212 48.6
Solyc10g007120.4 Solanum lycopersicum HOM05D005433 ORTHO05D006675 1.1e-32 144.8 211 46.9
Sopen10g003020 Solanum pennellii HOM05D005433 ORTHO05D006675 1.1e-32 144.8 211 46.9
TAR624G0745 Trochodendron aralioides HOM05D005433 ORTHO05D006675 1.1e-32 144.8 220 47.3
ClCG05G009210 Citrullus lanatus HOM05D005433 ORTHO05D006675 1.5e-32 144.4 222 46.4
Nitab4.5_0005232g0030 Nicotiana tabacum HOM05D005433 ORTHO05D006675 1.5e-32 144.4 217 46.1
Potri.011G097800 Populus trichocarpa HOM05D005433 ORTHO05D006675 1.5e-32 144.4 231 46.3
CAN.G1119.17 Capsicum annuum HOM05D005433 ORTHO05D006675 1.9e-32 144.1 201 48.8
QL08p023594 Quercus lobata HOM05D005433 ORTHO05D006675 1.9e-32 144.1 212 47.6
Sc16g0007310 Simmondsia chinensis HOM05D005433 ORTHO05D006675 1.9e-32 144.1 211 48.8
CBR_g28819 Chara braunii HOM05D005433 ORTHO05D006675 2.5e-32 143.7 217 47.9
Rhsim04G0023000 Rhododendron simsii HOM05D005433 ORTHO05D006675 3.3e-32 143.3 220 47.3
Actinidia35236 Actinidia chinensis HOM05D005433 ORTHO05D006675 4.2e-32 142.9 207 48.8
Thhalv10021284m.g Eutrema salsugineum HOM05D005433 ORTHO05D006675 4.2e-32 142.9 225 45.8
Lsat_1_v5_gn_5_127421 Lactuca sativa HOM05D005433 ORTHO05D006675 4.2e-32 142.9 216 44.9
SGA_v2.0_scaffold73G24224 Striga asiatica HOM05D005433 ORTHO05D006675 4.2e-32 142.9 202 50.5
Phvul.010G112200 Phaseolus vulgaris HOM05D005433 ORTHO05D006675 5.5e-32 142.5 234 44.0
Peaxi162Scf00027g01311 Petunia axillaris HOM05D005433 ORTHO05D006675 7.2e-32 142.1 211 46.4
PGSC0003DMG400021311 Solanum tuberosum HOM05D005433 ORTHO05D006675 7.2e-32 142.1 207 46.9
unitig_85.g27411 Utricularia gibba HOM05D005433 ORTHO05D006675 1.2e-31 141.4 206 48.5
unitig_86.g29837 Utricularia gibba HOM05D005433 ORTHO05D006675 1.2e-31 141.4 206 48.5
MSTRG.15245 Avicennia marina HOM05D005433 ORTHO05D006675 1.6e-31 141.0 174 51.7
Duzib213G0446 Durio zibethinus HOM05D005433 ORTHO05D006675 1.6e-31 141.0 210 46.7
DCAR_019573 Daucus carota HOM05D005433 ORTHO05D006675 3.6e-31 139.8 207 46.4
Eucgr.F01178 Eucalyptus grandis HOM05D005433 ORTHO05D006675 3.6e-31 139.8 204 47.1
SalBow8G0584 Salvia bowleyana HOM05D005433 ORTHO05D006675 3.6e-31 139.8 240 45.0
SMO143G0248 Selaginella moellendorffii HOM05D009232 ORTHO05D006675 3.6e-31 139.8 201 49.3
Cc05_g11610 Coffea canephora HOM05D005433 ORTHO05D006675 4.7e-31 139.4 201 46.8
CSS0020446 Camellia sinensis var. sinensis HOM05D005433 ORTHO05D006675 6.1e-31 139.0 223 47.1
Manes.03G104600 Manihot esculenta HOM05D005433 ORTHO05D006675 6.1e-31 139.0 168 52.4
Ciclev10009151m.g Citrus clementina HOM05D005433 ORTHO05D006675 8.0e-31 138.7 204 48.0
Lj3g0015051 Lotus japonicus HOM05D005433 ORTHO05D006675 8.0e-31 138.7 208 47.1
C05p52110 Brassica napus HOM05D005433 ORTHO05D006675 1.0e-30 138.3 224 44.2
BolC5t33896H Brassica oleracea HOM05D005433 ORTHO05D006675 1.0e-30 138.3 224 44.2
Medtr2g078540 Medicago truncatula HOM05D005433 ORTHO05D006675 1.0e-30 138.3 169 53.3
BcaB06g29536 Brassica carinata HOM05D005433 ORTHO05D006675 1.4e-30 137.9 224 44.2
AT3G15110 Arabidopsis thaliana HOM05D005433 ORTHO05D006675 1.8e-30 137.5 223 44.4
Glyma.12G227200 Glycine max HOM05D005433 ORTHO05D006675 2.3e-30 137.1 198 46.5
MD03G1235600 Malus domestica HOM05D005433 ORTHO05D006675 2.3e-30 137.1 200 48.0
PSO675G6755 Papaver somniferum HOM05D005433 ORTHO05D006675 2.3e-30 137.1 204 48.5
A05p34330 Brassica napus HOM05D005433 ORTHO05D006675 3.0e-30 136.7 224 43.8
FvH4_3g19170 Fragaria vesca HOM05D005433 ORTHO05D006675 3.0e-30 136.7 214 43.9
BraA05t22254Z Brassica rapa HOM05D005433 ORTHO05D006675 4.0e-30 136.3 217 44.2
FAN25G0011 Fragaria x ananassa HOM05D005433 ORTHO05D006675 4.0e-30 136.3 214 44.4
Lalb_Chr25g0286191 Lupinus albus HOM05D005433 ORTHO05D006675 4.0e-30 136.3 197 46.7
Gohir.A01G060400 Gossypium hirsutum HOM05D005433 ORTHO05D006675 6.8e-30 135.6 209 45.5
Os02g0307800 Oryza sativa ssp. japonica HOM05D005433 ORTHO05D006675 6.8e-30 135.6 208 45.7
Gohir.D01G046900 Gossypium hirsutum HOM05D005433 ORTHO05D006675 8.9e-30 135.2 209 45.5
Gorai.002G066400 Gossypium raimondii HOM05D005433 ORTHO05D006675 8.9e-30 135.2 209 45.5
AL3G27460 Arabidopsis lyrata HOM05D005433 ORTHO05D006675 1.5e-29 134.4 222 45.0
CANSAT35G1219 Cannabis sativa HOM05D005433 ORTHO05D006675 1.5e-29 134.4 198 47.0
Carub.0003s1475 Capsella rubella HOM05D005433 ORTHO05D006675 1.5e-29 134.4 223 43.0
Aa31LG8G2320 Aethionema arabicum HOM05D005433 ORTHO05D006675 2.0e-29 134.0 211 46.0
FAN16G0161 Fragaria x ananassa HOM05D005433 ORTHO05D006675 2.6e-29 133.7 214 43.5
PSO541G1927 Papaver somniferum HOM05D005433 ORTHO05D006675 2.6e-29 133.7 204 48.0
RcHm_v2.0_Chr5g0032261 Rosa chinensis HOM05D005433 ORTHO05D006675 2.6e-29 133.7 214 45.8
FAN11G1719 Fragaria x ananassa HOM05D005433 ORTHO05D006675 3.4e-29 133.3 214 43.5
Glyma.06G235100 Glycine max HOM05D005433 ORTHO05D006675 3.4e-29 133.3 163 52.1
AUR62036145 Chenopodium quinoa HOM05D005433 ORTHO05D006675 4.4e-29 132.9 216 45.4
Sp3g13310 Schrenkiella parvula HOM05D005433 ORTHO05D006675 4.4e-29 132.9 214 45.3
ECA234G3266 Erigeron canadensis HOM05D005433 ORTHO05D006675 9.8e-29 131.7 197 48.2
HanXRQChr10g0302491 Helianthus annuus HOM05D005433 ORTHO05D006675 2.2e-28 130.6 211 47.9
Cpa.g.sc80.11 Carica papaya HOM05D005433 ORTHO05D006675 2.8e-28 130.2 212 43.9
Psat5g241440 Pisum sativum HOM05D005433 ORTHO05D006675 2.8e-28 130.2 202 46.5
Aqoxy4G00583 Aquilegia oxysepala HOM05D005433 ORTHO05D006675 3.7e-28 129.8 221 45.7
Ca_03534_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 1.1e-27 128.3 218 45.0
Ca_30930_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 1.1e-27 128.3 218 45.0
TPR.G17538 Trifolium pratense HOM05D005433 ORTHO05D006675 1.1e-27 128.3 205 47.3
vmacro09517 Vaccinium macrocarpon HOM05D005433 ORTHO05D006675 1.1e-27 128.3 251 40.6
EL10Ac4g08262 Beta vulgaris HOM05D005433 ORTHO05D006675 1.4e-27 127.9 215 43.3
Gorai.007G325500 Gossypium raimondii HOM05D005433 ORTHO05D006675 1.2e-26 124.8 170 48.8
Zm00001eb235270 Zea mays HOM05D005433 ORTHO05D006675 1.2e-26 124.8 220 41.8
Migut.H01964 Erythranthe guttata HOM05D005433 ORTHO05D006675 5.9e-26 122.5 204 44.6
Lj2g0011732 Lotus japonicus HOM05D005433 ORTHO05D006675 7.8e-26 122.1 178 44.9
Gohir.A11G286600 Gossypium hirsutum HOM05D005433 ORTHO05D006675 1.7e-25 120.9 170 47.6
Gohir.D11G306500 Gossypium hirsutum HOM05D005433 ORTHO05D006675 2.9e-25 120.2 204 43.1
FAN21G1059 Fragaria x ananassa HOM05D005433 ORTHO05D006675 6.6e-25 119.0 216 41.7
Dinv14949 Davidia involucrata HOM05D005433 ORTHO05D006675 5.6e-24 115.9 154 49.4
Medtr6g042030 Medicago truncatula HOM05D005433 ORTHO05D006675 1.2e-23 114.8 196 39.8
Psat1g075280 Pisum sativum HOM05D005433 ORTHO05D006675 2.1e-23 114.0 195 41.5
MSTRG.12890 Avicennia marina HOM05D005433 ORTHO05D006675 3.6e-23 113.2 204 42.2
Atru.chr2.2384 Acer truncatum HOM05D005433 ORTHO05D006675 4.7e-23 112.8 187 45.5
TPR.G19712 Trifolium pratense HOM05D005433 ORTHO05D006675 6.1e-23 112.5 149 46.3
Prupe.4G173400 Prunus persica HOM05D005433 ORTHO05D006675 3.4e-21 106.7 138 52.2
arahy.Tifrunner.gnm1.ann1.8TDA44 Arachis hypogaea HOM05D005433 ORTHO05D006675 1.4e-19 101.3 153 42.5
Sed0015039 Sechium edule HOM05D005433 ORTHO05D006675 3.5e-18 96.7 158 43.0
HPP92_027387 Vanilla planifolia HOM05D005433 ORTHO05D006675 4.6e-18 96.3 133 48.1
arahy.Tifrunner.gnm1.ann1.2X8QJZ Arachis hypogaea HOM05D005433 ORTHO05D006675 1.0e-17 95.1 189 36.5
MD11G1256600 Malus domestica HOM05D005433 ORTHO05D006675 1.3e-17 94.7 131 49.6
Lj8A153T41 Lonicera japonica HOM05D005433 ORTHO05D006675 2.3e-17 94.0 133 49.6
SGA_v2.0_scaffold70G23696 Striga asiatica HOM05D005433 ORTHO05D006675 5.0e-17 92.8 110 49.1
Thecc.07G099700 Theobroma cacao HOM05D005433 ORTHO05D006675 2.8e-15 87.0 123 45.5
AUR62019491 Chenopodium quinoa HOM05D005433 ORTHO05D006675 5.2e-14 82.8 206 39.8
Lsat_1_v5_gn_7_42380 Lactuca sativa HOM05D005433 ORTHO05D006675 1.4e-11 74.7 131 42.7
C09p61630 Brassica napus HOM05D005433 ORTHO05D006675 2.4e-11 73.9 150 39.3
BolC9t59001H Brassica oleracea HOM05D005433 ORTHO05D006675 2.4e-11 73.9 150 39.3
C02p31450 Brassica napus HOM05D005433 ORTHO05D006675 7.0e-11 72.4 126 40.5
Lalb_Chr03g0030801 Lupinus albus HOM05D005433 ORTHO05D006675 7.0e-11 72.4 117 41.0
Cre03.g167400 Chlamydomonas reinhardtii HOM05D005433 ORTHO05D006675 1.7e-09 67.8 173 35.3
MCO01G315 Micromonas commoda HOM05D005433 ORTHO05D006675 5.1e-09 66.2 184 30.4
Glyma.13G273100 Glycine max HOM05D005433 ORTHO05D006675 3.6e-07 60.1 111 41.4


User provided reference genes

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