Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0060s0028 Marchantia polymorpha HOM05D005971 ORTHO05D007459 0.0e+00 1974.9 999 100.0
Pp3c6_21780 Physcomitrium patens HOM05D005971 ORTHO05D007459 1.2e-149 535.0 1019 35.7
TAR626G0017 Trochodendron aralioides HOM05D005971 ORTHO05D007459 3.1e-97 360.9 995 28.7
TWI39G0032 Tripterygium wilfordii HOM05D005971 ORTHO05D007459 1.0e-92 345.9 989 28.9
Potri.001G457550 Populus trichocarpa HOM05D005971 ORTHO05D007459 1.4e-92 345.5 991 28.7
Lj1C905G3 Lonicera japonica HOM05D005971 ORTHO05D007459 1.8e-92 345.1 992 27.3
ATR0165G004 Amborella trichopoda HOM05D005971 ORTHO05D007459 2.3e-92 344.7 1007 28.0
Aqoxy2G04113 Aquilegia oxysepala HOM05D005971 ORTHO05D007459 2.3e-92 344.7 991 28.4
Migut.M01561 Erythranthe guttata HOM05D005971 ORTHO05D007459 5.2e-92 343.6 998 27.6
PSO675G3107 Papaver somniferum HOM05D005971 ORTHO05D007459 5.2e-92 343.6 991 26.4
Cfa019419 Carpinus fangiana HOM05D005971 ORTHO05D007459 1.5e-91 342.0 999 28.9
PSO017G5934 Papaver somniferum HOM05D005971 ORTHO05D007459 1.5e-91 342.0 994 26.5
Dinv19623 Davidia involucrata HOM05D005971 ORTHO05D007459 9.7e-91 339.3 990 28.0
QL04p073974 Quercus lobata HOM05D005971 ORTHO05D007459 6.5e-87 326.6 991 27.6
Sabra16G0310100 Salix brachista HOM05D005971 ORTHO05D007459 8.5e-87 326.2 1005 27.9
Atru.chr12.2184 Acer truncatum HOM05D005971 ORTHO05D007459 6.7e-84 316.6 992 27.7
Gorai.013G178300 Gossypium raimondii HOM05D005971 ORTHO05D007459 6.7e-84 316.6 1004 27.8
Glyma.15G255000 Glycine max HOM05D005971 ORTHO05D007459 8.8e-84 316.2 1009 27.0
MBI02_g40085_MAGBIO Magnolia biondii HOM05D005971 ORTHO05D007459 8.8e-84 316.2 899 27.7
RcHm_v2.0_Chr5g0026671 Rosa chinensis HOM05D005971 ORTHO05D007459 3.3e-83 314.3 990 27.6
Ciclev10018677m.g Citrus clementina HOM05D005971 ORTHO05D007459 9.7e-83 312.8 984 28.6
FAN16G0465 Fragaria x ananassa HOM05D005971 ORTHO05D007459 1.7e-82 312.0 987 27.3
Actinidia35435 Actinidia chinensis HOM05D005971 ORTHO05D007459 8.2e-82 309.7 999 26.9
Lalb_Chr25g0285011 Lupinus albus HOM05D005971 ORTHO05D007459 1.8e-81 308.5 1000 26.3
FvH4_3g15860 Fragaria vesca HOM05D005971 ORTHO05D007459 3.1e-81 307.8 988 26.9
Aa31LG1G20480 Aethionema arabicum HOM05D005971 ORTHO05D007459 1.6e-80 305.4 1005 27.9
CANSAT80G2256 Cannabis sativa HOM05D005971 ORTHO05D007459 3.5e-80 304.3 989 26.5
Duzib268G0338 Durio zibethinus HOM05D005971 ORTHO05D007459 4.5e-80 303.9 992 26.3
FAN11G3334 Fragaria x ananassa HOM05D005971 ORTHO05D007459 4.5e-80 303.9 988 26.7
Ca_03684_v3 Cicer arietinum L. HOM05D005971 ORTHO05D007459 2.9e-79 301.2 1001 26.8
Cc05_g16010 Coffea canephora HOM05D005971 ORTHO05D007459 1.1e-78 299.3 1005 26.5
SGA_v2.0_scaffold7G03577 Striga asiatica HOM05D005971 ORTHO05D007459 1.2e-77 295.8 988 26.7
THA.LOC104822751 Tarenaya hassleriana HOM05D005971 ORTHO05D007459 1.2e-77 295.8 997 26.0
MD05G1219300 Malus domestica HOM05D005971 ORTHO05D007459 2.1e-77 295.0 998 26.1
ClCG11G016380 Citrullus lanatus HOM05D005971 ORTHO05D007459 4.7e-77 293.9 996 26.0
Phvul.005G056400 Phaseolus vulgaris HOM05D005971 ORTHO05D007459 4.7e-77 293.9 1000 26.1
EL10Ac2g03354 Beta vulgaris HOM05D005971 ORTHO05D007459 6.1e-77 293.5 991 26.3
TPR.G9756 Trifolium pratense HOM05D005971 ORTHO05D007459 1.0e-76 292.7 1009 26.0
GSVIVG01020430001 Vitis vinifera HOM05D005971 ORTHO05D007459 1.0e-76 292.7 985 26.0
Ah.06g185720 Amaranthus hybridus HOM05D005971 ORTHO05D007459 2.3e-76 291.6 994 26.2
Manes.14G015836 Manihot esculenta HOM05D005971 ORTHO05D007459 2.3e-76 291.6 875 26.2
Psat1g011400 Pisum sativum HOM05D005971 ORTHO05D007459 2.3e-76 291.6 1006 25.0
AT1G04390 Arabidopsis thaliana HOM05D005971 ORTHO05D007459 5.2e-76 290.4 999 26.5
Nitab4.5_0000611g0060 Nicotiana tabacum HOM05D005971 ORTHO05D007459 5.2e-76 290.4 1010 26.7
Peaxi162Scf00267g01016 Petunia axillaris HOM05D005971 ORTHO05D007459 1.2e-75 289.3 990 27.2
Sopen10g001570 Solanum pennellii HOM05D005971 ORTHO05D007459 2.0e-75 288.5 993 26.3
Medtr2g069560 Medicago truncatula HOM05D005971 ORTHO05D007459 4.4e-75 287.3 1019 25.4
Atru.chr12.2179 Acer truncatum HOM05D005971 ORTHO05D007459 1.3e-74 285.8 797 28.2
Lj3g0007743 Lotus japonicus HOM05D005971 ORTHO05D007459 1.3e-74 285.8 1009 25.8
AL1G14000 Arabidopsis lyrata HOM05D005971 ORTHO05D007459 1.7e-74 285.4 1000 26.8
arahy.Tifrunner.gnm1.ann1.MUD8D6 Arachis hypogaea HOM05D005971 ORTHO05D007459 1.1e-73 282.7 1014 25.0
Sed0013026 Sechium edule HOM05D005971 ORTHO05D007459 2.4e-73 281.6 970 26.0
Carub.0001s0356 Capsella rubella HOM05D005971 ORTHO05D007459 7.0e-73 280.0 1007 25.9
Oeu052011.1 Olea europaea HOM05D005971 ORTHO05D007459 4.5e-72 277.3 976 26.7
PGR031G0315 Punica granatum HOM05D005971 ORTHO05D007459 2.2e-71 275.0 1002 26.1
CsaV3_4G031820 Cucumis sativus L. HOM05D005971 ORTHO05D007459 3.8e-71 274.2 998 25.7
CAN.G492.69 Capsicum annuum HOM05D005971 ORTHO05D007459 6.5e-71 273.5 997 25.9
BolC5t29039H Brassica oleracea HOM05D005971 ORTHO05D007459 2.5e-70 271.6 1005 27.0
Sc06g0001560 Simmondsia chinensis HOM05D005971 ORTHO05D007459 3.2e-70 271.2 761 27.6
C05p02580 Brassica napus HOM05D005971 ORTHO05D007459 9.5e-70 269.6 997 27.0
Lsat_1_v5_gn_7_71401 Lactuca sativa HOM05D005971 ORTHO05D007459 9.5e-70 269.6 1003 26.3
HanXRQChr05g0160991 Helianthus annuus HOM05D005971 ORTHO05D007459 3.6e-69 267.7 1010 26.0
DCAR_009638 Daucus carota HOM05D005971 ORTHO05D007459 4.7e-69 267.3 989 26.4
CSS0033662 Camellia sinensis var. sinensis HOM05D005971 ORTHO05D007459 6.1e-69 266.9 566 29.5
ECA240G1928 Erigeron canadensis HOM05D005971 ORTHO05D007459 5.7e-67 260.4 997 25.5
SalBow8G3201 Salvia bowleyana HOM05D005971 ORTHO05D007459 5.7e-67 260.4 1020 25.8
vmacro09786 Vaccinium macrocarpon HOM05D005971 ORTHO05D007459 2.8e-66 258.1 994 25.4
A10p02830 Brassica napus HOM05D005971 ORTHO05D007459 6.3e-66 256.9 992 25.8
Eucgr.F03182 Eucalyptus grandis HOM05D005971 ORTHO05D007459 2.4e-65 255.0 804 27.5
Hund12466 Selenicereus undatus HOM05D005971 ORTHO05D007459 8.6e-63 246.5 862 25.1
CSS0049989 Camellia sinensis var. sinensis HOM05D005971 ORTHO05D007459 1.1e-62 246.1 566 28.4
Nitab4.5_0004488g0030 Nicotiana tabacum HOM05D005971 ORTHO05D007459 1.5e-62 245.7 1031 25.7
Rhsim04G0005800 Rhododendron simsii HOM05D005971 ORTHO05D007459 1.9e-62 245.4 1112 24.2
Prupe.4G140600 Prunus persica HOM05D005971 ORTHO05D007459 1.2e-61 242.7 881 26.0
Sp1g03210 Schrenkiella parvula HOM05D005971 ORTHO05D007459 6.8e-60 236.9 731 28.3
Nn7g37820 Nelumbo nucifera HOM05D005971 ORTHO05D007459 8.9e-60 236.5 791 26.8
AUR62038398 Chenopodium quinoa HOM05D005971 ORTHO05D007459 2.9e-58 231.5 990 23.8
CARHR003720 Cardamine hirsuta HOM05D005971 ORTHO05D007459 1.1e-57 229.6 760 27.1
Gohir.D13G157500 Gossypium hirsutum HOM05D005971 ORTHO05D007459 2.0e-56 225.3 572 29.0
Solyc10g005600.4 Solanum lycopersicum HOM05D005971 ORTHO05D007459 2.3e-55 221.9 993 24.8
Zm00001eb273960 Zea mays HOM05D005971 ORTHO05D007459 5.6e-54 217.2 859 26.4
PGSC0003DMG402011239 Solanum tuberosum HOM05D005971 ORTHO05D007459 7.3e-54 216.9 575 28.7
BraA10t42550Z Brassica rapa HOM05D005971 ORTHO05D007459 2.1e-53 215.3 989 23.8
Gohir.A13G153066 Gossypium hirsutum HOM05D005971 ORTHO05D007459 2.8e-53 214.9 448 32.1
Thecc.07G154200 Theobroma cacao HOM05D005971 ORTHO05D007459 3.6e-53 214.5 802 26.9
VMungo1080G0173 Vigna mungo HOM05D005971 ORTHO05D007459 2.2e-50 205.3 814 24.8
Thhalv10006788m.g Eutrema salsugineum HOM05D005971 ORTHO05D007459 4.1e-49 201.1 455 30.1
Hma1.2p1_0637F.1_g193590 Hydrangea macrophylla HOM05D005971 ORTHO05D007459 1.5e-43 182.6 720 25.0
CDE12G0091 Ceratophyllum demersum HOM05D005971 ORTHO05D007459 2.0e-43 182.2 812 24.5
GSVIVG01020427001 Vitis vinifera HOM05D005971 ORTHO05D007459 2.4e-41 175.3 359 31.5
MELO3C010564.2 Cucumis melo HOM05D005971 ORTHO05D007459 2.1e-40 172.2 996 22.3
Cpa.g.sc10.37 Carica papaya HOM05D005971 ORTHO05D007459 2.2e-34 152.1 435 29.2
HPP92_026348 Vanilla planifolia HOM05D005971 ORTHO05D007459 2.9e-34 151.8 327 30.0
Nn7g37821 Nelumbo nucifera HOM05D005971 ORTHO05D007459 4.6e-24 117.9 194 33.5
HPP92_026349 Vanilla planifolia HOM05D005971 ORTHO05D007459 8.1e-21 107.1 474 27.0
FAN21G1476 Fragaria x ananassa HOM05D005971 ORTHO05D007459 1.4e-20 106.3 192 31.2
Cpa.g.sc10.38 Carica papaya HOM05D005971 ORTHO05D007459 3.1e-20 105.1 193 30.1
Peaxi162Scf01123g00003 Petunia axillaris HOM05D005971 ORTHO05D007459 4.5e-19 101.3 249 29.3
Os06g0674800 Oryza sativa ssp. japonica HOM05D005971 ORTHO05D007459 1.4e-17 96.3 357 24.9
unitig_26.g10082 Utricularia gibba HOM05D005971 ORTHO05D007459 1.2e-16 93.2 168 32.1
GSVIVG01020425001 Vitis vinifera HOM05D005971 ORTHO05D007459 1.3e-15 89.7 141 31.9
Zm00001eb395680 Zea mays HOM05D005971 ORTHO05D007459 3.0e-15 88.6 253 29.6
Haze_08564 Corylus avellana HOM05D005971 ORTHO05D000006 2.1e-13 82.4 139 34.5
VMungo1080G1570 Vigna mungo HOM05D005971 ORTHO05D007459 2.6e-11 75.5 136 30.9
arahy.Tifrunner.gnm1.ann1.Q40ZT9 Arachis hypogaea HOM05D005971 ORTHO05D007459 2.9e-10 72.0 142 28.9
FAN25G3291 Fragaria x ananassa HOM05D005971 ORTHO05D007459 3.5e-08 65.1 297 23.2
CBR_g36330 Chara braunii HOM05D000019 ORTHO05D000048 5.1e-07 61.2 175 29.7
Peaxi162Scf00095g00013 Petunia axillaris HOM05D005971 ORTHO05D007459 1.5e-06 59.7 221 27.1


User provided reference genes

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