Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0060s0023 Marchantia polymorpha HOM05D010424 ORTHO05D252528 0.0e+00 1186.8 590 100.0
Mapoly0001s0050 Marchantia polymorpha HOM05D010424 ORTHO05D254136 2.2e-42 177.9 460 28.5
Mapoly0060s0104 Marchantia polymorpha HOM05D010424 ORTHO05D252769 9.7e-22 109.4 428 23.8
Mapoly0084s0072 Marchantia polymorpha HOM05D010424 ORTHO05D256651 2.6e-19 101.3 472 22.9
Mapoly0006s0084 Marchantia polymorpha HOM05D010424 ORTHO05D255684 1.1e-17 95.9 436 23.6
Mapoly0012s0092 Marchantia polymorpha HOM05D010424 ORTHO05D255824 1.4e-15 89.0 464 23.3
SEGI_36099 Sequoiadendron giganteum HOM05D003005 ORTHO05D030467 2.2e-10 71.6 401 22.7
PSO478G1885 Papaver somniferum HOM05D002809 ORTHO05D004563 2.9e-10 71.2 333 24.6
PSO017G6955 Papaver somniferum HOM05D002809 ORTHO05D004563 5.0e-10 70.5 333 24.3
Pp3c9_6080 Physcomitrium patens HOM05D002809 ORTHO05D004563 5.0e-10 70.5 405 23.0
Mapoly0031s0142 Marchantia polymorpha HOM05D010424 ORTHO05D252601 1.1e-09 69.3 460 22.2
SMO304G0062 Selaginella moellendorffii HOM05D003005 ORTHO05D004170 1.1e-09 69.3 299 26.8
Pp3c3_33090 Physcomitrium patens HOM05D030659 ORTHO05D009385 1.9e-09 68.6 294 24.8
Carub.0001s2587 Capsella rubella HOM05D002809 ORTHO05D004563 4.2e-09 67.4 383 23.0
Pp3c11_18710 Physcomitrium patens HOM05D004302 ORTHO05D004939 4.2e-09 67.4 425 21.6
BolC5t31323H Brassica oleracea HOM05D002809 ORTHO05D004563 5.5e-09 67.0 333 23.7
SMO276G0031 Selaginella moellendorffii HOM05D007753 ORTHO05D009385 5.5e-09 67.0 241 25.7
C05p26040 Brassica napus HOM05D002809 ORTHO05D004563 1.2e-08 65.9 333 23.4
A09p38610 Brassica napus HOM05D002809 ORTHO05D004563 1.6e-08 65.5 333 23.1
SEGI_38976 Sequoiadendron giganteum HOM05D002809 ORTHO05D004939 2.7e-08 64.7 362 24.9
SEGI_04786 Sequoiadendron giganteum HOM05D003005 ORTHO05D026051 1.0e-07 62.8 344 22.1
C07p17870 Brassica napus HOM05D002809 ORTHO05D004563 1.4e-07 62.4 318 23.3
BolC7t42293H Brassica oleracea HOM05D002809 ORTHO05D004563 1.4e-07 62.4 318 23.3
Mapoly0002s0187 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.4e-07 62.4 360 21.9
Rhsim02G0109800 Rhododendron simsii HOM05D002809 ORTHO05D004563 1.8e-07 62.0 407 22.1
SMO364G0869 Selaginella moellendorffii HOM05D003005 ORTHO05D004563 2.3e-07 61.6 306 23.5
BcaC05g26549 Brassica carinata HOM05D002809 ORTHO05D004563 3.0e-07 61.2 333 22.8
Mapoly0014s0188 Marchantia polymorpha HOM05D002809 ORTHO05D004563 3.0e-07 61.2 309 25.9
A07p11920 Brassica napus HOM05D002809 ORTHO05D004563 3.9e-07 60.8 342 21.6
SMO351G0091 Selaginella moellendorffii HOM05D005977 ORTHO05D007546 8.8e-07 59.7 431 23.2
MSTRG.498 Avicennia marina HOM05D002809 ORTHO05D004563 1.1e-06 59.3 329 22.2
Pp3c24_18510 Physcomitrium patens HOM05D002809 ORTHO05D004939 1.1e-06 59.3 439 21.0
Pp3c19_12060 Physcomitrium patens HOM05D003005 ORTHO05D009385 1.5e-06 58.9 432 23.6
SMO239G0172 Selaginella moellendorffii HOM05D003005 ORTHO05D004563 1.5e-06 58.9 310 23.5
AagrBONN_evm.TU.Sc2ySwM_362.2450 Anthoceros agrestis HOM05D002809 ORTHO05D009361 2.0e-06 58.5 224 25.0
BraA07t28977Z Brassica rapa HOM05D002809 ORTHO05D004563 2.0e-06 58.5 344 22.4
CAN.G70.10 Capsicum annuum HOM05D002809 ORTHO05D004563 2.6e-06 58.2 330 22.1
Pp3c4_2390 Physcomitrium patens HOM05D030659 ORTHO05D310934 2.6e-06 58.2 299 22.7
Aa31LG7G9860 Aethionema arabicum HOM05D002809 ORTHO05D004563 4.4e-06 57.4 327 23.5
AT1G27340 Arabidopsis thaliana HOM05D002809 ORTHO05D004563 4.4e-06 57.4 317 22.4
EL10Ac6g13516 Beta vulgaris HOM05D002809 ORTHO05D004563 5.7e-06 57.0 322 23.6
Mapoly0037s0105 Marchantia polymorpha HOM05D010424 ORTHO05D253876 9.7e-06 56.2 239 24.7
Zm00001eb143020 Zea mays HOM05D002809 ORTHO05D004563 9.7e-06 56.2 313 21.4


User provided reference genes

Program Settings