Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0060s0002 Marchantia polymorpha HOM05D005663 ORTHO05D007258 8.5e-41 169.9 83 100.0
Mapoly0058s0022 Marchantia polymorpha HOM05D005663 ORTHO05D007258 1.1e-32 142.9 79 88.6
Pp3c3_12020 Physcomitrium patens HOM05D005663 ORTHO05D007258 1.0e-22 109.8 79 68.4
SEGI_39378 Sequoiadendron giganteum HOM05D005663 ORTHO05D007258 3.3e-21 104.8 79 63.3
Aqoxy3G02633 Aquilegia oxysepala HOM05D005663 ORTHO05D007258 9.7e-21 103.2 79 62.0
MBI09_g20114_MAGBIO Magnolia biondii HOM05D005663 ORTHO05D007258 9.7e-21 103.2 77 63.6
HanXRQChr15g0490251 Helianthus annuus HOM05D005663 ORTHO05D007258 1.3e-20 102.8 77 61.0
GSVIVG01026586001 Vitis vinifera HOM05D005663 ORTHO05D007258 2.2e-20 102.1 79 60.8
MBI09_g18623_MAGBIO Magnolia biondii HOM05D005663 ORTHO05D007258 2.8e-20 101.7 77 62.3
Ah.03g146600 Amaranthus hybridus HOM05D005663 ORTHO05D007258 4.8e-20 100.9 81 60.5
CANSAT01G3211 Cannabis sativa HOM05D005663 ORTHO05D007258 4.8e-20 100.9 77 59.7
Cpa.g.c33395.2 Carica papaya HOM05D005663 ORTHO05D007258 4.8e-20 100.9 80 62.5
Haze_25195 Corylus avellana HOM05D005663 ORTHO05D007258 6.3e-20 100.5 77 62.3
CDE12G0169 Ceratophyllum demersum HOM05D005663 ORTHO05D007258 1.1e-19 99.8 79 59.5
ECA238G2757 Erigeron canadensis HOM05D005663 ORTHO05D007258 1.1e-19 99.8 77 61.0
PSO541G2505 Papaver somniferum HOM05D005663 ORTHO05D007258 1.1e-19 99.8 79 58.2
PSO675G3544 Papaver somniferum HOM05D005663 ORTHO05D007258 1.1e-19 99.8 79 58.2
SMO358G0575 Selaginella moellendorffii HOM05D005663 ORTHO05D007258 1.1e-19 99.8 77 61.0
Ciclev10026263m.g Citrus clementina HOM05D005663 ORTHO05D007258 1.4e-19 99.4 77 62.3
CDE04G2754 Ceratophyllum demersum HOM05D005663 ORTHO05D007258 1.8e-19 99.0 79 60.8
Haze_25191 Corylus avellana HOM05D005663 ORTHO05D007258 1.8e-19 99.0 76 61.8
TWI75G0275 Tripterygium wilfordii HOM05D005663 ORTHO05D007258 1.8e-19 99.0 79 58.2
VMungo0251G2076 Vigna mungo HOM05D005663 ORTHO05D007258 1.8e-19 99.0 79 57.0
COL.COLO4_22418 Corchorus olitorius HOM05D005663 ORTHO05D007258 3.1e-19 98.2 79 59.5
Lsat_1_v5_gn_4_138241 Lactuca sativa HOM05D005663 ORTHO05D007258 4.1e-19 97.8 76 60.5
Phvul.002G269000 Phaseolus vulgaris HOM05D005663 ORTHO05D007258 4.1e-19 97.8 79 57.0
TAR381G0497 Trochodendron aralioides HOM05D005663 ORTHO05D007258 4.1e-19 97.8 77 61.0
TAR625G0848 Trochodendron aralioides HOM05D005663 ORTHO05D007258 4.1e-19 97.8 77 61.0
C03p04720 Brassica napus HOM05D005663 ORTHO05D007258 7.0e-19 97.1 79 58.2
BolC3t13007H Brassica oleracea HOM05D005663 ORTHO05D007258 7.0e-19 97.1 79 58.2
Glyma.05G188200 Glycine max HOM05D005663 ORTHO05D007258 7.0e-19 97.1 79 58.2
Glyma.08G146300 Glycine max HOM05D005663 ORTHO05D007258 7.0e-19 97.1 79 58.2
SalBow2G3104 Salvia bowleyana HOM05D005663 ORTHO05D007258 7.0e-19 97.1 79 59.5
unitig_899.g14706 Utricularia gibba HOM05D005663 ORTHO05D007258 7.0e-19 97.1 79 57.0
Atru.chr4.540 Acer truncatum HOM05D005663 ORTHO05D007258 9.1e-19 96.7 77 61.0
Manes.13G086600 Manihot esculenta HOM05D005663 ORTHO05D007258 9.1e-19 96.7 79 60.8
Lj4A856T34 Lonicera japonica HOM05D005663 ORTHO05D007258 1.2e-18 96.3 81 60.5
Medtr8g092680 Medicago truncatula HOM05D005663 ORTHO05D007258 1.2e-18 96.3 76 61.8
PGR119G0285 Punica granatum HOM05D005663 ORTHO05D007258 1.6e-18 95.9 77 61.0
Sc03g0004740 Simmondsia chinensis HOM05D005663 ORTHO05D007258 1.6e-18 95.9 75 60.0
PGSC0003DMG400003986 Solanum tuberosum HOM05D005663 ORTHO05D007258 1.6e-18 95.9 79 58.2
Hund03480 Selenicereus undatus HOM05D005663 ORTHO05D007258 2.0e-18 95.5 77 57.1
arahy.Tifrunner.gnm1.ann1.3896ZX Arachis hypogaea HOM05D005663 ORTHO05D007258 2.7e-18 95.1 80 57.5
arahy.Tifrunner.gnm1.ann1.ILAW0V Arachis hypogaea HOM05D005663 ORTHO05D007258 2.7e-18 95.1 77 59.7
CiPaw.03G123800 Carya illinoinensis HOM05D005663 ORTHO05D007258 2.7e-18 95.1 76 59.2
Ca_17664_v3 Cicer arietinum L. HOM05D005663 ORTHO05D007258 2.7e-18 95.1 76 59.2
QL06p051868 Quercus lobata HOM05D005663 ORTHO05D007258 2.7e-18 95.1 77 59.7
TPR.G2176 Trifolium pratense HOM05D005663 ORTHO05D007258 2.7e-18 95.1 76 60.5
Gorai.002G151300 Gossypium raimondii HOM05D005663 ORTHO05D007258 3.5e-18 94.7 78 57.7
Hma1.2p1_0006F.1_g004880 Hydrangea macrophylla HOM05D005663 ORTHO05D007258 3.5e-18 94.7 77 61.0
Actinidia06667 Actinidia chinensis HOM05D005663 ORTHO05D007258 4.5e-18 94.4 77 61.0
arahy.Tifrunner.gnm1.ann1.6JE7GZ Arachis hypogaea HOM05D005663 ORTHO05D007258 4.5e-18 94.4 77 59.7
Eucgr.I00244 Eucalyptus grandis HOM05D005663 ORTHO05D007258 4.5e-18 94.4 79 60.8
FvH4_1g23570 Fragaria vesca HOM05D005663 ORTHO05D007258 4.5e-18 94.4 77 59.7
FAN19G1272 Fragaria x ananassa HOM05D005663 ORTHO05D007258 4.5e-18 94.4 77 59.7
FAN26G2344 Fragaria x ananassa HOM05D005663 ORTHO05D007258 4.5e-18 94.4 77 59.7
Rhsim08G0003400 Rhododendron simsii HOM05D005663 ORTHO05D007258 4.5e-18 94.4 77 61.0
Lj4g0014342 Lotus japonicus HOM05D005663 ORTHO05D007258 5.9e-18 94.0 76 60.5
Sopen11g001350 Solanum pennellii HOM05D005663 ORTHO05D007258 5.9e-18 94.0 79 57.0
arahy.Tifrunner.gnm1.ann1.67XQRG Arachis hypogaea HOM05D005663 ORTHO05D007258 7.7e-18 93.6 77 59.7
Gohir.D06G155500 Gossypium hirsutum HOM05D005663 ORTHO05D007258 7.7e-18 93.6 79 55.7
Gorai.010G181700 Gossypium raimondii HOM05D005663 ORTHO05D007258 7.7e-18 93.6 79 55.7
Lalb_Chr12g0203331 Lupinus albus HOM05D005663 ORTHO05D007258 7.7e-18 93.6 77 57.1
RcHm_v2.0_Chr2g0119121 Rosa chinensis HOM05D005663 ORTHO05D007258 7.7e-18 93.6 77 58.4
Sabra16G0195100 Salix brachista HOM05D005663 ORTHO05D007258 7.7e-18 93.6 77 59.7
Thecc.01G121000 Theobroma cacao HOM05D005663 ORTHO05D007258 7.7e-18 93.6 79 57.0
Duzib264G0763 Durio zibethinus HOM05D005663 ORTHO05D007258 1.0e-17 93.2 79 55.7
Gohir.A06G149400 Gossypium hirsutum HOM05D005663 ORTHO05D007258 1.0e-17 93.2 79 55.7
Nitab4.5_0002064g0060 Nicotiana tabacum HOM05D005663 ORTHO05D007258 1.0e-17 93.2 79 55.7
Sp6g33590 Schrenkiella parvula HOM05D005663 ORTHO05D007258 1.0e-17 93.2 79 55.7
THA.LOC104818465 Tarenaya hassleriana HOM05D005663 ORTHO05D007258 1.0e-17 93.2 79 57.0
Thhalv10014407m.g Eutrema salsugineum HOM05D005663 ORTHO05D007258 1.3e-17 92.8 79 55.7
Solyc11g005340.3 Solanum lycopersicum HOM05D005663 ORTHO05D007258 1.3e-17 92.8 79 55.7
CARHR203580 Cardamine hirsuta HOM05D005663 ORTHO05D007258 1.7e-17 92.4 79 54.4
CAN.G249.7 Capsicum annuum HOM05D005663 ORTHO05D007258 2.2e-17 92.0 79 57.0
Peaxi162Scf00025g02122 Petunia axillaris HOM05D005663 ORTHO05D007258 2.2e-17 92.0 78 56.4
Psat7g048760 Pisum sativum HOM05D005663 ORTHO05D007258 2.2e-17 92.0 75 58.7
SGA_v2.0_scaffold137G35114 Striga asiatica HOM05D005663 ORTHO05D007258 2.2e-17 92.0 76 56.6
A03p04280 Brassica napus HOM05D005663 ORTHO05D007258 2.9e-17 91.7 79 54.4
BraA03t09772Z Brassica rapa HOM05D005663 ORTHO05D007258 2.9e-17 91.7 79 54.4
Carub.0006s0824 Capsella rubella HOM05D005663 ORTHO05D007258 2.9e-17 91.7 79 55.7
Os04g0422000 Oryza sativa ssp. japonica HOM05D005663 ORTHO05D007258 3.8e-17 91.3 80 57.5
Potri.001G309300 Populus trichocarpa HOM05D005663 ORTHO05D007258 3.8e-17 91.3 77 58.4
Zm00001eb083210 Zea mays HOM05D005663 ORTHO05D007258 3.8e-17 91.3 79 59.5
Dinv09933 Davidia involucrata HOM05D005663 ORTHO05D007258 5.0e-17 90.9 77 57.1
Nn5g28726 Nelumbo nucifera HOM05D005663 ORTHO05D007258 5.0e-17 90.9 77 58.4
AL6G20230 Arabidopsis lyrata HOM05D005663 ORTHO05D007258 6.5e-17 90.5 79 54.4
AT5G09820 Arabidopsis thaliana HOM05D005663 ORTHO05D007258 6.5e-17 90.5 79 54.4
Nitab4.5_0009320g0020 Nicotiana tabacum HOM05D005663 ORTHO05D007258 6.5e-17 90.5 79 53.2
Oeu047646.1 Olea europaea HOM05D005663 ORTHO05D007258 8.5e-17 90.1 77 57.1
vmacro18658 Vaccinium macrocarpon HOM05D005663 ORTHO05D007258 8.5e-17 90.1 77 57.1
Cc07_g17370 Coffea canephora HOM05D005663 ORTHO05D007258 1.1e-16 89.7 76 56.6
MD15G1343200 Malus domestica HOM05D005663 ORTHO05D007258 2.5e-16 88.6 77 55.8
Aa31LG3G17290 Aethionema arabicum HOM05D005663 ORTHO05D007258 3.2e-16 88.2 79 53.2
Cre03.g188700 Chlamydomonas reinhardtii HOM05D005663 ORTHO05D007258 3.2e-16 88.2 76 56.6
COL.COLO4_22420 Corchorus olitorius HOM05D005663 ORTHO05D007258 3.2e-16 88.2 82 53.7
DCAR_027256 Daucus carota HOM05D005663 ORTHO05D007258 5.5e-16 87.4 67 62.7
Duzib147G1259 Durio zibethinus HOM05D005663 ORTHO05D007258 7.2e-16 87.0 79 54.4
Migut.H01114 Erythranthe guttata HOM05D005663 ORTHO05D007258 7.2e-16 87.0 79 53.2
arahy.Tifrunner.gnm1.ann1.4DFA8P Arachis hypogaea HOM05D005663 ORTHO05D007258 1.2e-15 86.3 70 58.6
HPP92_016149 Vanilla planifolia HOM05D005663 ORTHO05D007258 2.7e-15 85.1 78 55.1
arahy.Tifrunner.gnm1.ann1.B1HTRM Arachis hypogaea HOM05D005663 ORTHO05D007258 1.8e-14 82.4 70 60.0
Haze_25187 Corylus avellana HOM05D005663 ORTHO05D007258 2.3e-14 82.0 65 63.1
arahy.Tifrunner.gnm1.ann1.YJV2YZ Arachis hypogaea HOM05D005663 ORTHO05D007258 6.8e-14 80.5 77 54.5
Atru.chr4.1044 Acer truncatum HOM05D005663 ORTHO05D007258 4.8e-12 74.3 77 46.8
BcaNung05557 Brassica carinata HOM05D005663 ORTHO05D007258 1.8e-11 72.4 65 53.8
RcHm_v2.0_Chr2g0119061 Rosa chinensis HOM05D005663 ORTHO05D007258 3.1e-11 71.6 65 55.4
Atru.chr4.1055 Acer truncatum HOM05D005663 ORTHO05D007258 7.0e-11 70.5 74 45.9
EL10Ac6g15254 Beta vulgaris HOM05D005663 ORTHO05D007258 2.5e-08 62.0 77 42.9
arahy.Tifrunner.gnm1.ann1.A2IFSH Arachis hypogaea HOM05D005663 ORTHO05D007258 8.0e-07 57.0 41 68.3
arahy.Tifrunner.gnm1.ann1.I27Z20 Arachis hypogaea HOM05D005663 ORTHO05D007258 8.0e-07 57.0 41 68.3
arahy.Tifrunner.gnm1.ann1.UQF3WB Arachis hypogaea HOM05D005663 ORTHO05D007258 8.0e-07 57.0 41 68.3
arahy.Tifrunner.gnm1.ann1.E1FWBU Arachis hypogaea HOM05D005663 ORTHO05D007258 2.3e-06 55.5 40 67.5


User provided reference genes

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