Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 2.4e-159 565.5 282 100.0
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 1.9e-44 183.7 199 50.8
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 4.2e-39 166.0 194 47.4
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 7.8e-38 161.8 168 50.6
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 6.6e-37 158.7 208 41.3
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 8.7e-37 158.3 161 49.1
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 8.7e-37 158.3 216 43.5
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 1.1e-36 157.9 208 41.3
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 1.9e-36 157.1 155 51.6
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 2.5e-36 156.8 220 40.0
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 3.3e-36 156.4 216 43.5
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 3.3e-36 156.4 191 45.5
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 4.3e-36 156.0 208 40.9
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 4.3e-36 156.0 155 51.0
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 7.3e-36 155.2 203 41.4
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 7.3e-36 155.2 203 41.4
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 7.3e-36 155.2 165 48.5
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 1.3e-35 154.5 191 44.0
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.6e-35 154.1 186 46.2
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 2.8e-35 153.3 180 44.4
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 2.8e-35 153.3 209 42.6
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 3.6e-35 152.9 174 45.4
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 4.8e-35 152.5 191 44.0
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 4.8e-35 152.5 161 50.9
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 1.1e-34 151.4 167 46.1
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 1.1e-34 151.4 185 43.2
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 1.1e-34 151.4 156 49.4
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 1.1e-34 151.4 171 47.4
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 1.1e-34 151.4 155 50.3
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 1.4e-34 151.0 161 47.2
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 1.4e-34 151.0 180 43.3
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 1.4e-34 151.0 161 47.2
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 1.4e-34 151.0 172 47.1
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 1.8e-34 150.6 171 45.6
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 2.4e-34 150.2 194 41.8
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 2.4e-34 150.2 186 43.0
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 5.3e-34 149.1 161 46.6
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 5.3e-34 149.1 161 47.8
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 5.3e-34 149.1 189 43.9
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 6.9e-34 148.7 155 49.0
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 6.9e-34 148.7 183 44.8
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 9.0e-34 148.3 163 46.6
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 9.0e-34 148.3 202 42.6
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 1.2e-33 147.9 163 46.0
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 1.2e-33 147.9 159 47.2
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 1.5e-33 147.5 155 49.7
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 1.5e-33 147.5 161 46.0
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 1.5e-33 147.5 161 47.8
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 2.0e-33 147.1 161 46.0
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 2.0e-33 147.1 155 48.4
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 2.0e-33 147.1 161 45.3
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 2.6e-33 146.7 161 48.4
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 2.6e-33 146.7 239 38.5
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 4.4e-33 146.0 155 46.5
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 4.4e-33 146.0 168 47.0
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 5.8e-33 145.6 160 45.0
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 7.6e-33 145.2 194 40.2
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 7.6e-33 145.2 163 44.8
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 1.7e-32 144.1 158 47.5
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 1.7e-32 144.1 161 44.1
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 2.2e-32 143.7 161 46.0
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 2.2e-32 143.7 161 45.3
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 2.9e-32 143.3 161 45.3
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 3.8e-32 142.9 155 46.5
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 3.8e-32 142.9 198 41.9
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 3.8e-32 142.9 161 44.1
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 3.8e-32 142.9 166 46.4
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 8.4e-32 141.7 300 33.3
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 8.4e-32 141.7 161 45.3
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 8.4e-32 141.7 158 44.9
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 8.4e-32 141.7 205 41.5
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 1.4e-31 141.0 155 45.8
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 1.9e-31 140.6 195 42.1
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 2.4e-31 140.2 179 43.6
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 2.4e-31 140.2 161 43.5
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 2.4e-31 140.2 110 53.6
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 1.2e-30 137.9 209 40.2
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.6e-30 137.5 142 46.5
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 3.5e-30 136.3 194 41.2
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 6.0e-30 135.6 161 42.9
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 2.3e-29 133.7 162 45.7
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 3.0e-29 133.3 127 48.0
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 3.9e-29 132.9 167 44.9
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 3.9e-29 132.9 156 44.2
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 5.1e-29 132.5 158 47.5
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 6.6e-29 132.1 199 41.2
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 8.7e-29 131.7 123 48.0
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 8.7e-29 131.7 155 43.9
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 4.3e-28 129.4 214 39.3
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 2.8e-27 126.7 99 60.6
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 3.6e-27 126.3 156 41.0
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 3.1e-26 123.2 139 43.2
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 4.0e-26 122.9 168 44.6
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 6.9e-26 122.1 109 51.4
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 2.9e-24 116.7 93 53.8
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 3.2e-23 113.2 155 38.7
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 4.2e-23 112.8 209 37.3
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 3.9e-21 106.3 83 60.2
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 3.3e-20 103.2 189 38.1
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 1.3e-19 101.3 123 43.1
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 2.0e-17 94.0 85 48.2
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 7.6e-17 92.0 239 28.9
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 9.3e-15 85.1 193 37.3
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 9.3e-15 85.1 193 37.3
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 2.7e-14 83.6 111 45.0
AagrBONN_evm.TU.Sc2ySwM_117.739 Anthoceros agrestis HOM05D000461 ORTHO05D009042 1.0e-13 81.6 54 74.1
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 1.1e-12 78.2 86 45.3
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.5e-12 77.8 97 48.5
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 2.5e-12 77.0 102 39.2
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 1.4e-10 71.2 96 35.4
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 9.3e-07 58.5 194 27.3


User provided reference genes

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