Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0058s0026 Marchantia polymorpha HOM05D005159 ORTHO05D006237 9.8e-66 253.4 139 100.0
Ca_13657_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 6.4e-33 144.4 132 52.3
Pp3c10_24110 Physcomitrium patens HOM05D005159 ORTHO05D006237 1.9e-32 142.9 130 54.6
Peaxi162Scf00479g00439 Petunia axillaris HOM05D005159 ORTHO05D006237 2.4e-32 142.5 132 52.3
Glyma.07G204700 Glycine max HOM05D005159 ORTHO05D006237 5.4e-32 141.4 132 53.0
Lju237A1T66 Lonicera japonica HOM05D005159 ORTHO05D006237 7.1e-32 141.0 132 51.5
PGSC0003DMG400010100 Solanum tuberosum HOM05D005159 ORTHO05D006237 7.1e-32 141.0 132 51.5
CAN.G497.25 Capsicum annuum HOM05D005159 ORTHO05D006237 1.2e-31 140.2 132 50.8
SEGI_21798 Sequoiadendron giganteum HOM05D005159 ORTHO05D006237 1.2e-31 140.2 123 57.7
Oeu062202.1 Olea europaea HOM05D005159 ORTHO05D006237 2.7e-31 139.0 132 53.8
Solyc02g089600.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 2.7e-31 139.0 132 50.8
Migut.K00872 Erythranthe guttata HOM05D005159 ORTHO05D006237 4.6e-31 138.3 132 53.0
SGA_v2.0_scaffold10G05141 Striga asiatica HOM05D005159 ORTHO05D006237 4.6e-31 138.3 132 53.0
unitig_61.g26382 Utricularia gibba HOM05D005159 ORTHO05D006237 7.8e-31 137.5 132 52.3
Dinv33896 Davidia involucrata HOM05D005159 ORTHO05D006237 1.0e-30 137.1 132 51.5
CDE01G0131 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 1.3e-30 136.7 132 50.0
Eucgr.I02096 Eucalyptus grandis HOM05D005159 ORTHO05D006237 1.7e-30 136.3 132 50.0
Medtr8g085800 Medicago truncatula HOM05D005159 ORTHO05D006237 1.7e-30 136.3 131 50.4
Sopen03g009860 Solanum pennellii HOM05D005159 ORTHO05D006237 1.7e-30 136.3 132 50.0
PGSC0003DMG400018775 Solanum tuberosum HOM05D005159 ORTHO05D006237 1.7e-30 136.3 132 50.0
Solyc03g046350.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 2.3e-30 136.0 132 50.0
Actinidia18107 Actinidia chinensis HOM05D005159 ORTHO05D006237 3.9e-30 135.2 137 51.8
Nn1g09575 Nelumbo nucifera HOM05D005159 ORTHO05D006237 3.9e-30 135.2 132 49.2
Phvul.008G006700 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 3.9e-30 135.2 132 50.0
Psat7g186040 Pisum sativum HOM05D002527 ORTHO05D002865 5.1e-30 134.8 127 52.0
Prupe.3G244000 Prunus persica HOM05D005159 ORTHO05D006237 5.1e-30 134.8 132 51.5
Sed0002827 Sechium edule HOM05D005159 ORTHO05D006237 5.1e-30 134.8 132 53.0
MSTRG.15424 Avicennia marina HOM05D005159 ORTHO05D006237 6.6e-30 134.4 132 51.5
THA.LOC104805544 Tarenaya hassleriana HOM05D005159 ORTHO05D006237 6.6e-30 134.4 133 51.1
TWI32G0838 Tripterygium wilfordii HOM05D005159 ORTHO05D006237 6.6e-30 134.4 133 51.9
Ca_26327_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 8.6e-30 134.0 134 48.5
Glyma.13G171200 Glycine max HOM05D005159 ORTHO05D006237 8.6e-30 134.0 125 53.6
AL7G51700 Arabidopsis lyrata HOM05D005159 ORTHO05D006237 1.1e-29 133.7 133 53.4
MD09G1079700 Malus domestica HOM05D005159 ORTHO05D006237 1.1e-29 133.7 133 51.9
Peaxi162Scf01056g00019 Petunia axillaris HOM05D005159 ORTHO05D006237 1.1e-29 133.7 132 49.2
Sc10g0001500 Simmondsia chinensis HOM05D005159 ORTHO05D006237 1.1e-29 133.7 131 50.4
GSVIVG01036491001 Vitis vinifera HOM05D005159 ORTHO05D006237 1.1e-29 133.7 132 50.0
Aa31LG9G16930 Aethionema arabicum HOM05D005159 ORTHO05D006237 1.5e-29 133.3 133 50.4
AT5G38720 Arabidopsis thaliana HOM05D005159 ORTHO05D006237 1.5e-29 133.3 133 52.6
BcaC02g09665 Brassica carinata HOM05D005159 ORTHO05D006237 1.5e-29 133.3 133 53.4
C04p45340 Brassica napus HOM05D005159 ORTHO05D006237 1.5e-29 133.3 133 53.4
BolC4t26116H Brassica oleracea HOM05D005159 ORTHO05D006237 1.5e-29 133.3 133 53.4
BraA04t16828Z Brassica rapa HOM05D005159 ORTHO05D006237 1.5e-29 133.3 133 53.4
Carub.0007s3714 Capsella rubella HOM05D005159 ORTHO05D006237 1.5e-29 133.3 133 51.9
Ciclev10012260m.g Citrus clementina HOM05D005159 ORTHO05D006237 1.5e-29 133.3 132 50.0
Nitab4.5_0001982g0030 Nicotiana tabacum HOM05D005159 ORTHO05D006237 1.5e-29 133.3 132 49.2
MD17G1070200 Malus domestica HOM05D005159 ORTHO05D006237 1.9e-29 132.9 133 51.1
Medtr4g051625 Medicago truncatula HOM05D005159 ORTHO05D006237 1.9e-29 132.9 132 48.5
Psat6g166480 Pisum sativum HOM05D005159 ORTHO05D006237 2.5e-29 132.5 132 50.0
SalBow1G7987 Salvia bowleyana HOM05D005159 ORTHO05D006237 2.5e-29 132.5 132 50.8
Gohir.A13G118100 Gossypium hirsutum HOM05D005159 ORTHO05D006237 3.3e-29 132.1 135 51.9
Nitab4.5_0006224g0050 Nicotiana tabacum HOM05D005159 ORTHO05D006237 4.3e-29 131.7 132 49.2
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea HOM05D005159 ORTHO05D006237 5.6e-29 131.3 132 47.0
A04p11610 Brassica napus HOM05D005159 ORTHO05D006237 5.6e-29 131.3 133 52.6
Gohir.D13G121900 Gossypium hirsutum HOM05D005159 ORTHO05D006237 5.6e-29 131.3 135 51.9
Manes.01G106500 Manihot esculenta HOM05D005159 ORTHO05D006237 7.3e-29 131.0 131 49.6
Sp7g03200 Schrenkiella parvula HOM05D005159 ORTHO05D006237 7.3e-29 131.0 133 52.6
TPR.G37714 Trifolium pratense HOM05D005159 ORTHO05D006237 7.3e-29 131.0 132 50.0
BcaB06g27239 Brassica carinata HOM05D005159 ORTHO05D006237 9.5e-29 130.6 133 52.6
Gorai.013G136600 Gossypium raimondii HOM05D005159 ORTHO05D006237 9.5e-29 130.6 135 51.1
MBI15_g18197_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 9.5e-29 130.6 132 50.0
ClCG11G001130 Citrullus lanatus HOM05D005159 ORTHO05D006237 1.2e-28 130.2 131 49.6
Cc08_g12050 Coffea canephora HOM05D005159 ORTHO05D006237 1.2e-28 130.2 132 47.7
Cpa.g.sc70.15 Carica papaya HOM05D005159 ORTHO05D006237 1.6e-28 129.8 132 50.0
CsaV3_5G013180 Cucumis sativus L. HOM05D005159 ORTHO05D006237 2.8e-28 129.0 132 48.5
Thhalv10028147m.g Eutrema salsugineum HOM05D005159 ORTHO05D006237 2.8e-28 129.0 133 50.4
Hund27686 Selenicereus undatus HOM05D005159 ORTHO05D006237 3.6e-28 128.6 130 49.2
Hund27687 Selenicereus undatus HOM05D005159 ORTHO05D006237 3.6e-28 128.6 130 49.2
Actinidia36292 Actinidia chinensis HOM05D005159 ORTHO05D006237 4.7e-28 128.3 123 50.4
Duzib211G0079 Durio zibethinus HOM05D005159 ORTHO05D006237 6.2e-28 127.9 135 50.4
MELO3C020033.2 Cucumis melo HOM05D005159 ORTHO05D006237 8.1e-28 127.5 132 47.7
EL10Ac7g16490 Beta vulgaris HOM05D005159 ORTHO05D006237 1.4e-27 126.7 131 46.6
AUR62016605 Chenopodium quinoa HOM05D005159 ORTHO05D006237 1.4e-27 126.7 132 46.2
Ah.15g094970 Amaranthus hybridus HOM05D005159 ORTHO05D006237 1.8e-27 126.3 131 48.1
CDE02G0002 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 1.8e-27 126.3 125 48.0
Ah.08g217340 Amaranthus hybridus HOM05D005159 ORTHO05D006237 2.3e-27 125.9 131 48.1
Lsat_1_v5_gn_8_24161 Lactuca sativa HOM05D005159 ORTHO05D006237 2.3e-27 125.9 136 48.5
Sed0024356 Sechium edule HOM05D005159 ORTHO05D006237 2.3e-27 125.9 132 47.7
ECA240G3626 Erigeron canadensis HOM05D005159 ORTHO05D006237 3.1e-27 125.6 132 46.2
QL02p054338 Quercus lobata HOM05D005159 ORTHO05D006237 3.1e-27 125.6 124 50.8
CANSAT21G0179 Cannabis sativa HOM05D005159 ORTHO05D006237 5.2e-27 124.8 132 46.2
DCAR_026285 Daucus carota HOM05D005159 ORTHO05D006237 5.2e-27 124.8 136 48.5
Medtr1g090650 Medicago truncatula HOM05D005159 ORTHO05D006237 1.2e-26 123.6 132 46.2
Potri.017G108700 Populus trichocarpa HOM05D005159 ORTHO05D006237 1.5e-26 123.2 132 47.0
Sabra04G0075100 Salix brachista HOM05D005159 ORTHO05D006237 1.5e-26 123.2 132 46.2
CiPaw.03G007500 Carya illinoinensis HOM05D005159 ORTHO05D006237 2.0e-26 122.9 124 49.2
Thecc.04G145900 Theobroma cacao HOM05D005159 ORTHO05D006237 2.0e-26 122.9 135 48.1
HanXRQChr03g0078031 Helianthus annuus HOM05D005159 ORTHO05D006237 2.6e-26 122.5 132 46.2
PSO017G6426 Papaver somniferum HOM05D005159 ORTHO05D006237 2.6e-26 122.5 130 46.2
C06p18340 Brassica napus HOM05D005159 ORTHO05D006237 3.4e-26 122.1 133 51.9
BolC6t37046H Brassica oleracea HOM05D005159 ORTHO05D006237 3.4e-26 122.1 133 51.9
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea HOM05D005159 ORTHO05D006237 9.9e-26 120.6 132 43.9
PGR004G1892 Punica granatum HOM05D005159 ORTHO05D006237 9.9e-26 120.6 134 43.3
Potri.004G106900 Populus trichocarpa HOM05D005159 ORTHO05D006237 1.3e-25 120.2 132 46.2
FvH4_6g45790 Fragaria vesca HOM05D005159 ORTHO05D006237 1.7e-25 119.8 134 46.3
FAN09G0042 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.7e-25 119.8 134 46.3
Aqoxy3G00614 Aquilegia oxysepala HOM05D005159 ORTHO05D006237 2.9e-25 119.0 130 45.4
SMO196G0176 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 3.7e-25 118.6 147 42.2
FAN02G2008 Fragaria x ananassa HOM05D005159 ORTHO05D006237 4.9e-25 118.2 132 46.2
Atru.chr11.1725 Acer truncatum HOM05D005159 ORTHO05D006237 1.1e-24 117.1 123 46.3
BcaC08g44401 Brassica carinata HOM05D005159 ORTHO05D006237 1.1e-24 117.1 127 51.2
CSS0007706 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.1e-24 117.1 116 50.0
CSS0013880 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.1e-24 117.1 112 50.9
CSS0044288 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.1e-24 117.1 116 50.0
Os02g0728700 Oryza sativa ssp. japonica HOM05D005159 ORTHO05D006237 1.1e-24 117.1 132 45.5
RcHm_v2.0_Chr2g0163971 Rosa chinensis HOM05D005159 ORTHO05D006237 1.1e-24 117.1 126 47.6
PSO478G0642 Papaver somniferum HOM05D005159 ORTHO05D006237 1.9e-24 116.3 130 44.6
MBI15_g38433_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 5.4e-24 114.8 133 45.9
Sopen02g034320 Solanum pennellii HOM05D005159 ORTHO05D006237 3.5e-23 112.1 132 43.2
ATR0691G244 Amborella trichopoda HOM05D005159 ORTHO05D006237 6.0e-23 111.3 132 44.7
AUR62026768 Chenopodium quinoa HOM05D005159 ORTHO05D006237 7.8e-23 110.9 125 43.2
Phvul.001G061500 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 1.0e-22 110.5 132 43.2
VMungo1383G3720 Vigna mungo HOM05D005159 ORTHO05D006237 1.7e-22 109.8 132 42.4
Zm00001eb253420 Zea mays HOM05D005159 ORTHO05D006237 1.7e-22 109.8 135 42.2
TAR371G0967 Trochodendron aralioides HOM05D005159 ORTHO05D006237 2.3e-22 109.4 112 47.3
HPP92_015315 Vanilla planifolia HOM05D005159 ORTHO05D006237 3.0e-22 109.0 132 41.7
AUR62011452 Chenopodium quinoa HOM05D005159 ORTHO05D006237 3.9e-22 108.6 169 36.1
AagrBONN_evm.TU.Sc2ySwM_369.363 Anthoceros agrestis HOM05D005159 ORTHO05D006237 5.1e-22 108.2 119 52.9
Lj6g0020881 Lotus japonicus HOM05D005159 ORTHO05D006237 5.1e-22 108.2 132 41.7
Lalb_Chr18g0059201 Lupinus albus HOM05D005159 ORTHO05D006237 5.1e-22 108.2 132 42.4
TPR.G28602 Trifolium pratense HOM05D005159 ORTHO05D006237 6.6e-22 107.8 112 46.4
FAN05G5180 Fragaria x ananassa HOM05D005159 ORTHO05D006237 2.5e-21 105.9 151 39.1
Rhsim08G0081100 Rhododendron simsii HOM05D005159 ORTHO05D006237 4.3e-21 105.1 134 41.0
CBR_g4867 Chara braunii HOM05D005159 ORTHO05D006237 5.6e-21 104.8 131 43.5
COL.COLO4_37042 Corchorus olitorius HOM05D005159 ORTHO05D006237 5.6e-21 104.8 120 45.0
SMO234G0023 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 5.6e-21 104.8 109 44.0
vmacro18090 Vaccinium macrocarpon HOM05D005159 ORTHO05D006237 7.3e-21 104.4 134 41.8
TAR629G0318 Trochodendron aralioides HOM05D005159 ORTHO05D006237 1.4e-19 100.1 117 42.7
Nn8g41096 Nelumbo nucifera HOM05D005159 ORTHO05D006237 9.9e-18 94.0 131 37.4
MCO13G254 Micromonas commoda HOM05D005159 ORTHO05D006237 1.7e-17 93.2 140 37.1
CSS0028445 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 4.9e-17 91.7 112 45.5
Haze_14082 Corylus avellana HOM05D005159 ORTHO05D006237 8.4e-17 90.9 104 43.3
CARHR291790 Cardamine hirsuta HOM05D005159 ORTHO05D006237 4.2e-16 88.6 136 39.7
Lj7A7T32 Lonicera japonica HOM05D005159 ORTHO05D006237 5.4e-16 88.2 83 49.4
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea HOM05D005159 ORTHO05D006237 6.0e-15 84.7 123 34.1
TAR629G0746 Trochodendron aralioides HOM05D005159 ORTHO05D006237 2.3e-14 82.8 89 39.3
FAN14G1445 Fragaria x ananassa HOM05D005159 ORTHO05D006237 3.3e-13 79.0 93 46.2
AUR62013504 Chenopodium quinoa HOM05D000258 ORTHO05D006237 2.8e-12 75.9 89 46.1
Cre01.g052200 Chlamydomonas reinhardtii HOM05D005159 ORTHO05D006237 1.5e-10 70.1 131 38.2
PRCOL_00005361 Prasinoderma coloniale HOM05D005159 ORTHO05D006237 1.7e-09 66.6 132 40.2
CBR_g52693 Chara braunii HOM05D005159 ORTHO05D006237 2.9e-09 65.9 133 30.1
Oeu062205.1 Olea europaea HOM05D005159 ORTHO05D006237 8.7e-06 54.3 45 53.3


User provided reference genes

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