Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0057s0105 Marchantia polymorpha HOM05D014172 ORTHO05D256898 1.5e-270 935.6 480 100.0
Mapoly0008s0140 Marchantia polymorpha HOM05D014172 ORTHO05D257004 2.4e-180 636.0 546 65.8
Mapoly0033s0086 Marchantia polymorpha HOM05D014172 ORTHO05D251862 2.4e-172 609.4 527 66.2
Mapoly0092s0037 Marchantia polymorpha HOM05D014172 ORTHO05D252926 2.7e-163 579.3 433 72.7
Mapoly0103s0003 Marchantia polymorpha HOM05D014172 ORTHO05D254758 8.1e-144 514.6 513 60.0
Mapoly0086s0066 Marchantia polymorpha HOM05D014172 ORTHO05D253720 1.4e-143 513.8 527 59.0
Mapoly0048s0096 Marchantia polymorpha HOM05D014172 ORTHO05D255063 9.1e-103 378.3 528 44.1
Mapoly0066s0062 Marchantia polymorpha HOM05D014172 ORTHO05D009563 6.5e-101 372.1 481 46.4
Mapoly0003s0276 Marchantia polymorpha HOM05D014172 ORTHO05D256169 7.0e-87 325.5 445 44.3
Mapoly0001s0258 Marchantia polymorpha HOM05D014172 ORTHO05D254556 3.9e-45 186.8 256 45.3
Mapoly0080s0064 Marchantia polymorpha HOM05D014172 ORTHO05D254282 2.8e-43 180.6 244 44.3
Mapoly0055s0032 Marchantia polymorpha HOM05D022932 ORTHO05D000009 6.0e-22 109.8 213 34.3
Mapoly0055s0036 Marchantia polymorpha HOM05D022932 ORTHO05D000009 6.0e-22 109.8 213 34.3
Mapoly0046s0048 Marchantia polymorpha HOM05D022932 ORTHO05D000009 3.0e-21 107.5 213 33.8
Mapoly0115s0032 Marchantia polymorpha HOM05D022932 ORTHO05D000009 1.1e-18 99.0 213 31.5
Mapoly0046s0049 Marchantia polymorpha HOM05D022932 ORTHO05D000009 2.4e-18 97.8 206 33.0
SHI41854 Sapria himalayana HOM05D000030 ORTHO05D000009 6.9e-10 69.7 229 25.8
Atru.chr6.238 Acer truncatum HOM05D000030 ORTHO05D000009 2.0e-09 68.2 215 25.6
Atru.chr6.241 Acer truncatum HOM05D000030 ORTHO05D000009 2.0e-09 68.2 215 25.6
Manes.03G090703 Manihot esculenta HOM05D000030 ORTHO05D000009 2.0e-09 68.2 210 29.0
SHI06862 Sapria himalayana HOM05D000030 ORTHO05D000009 2.0e-09 68.2 229 25.3
TWI31G1164 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 2.0e-09 68.2 220 25.5
AUR62003894 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.6e-09 66.2 214 27.6
FvH4_1g22352 Fragaria vesca HOM05D000030 ORTHO05D000009 1.3e-08 65.5 231 26.0
SHI25723 Sapria himalayana HOM05D000030 ORTHO05D000009 1.3e-08 65.5 229 24.5
SHI33171 Sapria himalayana HOM05D000030 ORTHO05D000009 1.7e-08 65.1 229 25.3
AUR62004482 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.2e-08 64.7 233 26.2
Mapoly0012s0101 Marchantia polymorpha HOM05D000030 ORTHO05D000009 2.9e-08 64.3 215 26.5
Ah.00g238000 Amaranthus hybridus HOM05D000030 ORTHO05D000009 3.8e-08 63.9 231 27.7
Ah.12g059630 Amaranthus hybridus HOM05D000030 ORTHO05D000009 3.8e-08 63.9 213 26.8
AUR62020492 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.8e-08 63.9 213 28.2
Gorai.011G212800 Gossypium raimondii HOM05D000030 ORTHO05D000009 3.8e-08 63.9 213 26.8
RcHm_v2.0_Chr1g0341811 Rosa chinensis HOM05D000030 ORTHO05D000009 4.9e-08 63.5 188 26.1
SHI17636 Sapria himalayana HOM05D000030 ORTHO05D000009 4.9e-08 63.5 209 25.8
AUR62008835 Chenopodium quinoa HOM05D000030 ORTHO05D000009 6.5e-08 63.2 228 25.9
Rhsim10G0136600 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.4e-08 62.8 323 22.6
SHI13135 Sapria himalayana HOM05D000030 ORTHO05D000009 8.4e-08 62.8 209 26.3
Atru.chr5.1722 Acer truncatum HOM05D000030 ORTHO05D000009 1.1e-07 62.4 216 28.7
Hma1.2p1_0572F.1_g181290 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.1e-07 62.4 213 26.8
Sed0000667 Sechium edule HOM05D000030 ORTHO05D000009 1.1e-07 62.4 212 25.0
Atru.ctg1438.3 Acer truncatum HOM05D000030 ORTHO05D000009 1.4e-07 62.0 216 27.8
PSO782G5610 Papaver somniferum HOM05D000030 ORTHO05D015644 1.4e-07 62.0 236 28.0
Manes.03G090444 Manihot esculenta HOM05D000030 ORTHO05D000009 1.9e-07 61.6 211 27.0
Manes.16G014950 Manihot esculenta HOM05D000030 ORTHO05D000009 1.9e-07 61.6 211 27.5
EL10Ac6g14430 Beta vulgaris HOM05D000030 ORTHO05D000009 2.5e-07 61.2 212 27.8
SHI34247 Sapria himalayana HOM05D000030 ORTHO05D000009 2.5e-07 61.2 230 24.8
FvH4_2g03790 Fragaria vesca HOM05D000030 ORTHO05D000009 3.2e-07 60.8 225 26.2
FvH4_5g24030 Fragaria vesca HOM05D000030 ORTHO05D000009 3.2e-07 60.8 214 25.7
MapolyY_B0042 Marchantia polymorpha HOM05D000030 ORTHO05D000009 3.2e-07 60.8 214 24.8
Manes.16G038752 Manihot esculenta HOM05D000030 ORTHO05D000009 4.2e-07 60.5 212 25.9
Manes.16G104301 Manihot esculenta HOM05D000030 ORTHO05D000009 4.2e-07 60.5 211 28.9
Manes.13G119650 Manihot esculenta HOM05D000030 ORTHO05D000009 5.5e-07 60.1 211 28.4
PSO339G1356 Papaver somniferum HOM05D000030 ORTHO05D000009 5.5e-07 60.1 221 27.1
Gorai.001G170000 Gossypium raimondii HOM05D000030 ORTHO05D000009 7.1e-07 59.7 176 25.6
PSO173G0030 Papaver somniferum HOM05D000030 ORTHO05D000009 7.1e-07 59.7 237 27.4
Manes.14G165250 Manihot esculenta HOM05D000030 ORTHO05D000009 9.3e-07 59.3 178 28.7
Mapoly0001s0180 Marchantia polymorpha HOM05D000030 ORTHO05D000009 9.3e-07 59.3 216 25.0
TWI32G0039 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 9.3e-07 59.3 213 24.4
Atru.chr6.1301 Acer truncatum HOM05D000030 ORTHO05D000009 1.2e-06 58.9 221 25.8
Manes.08G092411 Manihot esculenta HOM05D000030 ORTHO05D000009 1.2e-06 58.9 211 28.4
Manes.13G082916 Manihot esculenta HOM05D000030 ORTHO05D000009 1.2e-06 58.9 195 27.2
PSO063G5687 Papaver somniferum HOM05D000030 ORTHO05D000009 1.2e-06 58.9 213 24.9
PSO210G2443 Papaver somniferum HOM05D000030 ORTHO05D000009 1.2e-06 58.9 213 24.9
PSO210G5527 Papaver somniferum HOM05D000030 ORTHO05D000009 1.2e-06 58.9 213 24.9
SHI15401 Sapria himalayana HOM05D000030 ORTHO05D000009 1.2e-06 58.9 205 24.9
AUR62042255 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.6e-06 58.5 210 27.1
FvH4_7g14271 Fragaria vesca HOM05D000030 ORTHO05D000009 1.6e-06 58.5 214 25.2
Manes.02G223166 Manihot esculenta HOM05D000030 ORTHO05D000009 1.6e-06 58.5 211 28.4
Manes.12G071950 Manihot esculenta HOM05D000030 ORTHO05D000009 1.6e-06 58.5 211 28.4
Manes.18G145766 Manihot esculenta HOM05D000030 ORTHO05D000009 1.6e-06 58.5 210 26.7
Mapoly0061s0079 Marchantia polymorpha HOM05D000030 ORTHO05D000009 1.6e-06 58.5 214 24.3
MELO3C034410.2 Cucumis melo HOM05D000030 ORTHO05D000009 2.1e-06 58.2 209 25.4
Gorai.005G104500 Gossypium raimondii HOM05D000030 ORTHO05D000009 2.1e-06 58.2 219 23.3
Manes.02G223133 Manihot esculenta HOM05D000030 ORTHO05D000009 2.1e-06 58.2 211 28.4
Atru.chr5.2284 Acer truncatum HOM05D000030 ORTHO05D000009 2.7e-06 57.8 174 26.4
Gorai.007G156600 Gossypium raimondii HOM05D000030 ORTHO05D000009 2.7e-06 57.8 223 25.6
Hma1.2p1_2681F.1_g326860 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.7e-06 57.8 214 27.1
Manes.02G168901 Manihot esculenta HOM05D000030 ORTHO05D000009 2.7e-06 57.8 211 27.5
SHI24402 Sapria himalayana HOM05D000030 ORTHO05D000009 2.7e-06 57.8 187 24.6
PSO782G4521 Papaver somniferum HOM05D000030 ORTHO05D000009 3.5e-06 57.4 211 24.6
PSO832G3701 Papaver somniferum HOM05D000030 ORTHO05D000009 3.5e-06 57.4 213 24.9
RcHm_v2.0_Chr2g0138151 Rosa chinensis HOM05D000030 ORTHO05D000009 3.5e-06 57.4 270 24.4
RcHm_v2.0_Chr5g0038441 Rosa chinensis HOM05D000030 ORTHO05D000009 3.5e-06 57.4 216 26.4
Oeu018575.1 Olea europaea HOM05D000030 ORTHO05D000009 4.6e-06 57.0 215 27.0
RcHm_v2.0_Chr3g0496331 Rosa chinensis HOM05D000030 ORTHO05D000009 6.0e-06 56.6 213 26.8
Sed0007499 Sechium edule HOM05D000030 ORTHO05D000009 6.0e-06 56.6 206 26.2
Manes.02G217650 Manihot esculenta HOM05D000030 ORTHO05D000009 7.9e-06 56.2 211 28.0
Sopen03g023750 Solanum pennellii HOM05D000030 ORTHO05D000009 7.9e-06 56.2 211 27.0
Sopen12g016160 Solanum pennellii HOM05D000030 ORTHO05D000009 7.9e-06 56.2 211 27.0


User provided reference genes

Program Settings