Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0057s0043 Marchantia polymorpha HOM05D003215 ORTHO05D003735 0.0e+00 1962.6 1043 100.0
Mapoly0158s0003 Marchantia polymorpha HOM05D003215 ORTHO05D003735 6.5e-37 160.6 243 37.4
Pp3c4_2120 Physcomitrium patens HOM05D003215 ORTHO05D003735 3.9e-34 151.4 256 35.2
Mapoly0091s0012 Marchantia polymorpha HOM05D003215 ORTHO05D003735 1.2e-30 139.8 253 31.2
AagrBONN_evm.TU.Sc2ySwM_344.2899 Anthoceros agrestis HOM05D003215 ORTHO05D003735 3.0e-26 125.2 248 31.9
Hma1.2p1_0892F.1_g233410 Hydrangea macrophylla HOM05D003215 ORTHO05D003735 1.6e-24 119.4 247 32.0
TPR.G16275 Trifolium pratense HOM05D003215 ORTHO05D003735 2.2e-24 119.0 207 31.9
AUR62027593 Chenopodium quinoa HOM05D003215 ORTHO05D003735 1.1e-23 116.7 319 27.3
Psat4g091440 Pisum sativum HOM05D003215 ORTHO05D003735 1.8e-23 115.9 199 32.7
Lalb_Chr01g0022221 Lupinus albus HOM05D003215 ORTHO05D003735 3.1e-23 115.2 207 33.3
Ca_14134_v3 Cicer arietinum L. HOM05D003215 ORTHO05D003735 4.1e-23 114.8 207 32.4
Lj1g0005602 Lotus japonicus HOM05D003215 ORTHO05D003735 6.9e-23 114.0 220 33.2
HanXRQChr10g0309901 Helianthus annuus HOM05D003215 ORTHO05D003735 9.1e-23 113.6 199 31.2
Glyma.13G128500 Glycine max HOM05D003215 ORTHO05D003735 2.0e-22 112.5 216 31.5
PGSC0003DMG400015274 Solanum tuberosum HOM05D003215 ORTHO05D003735 7.7e-22 110.5 378 27.5
TWI18G1003 Tripterygium wilfordii HOM05D003215 ORTHO05D003735 7.7e-22 110.5 257 29.2
AUR62030249 Chenopodium quinoa HOM05D003215 ORTHO05D003735 1.0e-21 110.2 469 23.9
LjContig00081g0004985 Lotus japonicus HOM05D003215 ORTHO05D003735 1.0e-21 110.2 319 27.9
EL10As2g23156 Beta vulgaris HOM05D003215 ORTHO05D003735 1.3e-21 109.8 255 29.8
Dinv29349 Davidia involucrata HOM05D003215 ORTHO05D003735 1.3e-21 109.8 251 31.1
Sopen03g029820 Solanum pennellii HOM05D003215 ORTHO05D003735 1.3e-21 109.8 381 27.0
EL10Ac1g02277 Beta vulgaris HOM05D003215 ORTHO05D003735 1.7e-21 109.4 303 27.4
SalBow6G4532 Salvia bowleyana HOM05D003215 ORTHO05D003735 1.7e-21 109.4 260 28.5
SGA_v2.0_scaffold124G33628 Striga asiatica HOM05D003215 ORTHO05D003735 1.7e-21 109.4 257 28.4
Peaxi162Scf00029g00131 Petunia axillaris HOM05D003215 ORTHO05D003735 2.2e-21 109.0 272 29.8
Nitab4.5_0000712g0020 Nicotiana tabacum HOM05D003215 ORTHO05D003735 2.9e-21 108.6 246 30.9
Nitab4.5_0000185g0040 Nicotiana tabacum HOM05D003215 ORTHO05D003735 5.0e-21 107.8 267 28.5
Lj3g0014709 Lotus japonicus HOM05D003215 ORTHO05D003735 6.5e-21 107.5 297 28.6
Phvul.007G154900 Phaseolus vulgaris HOM05D003215 ORTHO05D003735 6.5e-21 107.5 285 29.5
SGA_v2.0_scaffold114G31828 Striga asiatica HOM05D003215 ORTHO05D003735 6.5e-21 107.5 216 28.2
Aa31LG9G750 Aethionema arabicum HOM05D003215 ORTHO05D003735 8.5e-21 107.1 200 31.5
Eucgr.H02514 Eucalyptus grandis HOM05D003215 ORTHO05D003735 8.5e-21 107.1 249 30.9
Psat1g024480 Pisum sativum HOM05D003215 ORTHO05D003735 8.5e-21 107.1 199 31.2
Atru.chr3.3572 Acer truncatum HOM05D003215 ORTHO05D003735 1.1e-20 106.7 198 34.3
MSTRG.4371 Avicennia marina HOM05D003215 ORTHO05D003735 1.1e-20 106.7 247 28.7
Nn7g37196 Nelumbo nucifera HOM05D003215 ORTHO05D003735 1.1e-20 106.7 336 25.3
Cpa.g.sc65.22 Carica papaya HOM05D003215 ORTHO05D003735 1.4e-20 106.3 210 28.6
Solyc08g066190.2 Solanum lycopersicum HOM05D003215 ORTHO05D003735 1.4e-20 106.3 252 29.8
TPR.G20272 Trifolium pratense HOM05D003215 ORTHO05D003735 1.4e-20 106.3 159 34.6
Cc11_g08560 Coffea canephora HOM05D003215 ORTHO05D003735 1.9e-20 105.9 260 28.8
QL05p019413 Quercus lobata HOM05D003215 ORTHO05D003735 4.2e-20 104.8 207 29.5
QL09p047318 Quercus lobata HOM05D003215 ORTHO05D003735 4.2e-20 104.8 207 29.5
Haze_21721 Corylus avellana HOM05D003215 ORTHO05D003735 5.5e-20 104.4 244 27.9
Peaxi162Scf01390g00031 Petunia axillaris HOM05D001168 ORTHO05D003735 5.5e-20 104.4 248 29.0
Sopen08g019870 Solanum pennellii HOM05D003215 ORTHO05D003735 5.5e-20 104.4 253 30.4
Nitab4.5_0000712g0040 Nicotiana tabacum HOM05D003215 ORTHO05D003735 7.2e-20 104.0 263 28.5
Actinidia34779 Actinidia chinensis HOM05D003215 ORTHO05D003735 9.4e-20 103.6 358 26.5
BcaB06g27584 Brassica carinata HOM05D003215 ORTHO05D003735 9.4e-20 103.6 240 29.6
Lj4C665T1 Lonicera japonica HOM05D003215 ORTHO05D003735 9.4e-20 103.6 372 26.1
Lj4C675G2 Lonicera japonica HOM05D003215 ORTHO05D003735 9.4e-20 103.6 218 28.4
Peaxi162Scf01390g00030 Petunia axillaris HOM05D003215 ORTHO05D003735 9.4e-20 103.6 248 29.0
Sc24g0002070 Simmondsia chinensis HOM05D003215 ORTHO05D003735 9.4e-20 103.6 284 28.2
PGSC0003DMG400011852 Solanum tuberosum HOM05D003215 ORTHO05D003735 9.4e-20 103.6 371 25.9
Ciclev10030284m.g Citrus clementina HOM05D003215 ORTHO05D003735 1.6e-19 102.8 310 26.5
Nitab4.5_0000712g0010 Nicotiana tabacum HOM05D003215 ORTHO05D003735 1.6e-19 102.8 250 28.0
unitig_52.g17692 Utricularia gibba HOM05D003215 ORTHO05D003735 1.6e-19 102.8 218 30.3
CiPaw.11G100100 Carya illinoinensis HOM05D003215 ORTHO05D003735 2.1e-19 102.4 207 30.0
SHI08388 Sapria himalayana HOM05D003215 ORTHO05D003735 2.1e-19 102.4 207 30.0
Sp7g00890 Schrenkiella parvula HOM05D003215 ORTHO05D003735 2.1e-19 102.4 237 29.5
CANSAT54G0322 Cannabis sativa HOM05D003215 ORTHO05D003735 2.7e-19 102.1 305 26.9
Ciclev10014556m.g Citrus clementina HOM05D003215 ORTHO05D003735 2.7e-19 102.1 326 28.5
Carub.0007s3447 Capsella rubella HOM05D003215 ORTHO05D003735 3.6e-19 101.7 267 26.6
Sopen08g003240 Solanum pennellii HOM05D003215 ORTHO05D003735 3.6e-19 101.7 250 28.8
TWI31G0331 Tripterygium wilfordii HOM05D003215 ORTHO05D003735 4.6e-19 101.3 207 30.0
PGR083G2356 Punica granatum HOM05D003215 ORTHO05D003735 6.1e-19 100.9 199 29.1
arahy.Tifrunner.gnm1.ann1.7W7N8S Arachis hypogaea HOM05D003215 ORTHO05D003735 7.9e-19 100.5 217 28.1
BcaB06g26361 Brassica carinata HOM05D003215 ORTHO05D003735 1.0e-18 100.1 199 29.1
BolC4t26400H Brassica oleracea HOM05D003215 ORTHO05D003735 1.0e-18 100.1 240 29.2
Solyc08g007300.3 Solanum lycopersicum HOM05D003215 ORTHO05D003735 1.0e-18 100.1 250 28.4
BcaC02g08984 Brassica carinata HOM05D003215 ORTHO05D003735 1.8e-18 99.4 205 30.2
Lsat_1_v5_gn_7_104201 Lactuca sativa HOM05D003215 ORTHO05D003735 1.8e-18 99.4 199 28.6
vmacro10400 Vaccinium macrocarpon HOM05D003215 ORTHO05D003735 1.8e-18 99.4 261 28.0
Nitab4.5_0000185g0060 Nicotiana tabacum HOM05D003215 ORTHO05D003735 3.0e-18 98.6 241 30.3
Aa31LG9G1040 Aethionema arabicum HOM05D003215 ORTHO05D003735 3.9e-18 98.2 240 32.5
Manes.04G016500 Manihot esculenta HOM05D003215 ORTHO05D003735 5.1e-18 97.8 201 28.9
A04p14060 Brassica napus HOM05D003215 ORTHO05D003735 6.7e-18 97.4 205 29.8
MELO3C006154.2 Cucumis melo HOM05D003215 ORTHO05D003735 6.7e-18 97.4 199 29.1
MD04G1037700 Malus domestica HOM05D003215 ORTHO05D003735 6.7e-18 97.4 205 30.2
Potri.015G095000 Populus trichocarpa HOM05D003215 ORTHO05D003735 6.7e-18 97.4 210 28.6
TWI31G0413 Tripterygium wilfordii HOM05D003215 ORTHO05D003735 6.7e-18 97.4 258 27.9
BraA04t17067Z Brassica rapa HOM05D003215 ORTHO05D003735 1.1e-17 96.7 247 26.7
Cfa013261 Carpinus fangiana HOM05D003215 ORTHO05D003735 2.0e-17 95.9 244 27.0
Thhalv10027663m.g Eutrema salsugineum HOM05D003215 ORTHO05D003735 2.0e-17 95.9 241 26.6
FAN16G3289 Fragaria x ananassa HOM05D003215 ORTHO05D003735 2.0e-17 95.9 359 28.4
MBI05_g27786_MAGBIO Magnolia biondii HOM05D003215 ORTHO05D003735 2.6e-17 95.5 236 27.1
THA.LOC104816721 Tarenaya hassleriana HOM05D003215 ORTHO05D003735 2.6e-17 95.5 260 26.2
C04p48090 Brassica napus HOM05D003215 ORTHO05D003735 3.3e-17 95.1 230 29.1
CsaV3_3G009340 Cucumis sativus L. HOM05D003215 ORTHO05D003735 3.3e-17 95.1 199 28.6
Gorai.013G268300 Gossypium raimondii HOM05D003215 ORTHO05D003735 3.3e-17 95.1 207 28.0
PSO170G2126 Papaver somniferum HOM05D003215 ORTHO05D003735 4.4e-17 94.7 276 27.5
Sed0005911 Sechium edule HOM05D003215 ORTHO05D003735 4.4e-17 94.7 199 29.1
FAN11G0613 Fragaria x ananassa HOM05D003215 ORTHO05D003735 5.7e-17 94.4 252 29.4
Atru.chr3.3575 Acer truncatum HOM05D003215 ORTHO05D003735 7.4e-17 94.0 207 29.5
Oeu046322.1 Olea europaea HOM05D003215 ORTHO05D003735 9.7e-17 93.6 423 23.9
CiPaw.15G124500 Carya illinoinensis HOM05D003215 ORTHO05D003735 1.3e-16 93.2 207 28.5
ClCG05G001940 Citrullus lanatus HOM05D003215 ORTHO05D003735 1.3e-16 93.2 199 28.1
FvH4_3g31460 Fragaria vesca HOM05D003215 ORTHO05D003735 1.3e-16 93.2 358 27.7
CSS0012061 Camellia sinensis var. sinensis HOM05D003215 ORTHO05D003735 3.7e-16 91.7 467 24.2
FAN21G3495 Fragaria x ananassa HOM05D003215 ORTHO05D003735 3.7e-16 91.7 358 26.8
Manes.11G149200 Manihot esculenta HOM05D003215 ORTHO05D003735 6.3e-16 90.9 482 25.3
RcHm_v2.0_Chr5g0058161 Rosa chinensis HOM05D003215 ORTHO05D003735 1.1e-15 90.1 252 28.6
Sabra03G0123800 Salix brachista HOM05D003215 ORTHO05D003735 1.1e-15 90.1 210 28.1
CDE11G0705 Ceratophyllum demersum HOM05D003215 ORTHO05D003735 1.4e-15 89.7 382 23.0
THA.LOC104815051 Tarenaya hassleriana HOM05D003215 ORTHO05D003735 1.4e-15 89.7 218 26.1
THA.LOC104815151 Tarenaya hassleriana HOM05D003215 ORTHO05D003735 1.4e-15 89.7 218 26.1
Atru.chr3.3574 Acer truncatum HOM05D003215 ORTHO05D003735 9.1e-15 87.0 207 28.5
Potri.003G168900 Populus trichocarpa HOM05D003215 ORTHO05D003735 9.1e-15 87.0 458 23.1
BcaC09g51256 Brassica carinata HOM05D003215 ORTHO05D003735 1.5e-14 86.3 199 27.1
Zm00001eb172100 Zea mays HOM05D003215 ORTHO05D003735 1.5e-14 86.3 443 22.8
Aa31LG9G1030 Aethionema arabicum HOM05D003215 ORTHO05D003735 3.4e-14 85.1 223 29.1
Medtr8g077990 Medicago truncatula HOM05D003215 ORTHO05D003735 4.5e-14 84.7 207 27.5
Gohir.A13G231900 Gossypium hirsutum HOM05D003215 ORTHO05D003735 2.9e-13 82.0 181 27.1
PSO210G4587 Papaver somniferum HOM05D003215 ORTHO05D003735 1.4e-12 79.7 299 24.7
PSO357G0671 Papaver somniferum HOM05D003215 ORTHO05D003735 2.5e-12 79.0 144 33.3
PSO675G7906 Papaver somniferum HOM05D003215 ORTHO05D003735 2.5e-12 79.0 194 27.3
Peaxi162Scf25743g00028 Petunia axillaris HOM05D003215 ORTHO05D003735 2.5e-12 79.0 242 24.8
TPR.G12921 Trifolium pratense HOM05D003215 ORTHO05D003735 5.5e-12 77.8 139 32.4
Peaxi162Scf25743g00024 Petunia axillaris HOM05D003215 ORTHO05D003735 1.2e-11 76.6 245 24.5
Os06g0303700 Oryza sativa ssp. japonica HOM05D003215 ORTHO05D003735 4.7e-11 74.7 145 29.7
Haze_25499 Corylus avellana HOM05D003215 ORTHO05D003735 1.0e-10 73.6 148 31.8
Peaxi162Scf00102g01055 Petunia axillaris HOM05D003215 ORTHO05D003735 1.0e-10 73.6 247 25.1
EL10Ac6g13885 Beta vulgaris HOM05D003215 ORTHO05D003735 3.0e-10 72.0 233 25.3
Peaxi162Scf41047g00002 Petunia axillaris HOM05D003215 ORTHO05D003735 6.7e-10 70.9 183 27.3
Peaxi162Scf25743g00022 Petunia axillaris HOM05D003215 ORTHO05D003735 4.4e-09 68.2 185 28.1
Peaxi162Scf25743g00029 Petunia axillaris HOM05D003215 ORTHO05D003735 4.4e-09 68.2 185 28.1
SMO200G0149 Selaginella moellendorffii HOM05D003215 ORTHO05D003735 2.2e-08 65.9 313 25.9
BcaNung03841 Brassica carinata HOM05D003215 ORTHO05D003735 7.7e-06 57.4 74 37.8
PSO210G4767 Papaver somniferum HOM05D003215 ORTHO05D003735 7.7e-06 57.4 117 31.6


User provided reference genes

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