Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0056s0112 Marchantia polymorpha HOM05D004897 ORTHO05D005928 0.0e+00 1511.9 884 100.0
Pp3c2_5550 Physcomitrium patens HOM05D004897 ORTHO05D005928 7.6e-63 246.5 858 33.4
AagrBONN_evm.TU.Sc2ySwM_344.4779 Anthoceros agrestis HOM05D004897 ORTHO05D005928 8.7e-59 233.0 856 34.2
Hma1.2p1_0669F.1_g200180 Hydrangea macrophylla HOM05D004897 ORTHO05D005928 7.4e-42 176.8 365 37.0
Nn4g24194 Nelumbo nucifera HOM05D004897 ORTHO05D005928 3.7e-41 174.5 365 38.1
Gohir.A12G268700 Gossypium hirsutum HOM05D004897 ORTHO05D005928 6.2e-41 173.7 358 37.4
Actinidia18901 Actinidia chinensis HOM05D004897 ORTHO05D005928 1.1e-40 172.9 360 37.5
Ciclev10007731m.g Citrus clementina HOM05D004897 ORTHO05D005928 4.0e-40 171.0 356 37.9
Aqoxy3G00106 Aquilegia oxysepala HOM05D004897 ORTHO05D005928 9.0e-40 169.9 366 39.1
Gohir.D12G269100 Gossypium hirsutum HOM05D004897 ORTHO05D005928 9.0e-40 169.9 355 37.5
Duzib084G0246 Durio zibethinus HOM05D004897 ORTHO05D005928 1.5e-39 169.1 357 37.5
Medtr8g107060 Medicago truncatula HOM05D004897 ORTHO05D005928 3.4e-39 167.9 365 37.3
Eucgr.B00942 Eucalyptus grandis HOM05D004897 ORTHO05D005928 4.5e-39 167.5 362 35.4
PSO017G1741 Papaver somniferum HOM05D004897 ORTHO05D005928 1.0e-38 166.4 350 38.3
MBI12_g30398_MAGBIO Magnolia biondii HOM05D004897 ORTHO05D005928 1.3e-38 166.0 370 36.8
THA.LOC104812165 Tarenaya hassleriana HOM05D004897 ORTHO05D005928 1.3e-38 166.0 346 37.6
Oeu014377.2 Olea europaea HOM05D004897 ORTHO05D005928 1.7e-38 165.6 365 35.9
CAN.G1129.49 Capsicum annuum HOM05D004897 ORTHO05D005928 2.2e-38 165.2 364 37.9
Migut.D01558 Erythranthe guttata HOM05D004897 ORTHO05D005928 2.9e-38 164.9 366 36.3
QL10p028331 Quercus lobata HOM05D004897 ORTHO05D005928 2.9e-38 164.9 355 35.5
ECA233G2541 Erigeron canadensis HOM05D004897 ORTHO05D005928 3.8e-38 164.5 365 35.1
TAR622G0961 Trochodendron aralioides HOM05D004897 ORTHO05D005928 3.8e-38 164.5 365 35.9
QL10p028216 Quercus lobata HOM05D004897 ORTHO05D005928 4.9e-38 164.1 352 35.2
ClCG06G014390 Citrullus lanatus HOM05D004897 ORTHO05D005928 6.5e-38 163.7 391 35.0
Glyma.05G244800 Glycine max HOM05D004897 ORTHO05D005928 6.5e-38 163.7 364 36.3
Glyma.08G053300 Glycine max HOM05D004897 ORTHO05D005928 8.4e-38 163.3 364 36.8
CSS0030961 Camellia sinensis var. sinensis HOM05D004897 ORTHO05D005928 1.1e-37 162.9 343 36.4
CiPaw.15G140900 Carya illinoinensis HOM05D004897 ORTHO05D005928 2.5e-37 161.8 360 35.0
DCAR_014009 Daucus carota HOM05D004897 ORTHO05D005928 3.2e-37 161.4 357 35.9
Prupe.5G232100 Prunus persica HOM05D004897 ORTHO05D005928 3.2e-37 161.4 363 36.4
PGSC0003DMG400005743 Solanum tuberosum HOM05D004897 ORTHO05D005928 3.2e-37 161.4 363 37.2
Thecc.03G053700 Theobroma cacao HOM05D004897 ORTHO05D005928 4.2e-37 161.0 356 37.6
TWI60G0918 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 4.2e-37 161.0 361 36.8
Psat7g002120 Pisum sativum HOM05D004897 ORTHO05D005928 5.5e-37 160.6 363 36.6
Actinidia35124 Actinidia chinensis HOM05D004897 ORTHO05D005928 7.1e-37 160.2 377 36.6
arahy.Tifrunner.gnm1.ann1.Y8NJDB Arachis hypogaea HOM05D004897 ORTHO05D005928 7.1e-37 160.2 344 36.6
Dinv18253 Davidia involucrata HOM05D004897 ORTHO05D005928 7.1e-37 160.2 361 35.2
BcaB07g31825 Brassica carinata HOM05D004897 ORTHO05D005928 9.3e-37 159.8 350 36.0
PSO478G0546 Papaver somniferum HOM05D004897 ORTHO05D005928 9.3e-37 159.8 350 37.4
TWI81G0456 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 1.2e-36 159.5 367 36.8
Gohir.A09G175700 Gossypium hirsutum HOM05D004897 ORTHO05D005928 1.6e-36 159.1 354 38.1
Sabra15G0057300 Salix brachista HOM05D004897 ORTHO05D005928 2.1e-36 158.7 366 35.0
arahy.Tifrunner.gnm1.ann1.QTT902 Arachis hypogaea HOM05D004897 ORTHO05D005928 2.7e-36 158.3 344 36.3
VMungo0251G1788 Vigna mungo HOM05D004897 ORTHO05D005928 2.7e-36 158.3 364 36.3
Cfa019677 Carpinus fangiana HOM05D004897 ORTHO05D005928 3.5e-36 157.9 383 34.2
MD14G1235400 Malus domestica HOM05D004897 ORTHO05D005928 4.6e-36 157.5 364 35.2
Potri.015G039800 Populus trichocarpa HOM05D004897 ORTHO05D005928 4.6e-36 157.5 360 35.3
C05p16500 Brassica napus HOM05D004897 ORTHO05D005928 6.0e-36 157.1 341 37.5
Thhalv10007004m.g Eutrema salsugineum HOM05D004897 ORTHO05D005928 7.9e-36 156.8 347 37.2
Sp1g16170 Schrenkiella parvula HOM05D004897 ORTHO05D005928 1.0e-35 156.4 356 35.4
AT1G18190 Arabidopsis thaliana HOM05D004897 ORTHO05D005928 1.3e-35 156.0 353 35.4
Rhsim12G0138900 Rhododendron simsii HOM05D004897 ORTHO05D005928 1.3e-35 156.0 360 35.6
BcaC05g25714 Brassica carinata HOM05D004897 ORTHO05D005928 1.8e-35 155.6 348 37.6
BolC5t30347H Brassica oleracea HOM05D004897 ORTHO05D005928 1.8e-35 155.6 348 37.6
BraA06t24553Z Brassica rapa HOM05D004897 ORTHO05D005928 1.8e-35 155.6 341 37.2
Lj9C421G3 Lonicera japonica HOM05D004897 ORTHO05D005928 1.8e-35 155.6 347 36.6
Ah.11g045250 Amaranthus hybridus HOM05D004897 ORTHO05D005928 2.3e-35 155.2 346 34.4
Lalb_Chr16g0387081 Lupinus albus HOM05D004897 ORTHO05D005928 3.9e-35 154.5 367 36.0
Sed0018128 Sechium edule HOM05D004897 ORTHO05D005928 3.9e-35 154.5 383 34.7
Cc04_g06380 Coffea canephora HOM05D004897 ORTHO05D005928 5.1e-35 154.1 366 34.7
AL1G30560 Arabidopsis lyrata HOM05D004897 ORTHO05D005928 8.7e-35 153.3 343 35.0
COL.COLO4_16135 Corchorus olitorius HOM05D004897 ORTHO05D005928 1.5e-34 152.5 361 35.2
Lalb_Chr05g0221751 Lupinus albus HOM05D004897 ORTHO05D005928 1.5e-34 152.5 364 34.6
HPP92_013368 Vanilla planifolia HOM05D004897 ORTHO05D005928 1.9e-34 152.1 398 34.2
CDE05G2998 Ceratophyllum demersum HOM05D004897 ORTHO05D005928 2.5e-34 151.8 362 34.8
Lj4g0010445 Lotus japonicus HOM05D004897 ORTHO05D005928 2.5e-34 151.8 360 35.3
A06p14220 Brassica napus HOM05D004897 ORTHO05D005928 3.3e-34 151.4 341 37.2
SalBow1G4576 Salvia bowleyana HOM05D004897 ORTHO05D005928 7.4e-34 150.2 357 35.6
A08p30510 Brassica napus HOM05D004897 ORTHO05D005928 2.2e-33 148.7 357 33.9
Lsat_1_v5_gn_8_144040 Lactuca sativa HOM05D004897 ORTHO05D005928 3.7e-33 147.9 354 36.2
MSTRG.4571 Avicennia marina HOM05D004897 ORTHO05D005928 4.8e-33 147.5 365 34.8
Manes.14G170400 Manihot esculenta HOM05D004897 ORTHO05D005928 6.3e-33 147.1 359 34.5
SEGI_33031 Sequoiadendron giganteum HOM05D004897 ORTHO05D005928 1.4e-32 146.0 252 40.1
Ca_17200_v3 Cicer arietinum L. HOM05D004897 ORTHO05D005928 1.8e-32 145.6 360 34.2
HanXRQChr08g0227441 Helianthus annuus HOM05D004897 ORTHO05D005928 3.1e-32 144.8 352 35.2
Sc10g0009320 Simmondsia chinensis HOM05D004897 ORTHO05D005928 5.3e-32 144.1 339 36.3
Nitab4.5_0006894g0040 Nicotiana tabacum HOM05D004897 ORTHO05D005928 6.9e-32 143.7 387 32.8
Hund02326 Selenicereus undatus HOM05D004897 ORTHO05D005928 6.9e-32 143.7 872 28.7
AUR62042935 Chenopodium quinoa HOM05D004897 ORTHO05D005928 9.0e-32 143.3 372 34.1
CsaV3_1G004270 Cucumis sativus L. HOM05D004897 ORTHO05D005928 2.6e-31 141.7 874 29.1
Atru.chr9.1748 Acer truncatum HOM05D004897 ORTHO05D005928 7.7e-31 140.2 357 33.6
MELO3C017351.2 Cucumis melo HOM05D004897 ORTHO05D005928 7.7e-31 140.2 367 34.3
Peaxi162Scf00683g00441 Petunia axillaris HOM05D004897 ORTHO05D005928 1.0e-30 139.8 306 35.3
Gorai.008G289400 Gossypium raimondii HOM05D004897 ORTHO05D005928 2.2e-30 138.7 869 27.4
Nitab4.5_0001456g0120 Nicotiana tabacum HOM05D004897 ORTHO05D005928 2.2e-30 138.7 386 32.9
BcaC07g38902 Brassica carinata HOM05D004897 ORTHO05D005928 1.4e-29 136.0 333 33.3
BraA08t34983Z Brassica rapa HOM05D004897 ORTHO05D005928 4.2e-29 134.4 333 32.4
FAN04G2242 Fragaria x ananassa HOM05D004897 ORTHO05D005928 7.2e-29 133.7 574 28.0
C08p18450 Brassica napus HOM05D004897 ORTHO05D005928 9.4e-29 133.3 338 32.5
Aa31LG7G2880 Aethionema arabicum HOM05D004897 ORTHO05D005928 1.2e-28 132.9 891 27.7
MD06G1230800 Malus domestica HOM05D004897 ORTHO05D005928 1.2e-28 132.9 871 27.8
Haze_18817 Corylus avellana HOM05D004897 ORTHO05D005928 2.1e-28 132.1 422 30.1
Cpa.g.sc3.408 Carica papaya HOM05D004897 ORTHO05D005928 2.7e-28 131.7 246 40.2
Phvul.002G329100 Phaseolus vulgaris HOM05D004897 ORTHO05D005928 2.7e-28 131.7 871 27.8
Carub.0001s1783 Capsella rubella HOM05D004897 ORTHO05D005928 3.9e-27 127.9 855 27.4
FAN18G0124 Fragaria x ananassa HOM05D004897 ORTHO05D005928 1.5e-26 125.9 709 25.8
TPR.G1406 Trifolium pratense HOM05D004897 ORTHO05D005928 1.5e-26 125.9 328 34.8
FAN13G1819 Fragaria x ananassa HOM05D004897 ORTHO05D005928 2.0e-26 125.6 695 25.8
RcHm_v2.0_Chr7g0178571 Rosa chinensis HOM05D004897 ORTHO05D005928 4.3e-26 124.4 864 25.0
Sed0002019 Sechium edule HOM05D004897 ORTHO05D005928 1.3e-25 122.9 889 27.0
Os04g0652500 Oryza sativa ssp. japonica HOM05D004897 ORTHO05D005928 2.2e-25 122.1 312 32.7
SGA_v2.0_scaffold168G38498 Striga asiatica HOM05D004897 ORTHO05D005928 1.8e-24 119.0 871 28.1
Zm00001eb068130 Zea mays HOM05D004897 ORTHO05D005928 4.1e-24 117.9 245 37.1
FAN08G3076 Fragaria x ananassa HOM05D004897 ORTHO05D005928 2.0e-23 115.5 866 27.4
GSVIVG01008417001 Vitis vinifera HOM05D004897 ORTHO05D005928 2.9e-22 111.7 226 36.7
BcaNung05436 Brassica carinata HOM05D004897 ORTHO05D005928 6.5e-22 110.5 314 31.5
Dinv10174 Davidia involucrata HOM05D004897 ORTHO05D005928 1.4e-21 109.4 202 38.6
vmacro16414 Vaccinium macrocarpon HOM05D004897 ORTHO05D005928 3.9e-19 101.3 521 25.9
CARHR018760 Cardamine hirsuta HOM05D004897 ORTHO05D005928 1.1e-18 99.8 254 31.1
PGR083G0946 Punica granatum HOM05D004897 ORTHO05D005928 5.7e-18 97.4 859 25.1
ATR1102G018 Amborella trichopoda HOM05D004897 ORTHO05D005928 7.4e-18 97.1 235 31.5
FvH4_5g17221 Fragaria vesca HOM05D004897 ORTHO05D005928 7.0e-16 90.5 221 35.3
GSVIVG01008418001 Vitis vinifera HOM05D004897 ORTHO05D005928 9.1e-16 90.1 114 50.0
BolC8t49476H Brassica oleracea HOM05D004897 ORTHO05D005928 2.6e-15 88.6 292 28.8
Gohir.D09G170550 Gossypium hirsutum HOM05D004897 ORTHO05D005928 2.6e-15 88.6 164 34.8
Gorai.006G192100 Gossypium raimondii HOM05D004897 ORTHO05D005928 2.6e-15 88.6 164 34.8
Zm00001eb072950 Zea mays HOM05D004897 ORTHO05D005928 4.7e-12 77.8 104 48.1
BcaB03g12969 Brassica carinata HOM05D004897 ORTHO05D005928 5.2e-11 74.3 267 28.8
SMO269G0021 Selaginella moellendorffii HOM05D004897 ORTHO05D005928 1.1e-10 73.2 227 36.6
CARHR018770 Cardamine hirsuta HOM05D004897 ORTHO05D005928 2.2e-09 68.9 91 49.5
unitig_0.g806 Utricularia gibba HOM05D004897 ORTHO05D005928 1.1e-08 66.6 193 28.5
ATR1102G065 Amborella trichopoda HOM05D004897 ORTHO05D005928 9.1e-08 63.5 631 27.7
CDE05G0958 Ceratophyllum demersum HOM05D004897 ORTHO05D005928 1.3e-06 59.7 102 46.1
Ca_25562_v3 Cicer arietinum L. HOM05D004485 ORTHO05D005485 1.3e-06 59.7 239 28.0
Zm00001eb382330 Zea mays HOM05D004897 ORTHO05D005928 2.2e-06 58.9 71 49.3
Oeu041185.1 Olea europaea HOM05D004897 ORTHO05D005928 3.8e-06 58.2 120 40.0


User provided reference genes

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