Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0056s0109 Marchantia polymorpha HOM05D007038 ORTHO05D008893 6.4e-137 490.7 246 100.0
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 7.9e-18 95.1 239 29.3
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 9.6e-16 88.2 209 26.8
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 2.6e-13 80.1 215 25.6
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 3.4e-13 79.7 174 27.6
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 3.4e-13 79.7 215 26.0
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 5.8e-13 79.0 213 25.4
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 2.2e-12 77.0 208 25.5
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 2.9e-12 76.6 215 25.6
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 6.4e-12 75.5 212 25.5
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 8.4e-12 75.1 200 24.5
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 8.4e-12 75.1 233 24.0
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 3.2e-11 73.2 209 23.9
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 4.2e-11 72.8 152 26.3
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 7.1e-11 72.0 210 25.2
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 7.1e-11 72.0 212 23.1
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 9.3e-11 71.6 224 24.6
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 9.3e-11 71.6 216 22.7
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 1.2e-10 71.2 209 23.9
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 1.6e-10 70.9 216 23.6
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 3.5e-10 69.7 216 23.1
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 3.5e-10 69.7 119 29.4
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 3.5e-10 69.7 230 23.0
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 7.9e-10 68.6 214 23.8
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 1.0e-09 68.2 213 24.9
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 1.0e-09 68.2 211 26.1
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 1.3e-09 67.8 208 22.1
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 2.3e-09 67.0 202 22.8
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 2.3e-09 67.0 200 22.5
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 3.9e-09 66.2 232 23.3
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 5.1e-09 65.9 209 23.4
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 6.7e-09 65.5 184 25.5
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 6.7e-09 65.5 152 25.7
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 1.1e-08 64.7 225 19.6
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 6.2e-07 58.9 240 20.8
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 1.1e-06 58.2 165 24.8
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 1.1e-06 58.2 165 24.8
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 1.1e-06 58.2 225 23.1
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 4.0e-06 56.2 148 24.3
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 6.9e-06 55.5 188 22.9
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 9.0e-06 55.1 115 25.2


User provided reference genes

Program Settings