Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0055s0070 Marchantia polymorpha HOM05D005517 ORTHO05D006760 5.6e-34 147.1 79 100.0
Pp3c1_33450 Physcomitrium patens HOM05D005517 ORTHO05D006760 8.4e-14 80.1 73 63.0
AagrBONN_evm.TU.Sc2ySwM_228.2988 Anthoceros agrestis HOM05D005517 ORTHO05D006760 1.4e-13 79.3 76 65.8
Duzib147G1371 Durio zibethinus HOM05D005517 ORTHO05D006760 1.4e-13 79.3 70 58.6
Duzib264G0094 Durio zibethinus HOM05D005517 ORTHO05D006760 9.3e-13 76.6 70 58.6
Thecc.04G039500 Theobroma cacao HOM05D005517 ORTHO05D006760 9.3e-13 76.6 70 58.6
Hund07167 Selenicereus undatus HOM05D005517 ORTHO05D006760 2.1e-12 75.5 77 57.1
THA.LOC104803813 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 2.7e-12 75.1 76 52.6
Duzib187G1036 Durio zibethinus HOM05D005517 ORTHO05D006760 3.5e-12 74.7 70 55.7
Thhalv10021865m.g Eutrema salsugineum HOM05D005517 ORTHO05D006760 3.5e-12 74.7 76 50.0
BcaB01g06344 Brassica carinata HOM05D005517 ORTHO05D006760 4.6e-12 74.3 76 51.3
BcaC04g19059 Brassica carinata HOM05D005517 ORTHO05D006760 4.6e-12 74.3 73 53.4
C09p63000 Brassica napus HOM05D005517 ORTHO05D006760 4.6e-12 74.3 73 53.4
BolC9t59138H Brassica oleracea HOM05D005517 ORTHO05D006760 4.6e-12 74.3 73 53.4
Ciclev10017370m.g Citrus clementina HOM05D005517 ORTHO05D006760 4.6e-12 74.3 75 54.7
TAR371G1004 Trochodendron aralioides HOM05D005517 ORTHO05D006760 4.6e-12 74.3 76 53.9
Gohir.A07G229900 Gossypium hirsutum HOM05D005517 ORTHO05D006760 6.0e-12 73.9 75 56.0
Gohir.D07G237100 Gossypium hirsutum HOM05D005517 ORTHO05D006760 6.0e-12 73.9 75 56.0
Gorai.001G273000 Gossypium raimondii HOM05D005517 ORTHO05D006760 6.0e-12 73.9 75 56.0
GSVIVG01028670001 Vitis vinifera HOM05D005517 ORTHO05D006760 6.0e-12 73.9 77 50.6
Atru.chr6.2589 Acer truncatum HOM05D005517 ORTHO05D006760 7.9e-12 73.6 73 56.2
BcaB08g36959 Brassica carinata HOM05D005517 ORTHO05D006760 7.9e-12 73.6 73 53.4
Cpa.g.sc70.124 Carica papaya HOM05D005517 ORTHO05D006760 7.9e-12 73.6 80 53.8
A10p24320 Brassica napus HOM05D005517 ORTHO05D006760 1.0e-11 73.2 73 52.1
BraA10t44498Z Brassica rapa HOM05D005517 ORTHO05D006760 1.0e-11 73.2 73 52.1
Gohir.D04G075800 Gossypium hirsutum HOM05D005517 ORTHO05D006760 1.0e-11 73.2 70 54.3
Carub.0006s1230 Capsella rubella HOM05D005517 ORTHO05D006760 1.3e-11 72.8 77 50.6
Migut.F00052 Erythranthe guttata HOM05D005517 ORTHO05D006760 1.8e-11 72.4 69 53.6
AT5G14105 Arabidopsis thaliana HOM05D005517 ORTHO05D006760 2.3e-11 72.0 77 50.6
C02p06560 Brassica napus HOM05D005517 ORTHO05D006760 2.3e-11 72.0 72 54.2
Aa31LG11G14910 Aethionema arabicum HOM05D005517 ORTHO05D006760 3.9e-11 71.2 75 50.7
BcaC03g13513 Brassica carinata HOM05D005517 ORTHO05D006760 3.9e-11 71.2 62 58.1
BcaC03g13514 Brassica carinata HOM05D005517 ORTHO05D006760 3.9e-11 71.2 74 52.7
BcaC03g13515 Brassica carinata HOM05D005517 ORTHO05D006760 3.9e-11 71.2 74 52.7
A02p02340 Brassica napus HOM05D005517 ORTHO05D006760 3.9e-11 71.2 75 50.7
BraA02t05205Z Brassica rapa HOM05D005517 ORTHO05D006760 3.9e-11 71.2 75 50.7
Os05g0517800 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 3.9e-11 71.2 76 51.3
CARHR199240 Cardamine hirsuta HOM05D005517 ORTHO05D006760 5.1e-11 70.9 76 50.0
COL.COLO4_13282 Corchorus olitorius HOM05D005517 ORTHO05D006760 5.1e-11 70.9 76 52.6
CiPaw.03G057500 Carya illinoinensis HOM05D005517 ORTHO05D006760 6.7e-11 70.5 76 51.3
PSO302G0245 Papaver somniferum HOM05D005517 ORTHO05D006760 8.7e-11 70.1 62 56.5
Potri.017G066388 Populus trichocarpa HOM05D005517 ORTHO05D006760 8.7e-11 70.1 75 49.3
BcaNung06018 Brassica carinata HOM05D005517 ORTHO05D006760 1.1e-10 69.7 74 52.7
Cc03_g13370 Coffea canephora HOM05D005517 ORTHO05D006760 1.1e-10 69.7 70 50.0
CSS0012820 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 1.5e-10 69.3 69 55.1
Glyma.16G054600 Glycine max HOM05D005517 ORTHO05D006760 1.5e-10 69.3 80 52.5
QL02p071008 Quercus lobata HOM05D005517 ORTHO05D006760 1.5e-10 69.3 63 54.0
AUR62000640 Chenopodium quinoa HOM05D005517 ORTHO05D006760 1.9e-10 68.9 62 56.5
AUR62006995 Chenopodium quinoa HOM05D005517 ORTHO05D006760 1.9e-10 68.9 62 56.5
Solyc04g009570.3 Solanum lycopersicum HOM05D005517 ORTHO05D006760 1.9e-10 68.9 69 50.7
TAR629G2363 Trochodendron aralioides HOM05D005517 ORTHO05D006760 1.9e-10 68.9 76 48.7
Aa31LG5G11080 Aethionema arabicum HOM05D005517 ORTHO05D006760 2.5e-10 68.6 77 50.6
Dinv33325 Davidia involucrata HOM05D005517 ORTHO05D006760 2.5e-10 68.6 69 49.3
Sopen04g004730 Solanum pennellii HOM05D005517 ORTHO05D006760 2.5e-10 68.6 69 50.7
PGSC0003DMG400032535 Solanum tuberosum HOM05D005517 ORTHO05D006760 2.5e-10 68.6 69 50.7
Zm00001eb293020 Zea mays HOM05D005517 ORTHO05D006760 2.5e-10 68.6 76 50.0
Hma1.2p1_1057F.1_g252720 Hydrangea macrophylla HOM05D005517 ORTHO05D006760 3.3e-10 68.2 70 48.6
Manes.15G162502 Manihot esculenta HOM05D005517 ORTHO05D006760 3.3e-10 68.2 76 47.4
MBI06_g06692_MAGBIO Magnolia biondii HOM05D005517 ORTHO05D006760 4.3e-10 67.8 75 49.3
Sabra17G0058600 Salix brachista HOM05D005517 ORTHO05D006760 4.3e-10 67.8 75 49.3
Lsat_1_v5_gn_1_29421 Lactuca sativa HOM05D005517 ORTHO05D006760 5.6e-10 67.4 69 50.7
TWI74G0054 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 5.6e-10 67.4 75 46.7
TWI74G0227 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 5.6e-10 67.4 75 46.7
Aqoxy1G01489 Aquilegia oxysepala HOM05D005517 ORTHO05D006760 7.4e-10 67.0 77 49.4
QL10p050767 Quercus lobata HOM05D005517 ORTHO05D006760 7.4e-10 67.0 75 48.0
SEGI_12962 Sequoiadendron giganteum HOM05D005517 ORTHO05D006760 7.4e-10 67.0 76 50.0
arahy.Tifrunner.gnm1.ann1.3828X0 Arachis hypogaea HOM05D005517 ORTHO05D006760 9.6e-10 66.6 76 50.0
CDE08G1355 Ceratophyllum demersum HOM05D005517 ORTHO05D006760 9.6e-10 66.6 77 54.5
Dinv25651 Davidia involucrata HOM05D005517 ORTHO05D006760 9.6e-10 66.6 69 47.8
Nitab4.5_0007375g0080 Nicotiana tabacum HOM05D005517 ORTHO05D006760 9.6e-10 66.6 69 50.7
Oeu063019.1 Olea europaea HOM05D005517 ORTHO05D006760 9.6e-10 66.6 76 51.3
PSO210G3561 Papaver somniferum HOM05D005517 ORTHO05D006760 9.6e-10 66.6 72 48.6
Potri.001G328100 Populus trichocarpa HOM05D005517 ORTHO05D006760 9.6e-10 66.6 76 46.1
CSS0038475 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 1.3e-09 66.2 67 50.7
Cc10_g16370 Coffea canephora HOM05D005517 ORTHO05D006760 1.3e-09 66.2 76 50.0
Sopen02g038880 Solanum pennellii HOM05D005517 ORTHO05D006760 1.3e-09 66.2 69 50.7
PGSC0003DMG402020250 Solanum tuberosum HOM05D005517 ORTHO05D006760 1.3e-09 66.2 69 50.7
CAN.G473.115 Capsicum annuum HOM05D005517 ORTHO05D006760 1.6e-09 65.9 69 49.3
CiPaw.04G038900 Carya illinoinensis HOM05D005517 ORTHO05D006760 1.6e-09 65.9 70 50.0
ClCG05G013610 Citrullus lanatus HOM05D005517 ORTHO05D006760 1.6e-09 65.9 76 50.0
Glyma.19G093900 Glycine max HOM05D005517 ORTHO05D006760 1.6e-09 65.9 76 48.7
MD14G1126500 Malus domestica HOM05D005517 ORTHO05D006760 1.6e-09 65.9 76 50.0
Nn3g16415 Nelumbo nucifera HOM05D005517 ORTHO05D006760 1.6e-09 65.9 77 51.9
TWI34G0084 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 2.1e-09 65.5 77 49.4
TWI34G1158 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 2.1e-09 65.5 77 49.4
vmacro22457 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 2.1e-09 65.5 69 47.8
HPP92_000894 Vanilla planifolia HOM05D005517 ORTHO05D006760 2.1e-09 65.5 76 48.7
Phvul.001G091300 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 2.8e-09 65.1 77 49.4
Rhsim08G0041900 Rhododendron simsii HOM05D005517 ORTHO05D006760 2.8e-09 65.1 67 50.7
TWI60G0382 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 2.8e-09 65.1 76 48.7
FvH4_5g10930 Fragaria vesca HOM05D005517 ORTHO05D006760 3.7e-09 64.7 79 46.8
FAN08G0577 Fragaria x ananassa HOM05D005517 ORTHO05D006760 3.7e-09 64.7 79 46.8
FAN13G3313 Fragaria x ananassa HOM05D005517 ORTHO05D006760 3.7e-09 64.7 79 46.8
FAN18G2496 Fragaria x ananassa HOM05D005517 ORTHO05D006760 3.7e-09 64.7 79 46.8
HanXRQChr02g0035131 Helianthus annuus HOM05D005517 ORTHO05D006760 3.7e-09 64.7 69 47.8
Peaxi162Scf00420g00633 Petunia axillaris HOM05D005517 ORTHO05D006760 4.8e-09 64.3 69 47.8
Prupe.5G129500 Prunus persica HOM05D005517 ORTHO05D006760 4.8e-09 64.3 76 50.0
Lj1g0000511 Lotus japonicus HOM05D005517 ORTHO05D006760 6.2e-09 63.9 75 44.0
Hund05668 Selenicereus undatus HOM05D005517 ORTHO05D006760 6.2e-09 63.9 77 49.4
Ca_14034_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 8.1e-09 63.5 71 52.1
RcHm_v2.0_Chr1g0371371 Rosa chinensis HOM05D005517 ORTHO05D006760 1.1e-08 63.2 75 46.7
RcHm_v2.0_Chr7g0186891 Rosa chinensis HOM05D005517 ORTHO05D006760 1.1e-08 63.2 75 46.7
ECA232G0857 Erigeron canadensis HOM05D005517 ORTHO05D006760 1.4e-08 62.8 69 46.4
EL10Ac7g18130 Beta vulgaris HOM05D005517 ORTHO05D006760 1.8e-08 62.4 74 47.3
Eucgr.H04420 Eucalyptus grandis HOM05D005517 ORTHO05D006760 1.8e-08 62.4 76 50.0
Sabra16G0209900 Salix brachista HOM05D005517 ORTHO05D006760 1.8e-08 62.4 51 54.9
Haze_14891 Corylus avellana HOM05D005517 ORTHO05D006760 2.4e-08 62.0 51 54.9
Lalb_Chr05g0214841 Lupinus albus HOM05D005517 ORTHO05D006760 2.4e-08 62.0 72 50.0
EL10Ac4g09777 Beta vulgaris HOM05D005517 ORTHO05D006760 3.1e-08 61.6 76 50.0
MD06G1118400 Malus domestica HOM05D005517 ORTHO05D006760 3.1e-08 61.6 73 49.3
Medtr7g028755 Medicago truncatula HOM05D005517 ORTHO05D006760 3.1e-08 61.6 75 44.0
Pp3c14_7680 Physcomitrium patens HOM05D005517 ORTHO05D006760 3.1e-08 61.6 59 57.6
CANSAT64G1159 Cannabis sativa HOM05D005517 ORTHO05D006760 4.0e-08 61.2 76 47.4
PGR142G3118 Punica granatum HOM05D005517 ORTHO05D006760 4.0e-08 61.2 76 48.7
Lsat_1_v5_gn_4_78980 Lactuca sativa HOM05D005517 ORTHO05D006760 5.3e-08 60.8 67 46.3
Medtr3g007670 Medicago truncatula HOM05D005517 ORTHO05D006760 9.0e-08 60.1 76 44.7
Phvul.009G125500 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 9.0e-08 60.1 55 50.9
THA.LOC104814182 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 9.0e-08 60.1 50 54.0
Os03g0733000 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 1.5e-07 59.3 71 49.3
TPR.G30072 Trifolium pratense HOM05D005517 ORTHO05D006760 1.5e-07 59.3 72 44.4
HanXRQChr16g0497941 Helianthus annuus HOM05D005517 ORTHO05D006760 2.0e-07 58.9 69 44.9
Lalb_Chr16g0380111 Lupinus albus HOM05D005517 ORTHO05D006760 2.0e-07 58.9 75 46.7
CsaV3_3G026940 Cucumis sativus L. HOM05D005517 ORTHO05D006760 5.8e-07 57.4 76 48.7
Rhsim10G0005200 Rhododendron simsii HOM05D005517 ORTHO05D006760 5.8e-07 57.4 61 47.5
arahy.Tifrunner.gnm1.ann1.9JMW1H Arachis hypogaea HOM05D005517 ORTHO05D006760 7.6e-07 57.0 49 55.1
MELO3C014894.2 Cucumis melo HOM05D005517 ORTHO05D006760 9.9e-07 56.6 76 47.4
TPR.G36037 Trifolium pratense HOM05D005517 ORTHO05D006760 9.9e-07 56.6 50 54.0
Psat6g022360 Pisum sativum HOM05D005517 ORTHO05D006760 1.3e-06 56.2 68 42.6
Peaxi162Scf00064g01122 Petunia axillaris HOM05D005517 ORTHO05D006760 1.7e-06 55.8 51 51.0
Ca_26962_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 4.9e-06 54.3 79 45.6


User provided reference genes

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