Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 0.0e+00 1796.6 1034 100.0
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 2.9e-90 337.8 1028 31.8
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 6.1e-72 276.9 517 37.3
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 4.0e-71 274.2 526 35.9
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 7.5e-70 270.0 619 38.0
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 1.2e-67 262.7 500 38.2
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 2.0e-67 261.9 603 34.2
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 8.0e-64 250.0 577 33.4
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 1.4e-63 249.2 518 36.1
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 5.2e-63 247.3 488 36.9
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 1.2e-62 246.1 671 32.3
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 5.7e-62 243.8 559 37.0
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 4.9e-61 240.7 532 33.5
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 1.8e-60 238.8 539 37.3
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 7.0e-60 236.9 518 38.8
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 9.2e-60 236.5 583 34.8
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 1.6e-59 235.7 518 34.7
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 2.3e-58 231.9 719 33.2
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 9.5e-57 226.5 506 36.2
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 9.5e-57 226.5 584 33.7
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 1.6e-56 225.7 542 33.0
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 1.6e-56 225.7 663 30.0
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 2.1e-56 225.3 526 32.5
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 4.7e-56 224.2 684 31.7
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 6.2e-56 223.8 524 35.3
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 8.0e-56 223.4 515 33.2
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 3.1e-55 221.5 508 32.9
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 3.1e-55 221.5 508 32.9
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 4.0e-55 221.1 530 32.5
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 4.0e-55 221.1 525 36.0
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 8.9e-55 219.9 511 33.3
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 2.0e-54 218.8 510 33.5
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 1.3e-53 216.1 510 34.3
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 1.7e-53 215.7 552 31.5
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 1.7e-53 215.7 566 31.4
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 2.2e-53 215.3 501 32.7
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 6.4e-53 213.8 549 34.4
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 8.3e-53 213.4 518 34.2
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 1.1e-52 213.0 533 32.5
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 1.4e-52 212.6 550 35.1
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 1.9e-52 212.2 518 33.8
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 1.9e-52 212.2 518 34.0
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 7.0e-52 210.3 525 31.8
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 7.0e-52 210.3 518 34.6
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 7.0e-52 210.3 560 31.1
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 9.2e-52 209.9 549 31.5
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 9.2e-52 209.9 584 30.5
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 1.6e-51 209.1 521 29.9
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 2.0e-51 208.8 704 28.7
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 4.6e-51 207.6 782 28.5
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 3.9e-50 204.5 584 32.7
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 3.9e-50 204.5 550 34.2
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 8.6e-50 203.4 505 32.7
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 8.6e-50 203.4 584 32.7
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 1.1e-49 203.0 521 32.2
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 7.3e-49 200.3 514 33.9
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 1.6e-48 199.1 533 33.2
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 4.7e-48 197.6 519 33.7
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 4.0e-47 194.5 527 30.7
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 4.0e-47 194.5 527 30.7
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 4.0e-47 194.5 498 30.7
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 2.0e-46 192.2 742 27.8
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 7.5e-46 190.3 532 30.6
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 7.5e-46 190.3 494 32.0
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 2.9e-45 188.3 530 30.8
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 3.7e-45 188.0 604 31.1
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 4.9e-45 187.6 378 34.1
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 1.4e-44 186.0 546 29.7
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 5.4e-44 184.1 508 30.9
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 6.0e-43 180.6 398 32.9
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 2.6e-38 165.2 459 33.6
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 2.9e-37 161.8 559 31.3
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 3.8e-37 161.4 557 28.7
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 1.4e-36 159.5 549 29.5
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 4.1e-36 157.9 371 36.7
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 5.4e-36 157.5 530 31.7
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 1.6e-35 156.0 517 30.8
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 2.5e-33 148.7 241 41.5
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 2.1e-32 145.6 515 29.9
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 1.1e-31 143.3 404 30.2
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 6.9e-31 140.6 538 28.8
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 1.3e-29 136.3 579 26.1
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 7.1e-28 130.6 440 27.7
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 3.5e-27 128.3 841 25.2
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 2.3e-26 125.6 525 26.5
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 5.6e-25 120.9 592 28.5
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 5.6e-25 120.9 511 29.9
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 1.2e-19 103.2 221 34.4
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 1.1e-15 90.1 727 24.9
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 1.7e-13 82.8 323 29.1
Hma1.2p1_0810F.1_g221910 Hydrangea macrophylla HOM05D007213 ORTHO05D009165 7.1e-12 77.4 153 36.6
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 1.1e-09 70.1 588 23.1
Actinidia08359 Actinidia chinensis HOM05D007213 ORTHO05D009165 4.8e-08 64.7 210 30.5
Actinidia37289 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.4e-07 62.4 155 32.3


User provided reference genes

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