Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 9.1e-187 656.8 331 100.0
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 2.4e-78 296.6 260 56.5
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 2.4e-70 270.0 261 53.6
AagrBONN_evm.TU.Sc2ySwM_340.195 Anthoceros agrestis HOM05D006649 ORTHO05D023509 1.2e-37 161.4 201 45.3
Cre12.g543900 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D023509 3.1e-25 120.2 294 33.0
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 1.8e-17 94.4 178 33.1
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 1.2e-16 91.7 199 28.6
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 3.4e-16 90.1 204 29.4
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 5.8e-16 89.4 195 30.8
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 7.6e-16 89.0 187 30.5
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 7.6e-16 89.0 211 29.9
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 1.3e-15 88.2 198 28.3
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 1.3e-15 88.2 195 29.2
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 2.2e-15 87.4 182 30.8
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 2.9e-15 87.0 200 29.0
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 2.9e-15 87.0 200 29.0
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 2.9e-15 87.0 208 29.3
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 2.9e-15 87.0 185 30.3
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 3.8e-15 86.7 180 29.4
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 3.8e-15 86.7 189 29.1
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 3.8e-15 86.7 186 30.1
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 4.9e-15 86.3 195 29.2
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 4.9e-15 86.3 173 31.2
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 4.9e-15 86.3 184 29.3
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 6.4e-15 85.9 184 29.3
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 6.4e-15 85.9 184 29.3
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 6.4e-15 85.9 184 29.3
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 6.4e-15 85.9 178 29.2
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 6.4e-15 85.9 204 27.5
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 8.4e-15 85.5 185 29.2
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 8.4e-15 85.5 184 30.4
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 8.4e-15 85.5 197 28.9
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 1.1e-14 85.1 184 29.3
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 1.1e-14 85.1 182 29.7
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 1.1e-14 85.1 167 31.7
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 1.1e-14 85.1 192 28.1
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 1.4e-14 84.7 184 29.3
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 1.4e-14 84.7 167 29.9
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 1.4e-14 84.7 175 31.4
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 1.4e-14 84.7 196 28.6
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 1.4e-14 84.7 167 30.5
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 1.9e-14 84.3 171 30.4
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 1.9e-14 84.3 166 30.1
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 1.9e-14 84.3 166 30.1
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 1.9e-14 84.3 209 29.2
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 1.9e-14 84.3 178 28.7
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 1.9e-14 84.3 180 28.9
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 1.9e-14 84.3 196 29.1
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 1.9e-14 84.3 187 28.9
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 2.4e-14 84.0 166 30.1
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 2.4e-14 84.0 213 28.6
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 2.4e-14 84.0 168 31.0
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 2.4e-14 84.0 193 30.6
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 2.4e-14 84.0 167 32.9
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 4.2e-14 83.2 169 32.0
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 4.2e-14 83.2 167 29.3
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 4.2e-14 83.2 201 28.4
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 4.2e-14 83.2 206 28.2
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 5.4e-14 82.8 176 29.0
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 5.4e-14 82.8 176 29.0
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 5.4e-14 82.8 167 29.9
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 7.1e-14 82.4 191 28.3
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 9.3e-14 82.0 198 27.3
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 1.2e-13 81.6 186 28.0
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 1.2e-13 81.6 179 27.4
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 1.2e-13 81.6 214 27.6
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 1.2e-13 81.6 217 26.7
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 1.6e-13 81.3 179 27.4
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 2.1e-13 80.9 186 29.0
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 2.1e-13 80.9 177 29.4
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 2.1e-13 80.9 182 29.7
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 2.7e-13 80.5 169 29.6
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 2.7e-13 80.5 200 26.5
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 2.7e-13 80.5 200 26.5
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 2.7e-13 80.5 169 29.6
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 3.5e-13 80.1 180 27.8
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 3.5e-13 80.1 177 28.8
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 4.6e-13 79.7 208 26.9
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 4.6e-13 79.7 194 28.9
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 4.6e-13 79.7 178 27.0
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 6.0e-13 79.3 182 29.1
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 6.0e-13 79.3 167 28.7
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 6.0e-13 79.3 184 28.3
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 1.0e-12 78.6 163 29.4
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 1.3e-12 78.2 179 31.3
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 1.7e-12 77.8 186 28.0
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 2.3e-12 77.4 169 29.6
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 2.3e-12 77.4 170 28.8
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 3.0e-12 77.0 148 32.4
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 3.9e-12 76.6 173 29.5
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 3.9e-12 76.6 181 27.1
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 3.9e-12 76.6 170 27.6
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 5.1e-12 76.3 176 29.0
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 7.3e-11 72.4 187 28.9
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 9.6e-11 72.0 167 28.7
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 1.6e-10 71.2 179 27.9
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 4.8e-10 69.7 225 24.9
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 1.1e-09 68.6 208 26.0
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 9.0e-09 65.5 111 31.5
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 2.6e-08 63.9 167 27.5
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 2.9e-07 60.5 156 26.9
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 3.8e-07 60.1 156 27.6
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 3.8e-07 60.1 180 26.1
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 6.4e-07 59.3 92 35.9
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 1.9e-06 57.8 131 27.5
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 4.2e-06 56.6 91 33.0


User provided reference genes

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