Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0053s0024 Marchantia polymorpha HOM05D006960 ORTHO05D008699 5.5e-142 507.7 267 100.0
Pp3c20_11370 Physcomitrium patens HOM05D006960 ORTHO05D008699 4.8e-61 238.8 240 58.8
AUR62004502 Chenopodium quinoa HOM05D006960 ORTHO05D008699 8.7e-55 218.0 237 54.0
PGR142G3971 Punica granatum HOM05D006960 ORTHO05D008699 3.7e-53 212.6 255 51.4
SMO351G0341 Selaginella moellendorffii HOM05D006960 ORTHO05D008699 3.7e-53 212.6 159 69.2
EL10Ac1g00259 Beta vulgaris HOM05D006960 ORTHO05D008699 2.0e-51 206.8 237 51.5
Atru.chr5.678 Acer truncatum HOM05D006960 ORTHO05D008699 5.9e-51 205.3 237 52.3
RcHm_v2.0_Chr1g0359831 Rosa chinensis HOM05D006960 ORTHO05D008699 5.9e-51 205.3 240 51.2
TWI14G0597 Tripterygium wilfordii HOM05D006960 ORTHO05D008699 3.8e-50 202.6 242 50.8
Zm00001eb080710 Zea mays HOM05D006960 ORTHO05D008699 1.9e-49 200.3 233 52.4
FAN06G2002 Fragaria x ananassa HOM05D006960 ORTHO05D008699 4.2e-49 199.1 237 51.5
MD07G1150800 Malus domestica HOM05D006960 ORTHO05D008699 4.2e-49 199.1 235 51.1
HPP92_002925 Vanilla planifolia HOM05D006960 ORTHO05D008699 4.2e-49 199.1 152 70.4
MELO3C024139.2 Cucumis melo HOM05D006960 ORTHO05D008699 5.5e-49 198.7 236 51.7
FAN06G3195 Fragaria x ananassa HOM05D006960 ORTHO05D008699 5.5e-49 198.7 237 51.5
FAN10G4095 Fragaria x ananassa HOM05D006960 ORTHO05D008699 5.5e-49 198.7 238 50.4
QL04p060559 Quercus lobata HOM05D006960 ORTHO05D008699 7.2e-49 198.4 231 51.5
Cpa.g.sc46.111 Carica papaya HOM05D006960 ORTHO05D008699 9.3e-49 198.0 235 51.9
FvH4_7g16680 Fragaria vesca HOM05D006960 ORTHO05D008699 9.3e-49 198.0 237 51.5
FAN10G0984 Fragaria x ananassa HOM05D006960 ORTHO05D008699 9.3e-49 198.0 239 49.8
Solyc05g050570.3 Solanum lycopersicum HOM05D006960 ORTHO05D008699 9.3e-49 198.0 252 48.4
Aqoxy6G00316 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 1.2e-48 197.6 236 50.0
GSVIVG01027159001 Vitis vinifera HOM05D006960 ORTHO05D008699 1.2e-48 197.6 238 50.8
TAR629G1073 Trochodendron aralioides HOM05D006960 ORTHO05D008699 1.6e-48 197.2 230 52.2
Sopen05g029010 Solanum pennellii HOM05D006960 ORTHO05D008699 2.7e-48 196.4 252 48.0
DCAR_021504 Daucus carota HOM05D006960 ORTHO05D008699 3.5e-48 196.1 237 50.2
FAN01G3090 Fragaria x ananassa HOM05D006960 ORTHO05D008699 4.6e-48 195.7 239 49.4
Potri.014G099500 Populus trichocarpa HOM05D006960 ORTHO05D008699 4.6e-48 195.7 226 51.3
Cc01_g12480 Coffea canephora HOM05D006960 ORTHO05D008699 6.1e-48 195.3 216 53.7
Prupe.2G189500 Prunus persica HOM05D006960 ORTHO05D008699 6.1e-48 195.3 234 50.9
Haze_15666 Corylus avellana HOM05D000451 ORTHO05D000351 7.9e-48 194.9 252 48.8
MBI06_g44795_MAGBIO Magnolia biondii HOM05D006960 ORTHO05D008699 7.9e-48 194.9 181 61.3
PSO063G6262 Papaver somniferum HOM05D006960 ORTHO05D008699 7.9e-48 194.9 217 52.1
ClCG09G009460 Citrullus lanatus HOM05D006960 ORTHO05D008699 1.0e-47 194.5 237 50.2
Nn8g41032 Nelumbo nucifera HOM05D006960 ORTHO05D008699 1.0e-47 194.5 202 56.4
CANSAT56G1276 Cannabis sativa HOM05D006960 ORTHO05D008699 1.8e-47 193.7 254 50.4
PGSC0003DMG400007011 Solanum tuberosum HOM05D006960 ORTHO05D008699 2.3e-47 193.4 217 51.2
Ciclev10022060m.g Citrus clementina HOM05D006960 ORTHO05D008699 3.0e-47 193.0 238 48.3
Eucgr.E00049 Eucalyptus grandis HOM05D006960 ORTHO05D008699 3.9e-47 192.6 235 50.2
Lsat_1_v5_gn_8_13101 Lactuca sativa HOM05D006960 ORTHO05D008699 3.9e-47 192.6 253 46.2
Oeu007886.1 Olea europaea HOM05D006960 ORTHO05D008699 3.9e-47 192.6 233 50.2
Oeu014974.1 Olea europaea HOM05D006960 ORTHO05D008699 3.9e-47 192.6 233 50.2
vmacro12673 Vaccinium macrocarpon HOM05D006960 ORTHO05D008699 3.9e-47 192.6 231 50.2
Manes.05G022300 Manihot esculenta HOM05D006960 ORTHO05D008699 5.1e-47 192.2 226 54.0
Os04g0460500 Oryza sativa ssp. japonica HOM05D006960 ORTHO05D008699 5.1e-47 192.2 229 51.5
Sc01g0002630 Simmondsia chinensis HOM05D000016 ORTHO05D007083 5.1e-47 192.2 237 49.4
CSS0028122 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 6.7e-47 191.8 231 51.5
CARHR001180 Cardamine hirsuta HOM05D006960 ORTHO05D008699 6.7e-47 191.8 247 49.0
Migut.B01880 Erythranthe guttata HOM05D006960 ORTHO05D008699 6.7e-47 191.8 233 50.6
Rhsim04G0222700 Rhododendron simsii HOM05D006960 ORTHO05D008699 6.7e-47 191.8 231 50.6
Nitab4.5_0004506g0020 Nicotiana tabacum HOM05D006960 ORTHO05D008699 8.7e-47 191.4 217 51.2
Nitab4.5_0000258g0220 Nicotiana tabacum HOM05D006960 ORTHO05D008699 1.1e-46 191.0 217 51.2
CSS0036785 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 1.5e-46 190.7 231 51.1
Carub.0001s0093 Capsella rubella HOM05D006960 ORTHO05D008699 1.5e-46 190.7 247 48.6
Rhsim01G0172900 Rhododendron simsii HOM05D006960 ORTHO05D008699 1.5e-46 190.7 231 50.2
Actinidia20248 Actinidia chinensis HOM05D000567 ORTHO05D001981 3.3e-46 189.5 264 47.7
A09p69060 Brassica napus HOM05D006960 ORTHO05D008699 3.3e-46 189.5 231 50.2
TPR.G4075 Trifolium pratense HOM05D006960 ORTHO05D008699 3.3e-46 189.5 214 53.7
C08p53630 Brassica napus HOM05D006960 ORTHO05D008699 4.3e-46 189.1 231 50.2
BraA09t42243Z Brassica rapa HOM05D006960 ORTHO05D008699 4.3e-46 189.1 235 49.8
SalBow3G0783 Salvia bowleyana HOM05D006960 ORTHO05D008699 4.3e-46 189.1 235 49.4
Sed0021558 Sechium edule HOM05D006960 ORTHO05D008699 4.3e-46 189.1 215 51.6
Gohir.D11G102000 Gossypium hirsutum HOM05D006960 ORTHO05D008699 5.7e-46 188.7 241 48.1
HanXRQChr06g0170731 Helianthus annuus HOM05D006960 ORTHO05D008699 5.7e-46 188.7 232 49.6
MSTRG.17349 Avicennia marina HOM05D006960 ORTHO05D008699 1.3e-45 187.6 233 49.4
BolC8t52877H Brassica oleracea HOM05D006960 ORTHO05D008699 1.3e-45 187.6 236 50.4
Thhalv10008544m.g Eutrema salsugineum HOM05D006960 ORTHO05D008699 1.3e-45 187.6 231 48.9
Gorai.007G109000 Gossypium raimondii HOM05D006960 ORTHO05D008699 1.3e-45 187.6 241 48.5
Sabra14G0073000 Salix brachista HOM05D006960 ORTHO05D008699 1.3e-45 187.6 224 50.4
AT1G01290 Arabidopsis thaliana HOM05D006960 ORTHO05D008699 2.2e-45 186.8 230 50.9
CAN.G1178.29 Capsicum annuum HOM05D006960 ORTHO05D008699 2.2e-45 186.8 221 49.8
Gohir.A11G097200 Gossypium hirsutum HOM05D006960 ORTHO05D008699 2.2e-45 186.8 238 48.3
Thecc.01G341400 Theobroma cacao HOM05D006960 ORTHO05D008699 3.7e-45 186.0 260 47.7
Peaxi162Scf00716g00022 Petunia axillaris HOM05D006960 ORTHO05D008699 4.8e-45 185.7 226 49.6
ECA236G0577 Erigeron canadensis HOM05D006960 ORTHO05D008699 6.3e-45 185.3 232 49.6
unitig_899.g14796 Utricularia gibba HOM05D006960 ORTHO05D008699 6.3e-45 185.3 189 55.0
Sp1g01000 Schrenkiella parvula HOM05D006960 ORTHO05D008699 8.2e-45 184.9 243 49.0
COL.COLO4_21448 Corchorus olitorius HOM05D006960 ORTHO05D008699 1.4e-44 184.1 262 47.3
ATR0602G026 Amborella trichopoda HOM05D006960 ORTHO05D008699 1.8e-44 183.7 157 63.1
Aqoxy3G01066 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 1.8e-44 183.7 212 50.5
CAN.G1385.4 Capsicum annuum HOM05D006960 ORTHO05D008699 2.4e-44 183.3 182 56.0
PSO170G4910 Papaver somniferum HOM05D006960 ORTHO05D008699 4.1e-44 182.6 209 51.2
SGA_v2.0_scaffold22G09984 Striga asiatica HOM05D006960 ORTHO05D008699 4.1e-44 182.6 154 63.6
AL1G11170 Arabidopsis lyrata HOM05D006960 ORTHO05D008699 5.3e-44 182.2 157 64.3
Glyma.20G102700 Glycine max HOM05D006960 ORTHO05D008699 6.9e-44 181.8 237 49.8
Lj5g0001318 Lotus japonicus HOM05D006960 ORTHO05D008699 6.9e-44 181.8 232 47.8
Lalb_Chr06g0163941 Lupinus albus HOM05D006960 ORTHO05D008699 1.2e-43 181.0 228 49.1
arahy.Tifrunner.gnm1.ann1.EW69V8 Arachis hypogaea HOM05D006471 ORTHO05D008157 3.4e-43 179.5 165 60.6
Aa31LG5G970 Aethionema arabicum HOM05D000451 ORTHO05D000351 4.5e-43 179.1 165 63.0
Phvul.007G014400 Phaseolus vulgaris HOM05D006960 ORTHO05D008699 4.5e-43 179.1 232 47.4
Ca_11259_v3 Cicer arietinum L. HOM05D006960 ORTHO05D008699 5.9e-43 178.7 236 48.3
Psat6g234040 Pisum sativum HOM05D006960 ORTHO05D008699 1.7e-42 177.2 234 48.3
VMungo0720G2201 Vigna mungo HOM05D006960 ORTHO05D008699 1.7e-42 177.2 232 47.4
Medtr5g015740 Medicago truncatula HOM05D006960 ORTHO05D008699 2.5e-41 173.3 250 44.8
arahy.Tifrunner.gnm1.ann1.CCVT8N Arachis hypogaea HOM05D006960 ORTHO05D008699 5.5e-41 172.2 162 60.5
Medtr1g114590 Medicago truncatula HOM05D006960 ORTHO05D008699 1.2e-40 171.0 250 44.4
Hund16718 Selenicereus undatus HOM05D006960 ORTHO05D008699 4.6e-40 169.1 215 49.8
Dinv22299 Davidia involucrata HOM05D006960 ORTHO05D008699 7.9e-40 168.3 210 51.0
MCO01G113 Micromonas commoda HOM05D006960 ORTHO05D008699 1.0e-39 167.9 194 54.6
CBR_g23014 Chara braunii HOM05D006960 ORTHO05D008699 8.8e-39 164.9 156 57.7
Cre08.g361050 Chlamydomonas reinhardtii HOM05D006960 ORTHO05D008699 7.4e-38 161.8 154 57.1
VMungo0964G0001 Vigna mungo HOM05D006960 ORTHO05D008699 2.5e-33 146.7 152 51.3
AUR62014969 Chenopodium quinoa HOM05D006960 ORTHO05D008699 4.7e-32 142.5 237 40.9
CDE10G0916 Ceratophyllum demersum HOM05D000108 ORTHO05D001781 2.5e-25 120.2 112 58.9
CDE10G0236 Ceratophyllum demersum HOM05D006960 ORTHO05D008699 2.7e-24 116.7 92 63.0
Cfa022703 Carpinus fangiana HOM05D006960 ORTHO05D008699 8.0e-24 115.2 162 46.3
HPP92_028636 Vanilla planifolia HOM05D006960 ORTHO05D008699 1.8e-23 114.0 157 47.1
AUR62023452 Chenopodium quinoa HOM05D000040 ORTHO05D000759 4.0e-23 112.8 215 39.1
FAN03G0019 Fragaria x ananassa HOM05D006960 ORTHO05D008699 2.6e-22 110.2 93 60.2
CsaV3_7G025390 Cucumis sativus L. HOM05D006960 ORTHO05D008699 2.8e-21 106.7 160 45.0
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 1.5e-17 94.4 119 42.9
PRCOL_00000953 Prasinoderma coloniale HOM05D006960 ORTHO05D008699 8.8e-15 85.1 156 36.5
Cpa.g.sc96.27 Carica papaya HOM05D006960 ORTHO05D008699 3.1e-12 76.6 151 39.1
TAR636G2744 Trochodendron aralioides HOM05D006960 ORTHO05D008699 2.0e-11 73.9 117 40.2


User provided reference genes

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