Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0053s0005 Marchantia polymorpha HOM05D011080 ORTHO05D000239 4.9e-193 677.6 327 100.0
Mapoly0053s0003 Marchantia polymorpha HOM05D011080 ORTHO05D255763 1.9e-67 260.4 136 91.9
Mapoly0041s0095 Marchantia polymorpha HOM05D011080 ORTHO05D000239 6.7e-57 225.3 314 41.1
Mapoly0067s0036 Marchantia polymorpha HOM05D011080 ORTHO05D000239 5.0e-52 209.1 315 38.7
Mapoly0080s0029 Marchantia polymorpha HOM05D011080 ORTHO05D000239 1.4e-38 164.5 305 32.1
Mapoly0067s0037 Marchantia polymorpha HOM05D011080 ORTHO05D000239 5.3e-38 162.5 313 34.2
Mapoly0031s0035 Marchantia polymorpha HOM05D004348 ORTHO05D000239 2.2e-36 157.1 292 33.6
Mapoly2546s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.2e-34 151.4 292 32.5
Mapoly0200s0002 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.6e-34 151.0 317 31.5
Mapoly0071s0031 Marchantia polymorpha HOM05D011080 ORTHO05D000239 3.0e-33 146.7 319 32.3
Mapoly0049s0015 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.5e-32 144.4 319 30.1
Mapoly0637s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 7.4e-32 142.1 292 31.5
Mapoly0064s0093 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.3e-31 141.4 297 32.3
Mapoly0032s0031 Marchantia polymorpha HOM05D011080 ORTHO05D000239 1.7e-31 141.0 308 31.8
Mapoly1060s0002 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.7e-31 141.0 315 30.2
Mapoly0120s0038 Marchantia polymorpha HOM05D011080 ORTHO05D256860 2.2e-31 140.6 309 31.1
Mapoly0893s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 4.1e-30 136.3 305 30.2
Mapoly0107s0021 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.2e-29 134.8 305 30.2
Mapoly0010s0128 Marchantia polymorpha HOM05D000005 ORTHO05D000239 2.0e-29 134.0 293 29.7
Mapoly0007s0015 Marchantia polymorpha HOM05D000005 ORTHO05D000239 2.6e-29 133.7 313 30.4
Mapoly0119s0056 Marchantia polymorpha HOM05D011080 ORTHO05D000239 4.5e-29 132.9 300 30.3
Mapoly0020s0126 Marchantia polymorpha HOM05D000242 ORTHO05D000700 1.3e-28 131.3 307 30.3
Mapoly0062s0120 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.3e-28 131.3 304 30.3
Mapoly0074s0030 Marchantia polymorpha HOM05D011080 ORTHO05D254173 3.8e-28 129.8 310 29.0
Mapoly0147s0004 Marchantia polymorpha HOM05D000242 ORTHO05D000700 1.5e-27 127.9 307 30.6
Mapoly0067s0038 Marchantia polymorpha HOM05D000005 ORTHO05D000239 1.9e-27 127.5 309 29.8
Mapoly0120s0044 Marchantia polymorpha HOM05D011080 ORTHO05D253140 4.2e-27 126.3 217 35.5
Mapoly0397s0001 Marchantia polymorpha HOM05D020945 ORTHO05D253181 5.5e-27 125.9 308 30.5
Mapoly0200s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 7.2e-27 125.6 284 30.3
Mapoly0147s0041 Marchantia polymorpha HOM05D000242 ORTHO05D000700 1.6e-26 124.4 337 28.5
Mapoly0147s0044 Marchantia polymorpha HOM05D000242 ORTHO05D000700 1.6e-26 124.4 339 27.7
Mapoly0120s0017 Marchantia polymorpha HOM05D011080 ORTHO05D000239 3.0e-25 120.2 258 30.6
Mapoly0108s0045 Marchantia polymorpha HOM05D020945 ORTHO05D000713 1.2e-24 118.2 311 30.5
Mapoly0108s0037 Marchantia polymorpha HOM05D029023 ORTHO05D030122 9.8e-24 115.2 311 29.9
Mapoly0052s0114 Marchantia polymorpha HOM05D029023 ORTHO05D030122 1.7e-23 114.4 280 31.1
Mapoly0147s0002 Marchantia polymorpha HOM05D020945 ORTHO05D251377 1.7e-23 114.4 314 29.9
Mapoly0120s0019 Marchantia polymorpha HOM05D004348 ORTHO05D000239 4.8e-23 112.8 297 30.6
Mapoly0120s0043 Marchantia polymorpha HOM05D011080 ORTHO05D255325 8.3e-23 112.1 249 32.1
Mapoly0555s0001 Marchantia polymorpha HOM05D029023 ORTHO05D030122 1.1e-22 111.7 280 30.4
Mapoly0116s0050 Marchantia polymorpha HOM05D011080 ORTHO05D252286 1.6e-21 107.8 300 26.0
Mapoly0041s0073 Marchantia polymorpha HOM05D011080 ORTHO05D255563 1.0e-20 105.1 283 29.7
Mapoly2448s0001 Marchantia polymorpha HOM05D020945 ORTHO05D251686 8.5e-20 102.1 223 31.8
Mapoly0346s0002 Marchantia polymorpha HOM05D020945 ORTHO05D254421 1.5e-19 101.3 333 27.6
Mapoly0016s0164 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.9e-19 100.9 214 30.4
Mapoly0147s0001 Marchantia polymorpha HOM05D020945 ORTHO05D253211 9.4e-19 98.6 332 27.4
Pp3c24_4860 Physcomitrium patens HOM05D004348 ORTHO05D000239 6.1e-18 95.9 187 34.8
CAN.G371.44 Capsicum annuum HOM05D004348 ORTHO05D006191 8.3e-15 85.5 319 25.7
Mapoly0062s0059 Marchantia polymorpha HOM05D000005 ORTHO05D000239 8.3e-15 85.5 195 29.7
ATR1159G040 Amborella trichopoda HOM05D004348 ORTHO05D006191 2.4e-14 84.0 293 27.3
ClCG05G019730 Citrullus lanatus HOM05D004348 ORTHO05D006191 5.4e-14 82.8 313 24.6
MD15G1086600 Malus domestica HOM05D004348 ORTHO05D006191 7.0e-14 82.4 304 26.0
Solyc04g079280.4 Solanum lycopersicum HOM05D004348 ORTHO05D006191 7.0e-14 82.4 319 25.7
Sopen04g032870 Solanum pennellii HOM05D004348 ORTHO05D006191 7.0e-14 82.4 319 25.7
PGSC0003DMG400007988 Solanum tuberosum HOM05D004348 ORTHO05D006191 7.0e-14 82.4 316 25.3
EL10Ac1g01783 Beta vulgaris HOM05D004348 ORTHO05D006191 9.1e-14 82.0 294 26.5
Os03g0185500 Oryza sativa ssp. japonica HOM05D004348 ORTHO05D006191 9.1e-14 82.0 299 27.4
Pp3c2_1120 Physcomitrium patens HOM05D002195 ORTHO05D317592 9.1e-14 82.0 286 24.5
Sc02g0006980 Simmondsia chinensis HOM05D004348 ORTHO05D006191 2.7e-13 80.5 297 25.3
vmacro21553 Vaccinium macrocarpon HOM05D004348 ORTHO05D006191 2.7e-13 80.5 305 24.6
FvH4_2g34840 Fragaria vesca HOM05D004348 ORTHO05D006191 3.5e-13 80.1 297 23.9
SEGI_07910 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 3.5e-13 80.1 335 25.7
AL7G16960 Arabidopsis lyrata HOM05D004348 ORTHO05D006191 4.5e-13 79.7 301 25.2
HanXRQChr16g0507461 Helianthus annuus HOM05D004348 ORTHO05D006191 4.5e-13 79.7 302 27.2
MD08G1105600 Malus domestica HOM05D004348 ORTHO05D006191 4.5e-13 79.7 296 25.3
Carub.0007s0605 Capsella rubella HOM05D004348 ORTHO05D006191 5.9e-13 79.3 319 24.8
Sp7g32110 Schrenkiella parvula HOM05D004348 ORTHO05D006191 5.9e-13 79.3 318 24.8
Ciclev10000175m.g Citrus clementina HOM05D004348 ORTHO05D006191 7.7e-13 79.0 322 24.2
Aqoxy5G01277 Aquilegia oxysepala HOM05D004348 ORTHO05D006191 1.0e-12 78.6 303 26.1
Peaxi162Scf00528g00825 Petunia axillaris HOM05D004348 ORTHO05D006191 1.0e-12 78.6 304 25.7
C01p04470 Brassica napus HOM05D004348 ORTHO05D006191 1.3e-12 78.2 296 25.3
BolC1t00433H Brassica oleracea HOM05D004348 ORTHO05D006191 1.3e-12 78.2 296 25.3
Migut.N02696 Erythranthe guttata HOM05D004348 ORTHO05D006191 1.3e-12 78.2 301 24.6
Gohir.A01G118500 Gossypium hirsutum HOM05D004348 ORTHO05D006191 1.3e-12 78.2 296 25.3
Gohir.D01G106800 Gossypium hirsutum HOM05D004348 ORTHO05D006191 1.3e-12 78.2 296 25.3
Thecc.08G012500 Theobroma cacao HOM05D004348 ORTHO05D006191 1.3e-12 78.2 299 24.7
TAR625G1112 Trochodendron aralioides HOM05D004348 ORTHO05D006191 1.3e-12 78.2 311 26.7
Manes.05G171200 Manihot esculenta HOM05D004348 ORTHO05D006191 1.7e-12 77.8 299 24.1
CARHR242470 Cardamine hirsuta HOM05D004348 ORTHO05D006191 2.3e-12 77.4 296 25.0
Gorai.002G131100 Gossypium raimondii HOM05D004348 ORTHO05D006191 2.3e-12 77.4 296 25.3
THA.LOC104806947 Tarenaya hassleriana HOM05D004348 ORTHO05D006191 2.3e-12 77.4 305 26.9
A01p04110 Brassica napus HOM05D004348 ORTHO05D006191 2.9e-12 77.0 296 25.0
BraA01t00399Z Brassica rapa HOM05D004348 ORTHO05D006191 2.9e-12 77.0 296 25.0
Mapoly0033s0109 Marchantia polymorpha HOM05D004348 ORTHO05D006191 2.9e-12 77.0 329 25.5
Rhsim06G0047100 Rhododendron simsii HOM05D004348 ORTHO05D006191 2.9e-12 77.0 312 26.3
Sed0012719 Sechium edule HOM05D004348 ORTHO05D006191 2.9e-12 77.0 290 24.8
Lsat_1_v5_gn_4_124060 Lactuca sativa HOM05D004348 ORTHO05D006191 3.8e-12 76.6 295 26.8
AT4G34310 Arabidopsis thaliana HOM05D004348 ORTHO05D006191 5.0e-12 76.3 295 24.7
Psat6g012000 Pisum sativum HOM05D004348 ORTHO05D006191 5.0e-12 76.3 308 24.0
arahy.Tifrunner.gnm1.ann1.2EEB7P Arachis hypogaea HOM05D004348 ORTHO05D006191 8.6e-12 75.5 322 23.6
arahy.Tifrunner.gnm1.ann1.3D95JG Arachis hypogaea HOM05D004348 ORTHO05D006191 8.6e-12 75.5 322 23.6
AagrBONN_evm.TU.Sc2ySwM_344.1636 Anthoceros agrestis HOM05D004348 ORTHO05D006191 1.1e-11 75.1 314 25.5
Cpa.g.c24415.13 Carica papaya HOM05D004348 ORTHO05D006191 1.1e-11 75.1 303 24.8
Lj4A53T53 Lonicera japonica HOM05D004348 ORTHO05D006191 1.5e-11 74.7 291 25.4
Medtr1g019960 Medicago truncatula HOM05D004348 ORTHO05D006191 1.5e-11 74.7 290 24.8
Nn5g30212 Nelumbo nucifera HOM05D004348 ORTHO05D006191 1.5e-11 74.7 324 24.7
Actinidia15256 Actinidia chinensis HOM05D004348 ORTHO05D006191 1.9e-11 74.3 303 24.1
Cfa018516 Carpinus fangiana HOM05D004348 ORTHO05D006191 1.9e-11 74.3 300 24.7
Thhalv10024246m.g Eutrema salsugineum HOM05D004348 ORTHO05D006191 1.9e-11 74.3 313 23.6
Mapoly0120s0039 Marchantia polymorpha HOM05D011080 ORTHO05D252314 1.9e-11 74.3 126 34.1
FAN27G3414 Fragaria x ananassa HOM05D004348 ORTHO05D006191 2.5e-11 73.9 298 24.5
CiPaw.16G046500 Carya illinoinensis HOM05D004348 ORTHO05D006191 4.2e-11 73.2 320 24.4
Cc10_g04460 Coffea canephora HOM05D004348 ORTHO05D006191 4.2e-11 73.2 294 26.5
PGR031G2748 Punica granatum HOM05D004348 ORTHO05D006191 4.2e-11 73.2 297 24.2
GSVIVG01009553001 Vitis vinifera HOM05D004348 ORTHO05D006191 5.6e-11 72.8 295 23.4
Nitab4.5_0000068g0550 Nicotiana tabacum HOM05D004348 ORTHO05D006191 7.2e-11 72.4 296 24.0
Prupe.1G440200 Prunus persica HOM05D004348 ORTHO05D006191 7.2e-11 72.4 300 24.3
Lj5g0025546 Lotus japonicus HOM05D004348 ORTHO05D006191 9.5e-11 72.0 296 24.7
Pp3c17_5660 Physcomitrium patens HOM05D004348 ORTHO05D006191 9.5e-11 72.0 302 25.5
Mapoly0016s0166 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.2e-10 71.6 189 29.1
ECA232G4920 Erigeron canadensis HOM05D004348 ORTHO05D006191 2.1e-10 70.9 181 30.9
SMO144G0009 Selaginella moellendorffii HOM05D004348 ORTHO05D006191 2.1e-10 70.9 333 24.3
PRCOL_00001182 Prasinoderma coloniale HOM05D004348 ORTHO05D006191 2.8e-10 70.5 313 26.2
VMungo0647G0261 Vigna mungo HOM05D004348 ORTHO05D006191 2.8e-10 70.5 310 22.6
QL02p005708 Quercus lobata HOM05D004348 ORTHO05D006191 3.6e-10 70.1 317 22.7
DCAR_020931 Daucus carota HOM05D004348 ORTHO05D006191 4.7e-10 69.7 299 25.4
Oeu057258.1 Olea europaea HOM05D004348 ORTHO05D006191 8.0e-10 68.9 305 24.3
Pp3c2_2170 Physcomitrium patens HOM05D002195 ORTHO05D315015 2.3e-09 67.4 290 25.9
Phvul.001G020000 Phaseolus vulgaris HOM05D004348 ORTHO05D006191 4.0e-09 66.6 289 22.8
MSTRG.22274 Avicennia marina HOM05D004348 ORTHO05D006191 6.8e-09 65.9 180 29.4
Aa31LG2G16180 Aethionema arabicum HOM05D004348 ORTHO05D006191 8.9e-09 65.5 201 26.4
PSO675G6987 Papaver somniferum HOM05D004348 ORTHO05D006191 8.9e-09 65.5 189 30.7
Hund26625 Selenicereus undatus HOM05D004348 ORTHO05D006191 8.9e-09 65.5 324 23.8
CDE10G0798 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 1.5e-08 64.7 297 24.2
Glyma.14G081100 Glycine max HOM05D004348 ORTHO05D006191 1.5e-08 64.7 289 23.2
TPR.G13698 Trifolium pratense HOM05D004348 ORTHO05D006191 2.0e-08 64.3 180 26.7
Dinv35980 Davidia involucrata HOM05D004348 ORTHO05D006191 2.6e-08 63.9 215 27.0
COL.COLO4_26463 Corchorus olitorius HOM05D004348 ORTHO05D006191 1.7e-07 61.2 180 27.8
Duzib093G0393 Durio zibethinus HOM05D004348 ORTHO05D006191 2.2e-07 60.8 215 26.5
Glyma.17G244300 Glycine max HOM05D004348 ORTHO05D006191 8.3e-07 58.9 203 25.6
FAN15G1136 Fragaria x ananassa HOM05D004348 ORTHO05D006191 1.1e-06 58.5 187 24.6


User provided reference genes

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