Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0052s0030 Marchantia polymorpha HOM05D006995 ORTHO05D008870 3.4e-37 157.9 85 100.0
Migut.O00152 Erythranthe guttata HOM05D006995 ORTHO05D008870 4.5e-13 77.8 86 53.5
CBR_g45542 Chara braunii HOM05D006995 ORTHO05D008870 8.5e-12 73.6 81 51.9
Peaxi162Scf00089g01427 Petunia axillaris HOM05D006995 ORTHO05D008870 1.9e-11 72.4 86 46.5
CSS0043708 Camellia sinensis var. sinensis HOM05D006995 ORTHO05D008870 4.2e-11 71.2 86 47.7
Dinv20602 Davidia involucrata HOM05D006995 ORTHO05D008870 5.5e-11 70.9 86 46.5
AagrBONN_evm.TU.Sc2ySwM_368.3294 Anthoceros agrestis HOM05D006995 ORTHO05D008870 4.6e-10 67.8 70 51.4
unitig_26.g8807 Utricularia gibba HOM05D006995 ORTHO05D008870 1.0e-09 66.6 77 46.8
Aqoxy5G03762 Aquilegia oxysepala HOM05D006995 ORTHO05D008870 3.9e-09 64.7 85 51.8
Glyma.04G187800 Glycine max HOM05D006995 ORTHO05D008870 5.1e-09 64.3 71 46.5
Glyma.06G177900 Glycine max HOM05D006995 ORTHO05D008870 6.7e-09 63.9 71 47.9
Prupe.5G166100 Prunus persica HOM05D006995 ORTHO05D008870 1.5e-08 62.8 79 46.8
Medtr3g077017 Medicago truncatula HOM05D006995 ORTHO05D008870 2.5e-08 62.0 74 44.6
Psat5g116320 Pisum sativum HOM05D006995 ORTHO05D008870 2.5e-08 62.0 79 48.1
Sp2g26260 Schrenkiella parvula HOM05D006995 ORTHO05D008870 2.5e-08 62.0 93 45.2
arahy.Tifrunner.gnm1.ann1.W5ECLN Arachis hypogaea HOM05D006995 ORTHO05D008870 3.3e-08 61.6 71 46.5
arahy.Tifrunner.gnm1.ann1.X0DT51 Arachis hypogaea HOM05D006995 ORTHO05D008870 3.3e-08 61.6 71 46.5
Sc04g0001540 Simmondsia chinensis HOM05D006995 ORTHO05D008870 4.3e-08 61.2 61 55.7
ATR0743G118 Amborella trichopoda HOM05D006995 ORTHO05D008870 5.7e-08 60.8 92 44.6
CANSAT80G0726 Cannabis sativa HOM05D006995 ORTHO05D008870 5.7e-08 60.8 67 46.3
Lj1g0014247 Lotus japonicus HOM05D006995 ORTHO05D008870 5.7e-08 60.8 72 44.4
Aa31LG1G18840 Aethionema arabicum HOM05D006995 ORTHO05D008870 7.4e-08 60.5 93 44.1
CiPaw.12G030600 Carya illinoinensis HOM05D006995 ORTHO05D008870 7.4e-08 60.5 61 57.4
Phvul.009G174500 Phaseolus vulgaris HOM05D006995 ORTHO05D008870 7.4e-08 60.5 68 47.1
SalBow5G1368 Salvia bowleyana HOM05D006995 ORTHO05D008870 7.4e-08 60.5 68 45.6
SalBow5G3606 Salvia bowleyana HOM05D006995 ORTHO05D008870 7.4e-08 60.5 68 45.6
VMungo1309G2685 Vigna mungo HOM05D006995 ORTHO05D008870 7.4e-08 60.5 79 48.1
MSTRG.23164 Avicennia marina HOM05D006995 ORTHO05D008870 9.7e-08 60.1 82 42.7
CiPaw.11G020900 Carya illinoinensis HOM05D006995 ORTHO05D008870 9.7e-08 60.1 67 44.8
CsaV3_1G008810 Cucumis sativus L. HOM05D006995 ORTHO05D008870 9.7e-08 60.1 68 47.1
Pp3c8_17200 Physcomitrium patens HOM05D006995 ORTHO05D008870 9.7e-08 60.1 107 43.0
Actinidia24594 Actinidia chinensis HOM05D006995 ORTHO05D008870 1.3e-07 59.7 91 40.7
ClCG01G013460 Citrullus lanatus HOM05D006995 ORTHO05D008870 1.3e-07 59.7 68 45.6
MELO3C002295.2 Cucumis melo HOM05D006995 ORTHO05D008870 1.3e-07 59.7 68 45.6
TWI23G0026 Tripterygium wilfordii HOM05D006995 ORTHO05D008870 1.3e-07 59.7 77 42.9
ATR0824G277 Amborella trichopoda HOM05D006995 ORTHO05D008870 1.7e-07 59.3 92 43.5
Ca_16134_v3 Cicer arietinum L. HOM05D006995 ORTHO05D008870 1.7e-07 59.3 61 45.9
Gohir.D12G202400 Gossypium hirsutum HOM05D006995 ORTHO05D008870 1.7e-07 59.3 65 47.7
HanXRQChr04g0101331 Helianthus annuus HOM05D006995 ORTHO05D008870 1.7e-07 59.3 68 47.1
MSTRG.11491 Avicennia marina HOM05D006995 ORTHO05D008870 2.2e-07 58.9 91 41.8
Cc04_g11640 Coffea canephora HOM05D006995 ORTHO05D008870 2.2e-07 58.9 86 41.9
Gohir.A12G199700 Gossypium hirsutum HOM05D006995 ORTHO05D008870 2.2e-07 58.9 66 47.0
Gorai.008G217400 Gossypium raimondii HOM05D006995 ORTHO05D008870 2.2e-07 58.9 66 47.0
QL10p006993 Quercus lobata HOM05D006995 ORTHO05D008870 2.2e-07 58.9 68 45.6
Cpa.g.sc159.33 Carica papaya HOM05D006995 ORTHO05D008870 3.7e-07 58.2 70 44.3
Ca_22795_v3 Cicer arietinum L. HOM05D001863 ORTHO05D001962 3.7e-07 58.2 68 51.5
PGR044G0957 Punica granatum HOM05D006995 ORTHO05D008870 3.7e-07 58.2 86 44.2
TWI39G0505 Tripterygium wilfordii HOM05D006995 ORTHO05D008870 3.7e-07 58.2 67 44.8
Lalb_Chr08g0236711 Lupinus albus HOM05D006995 ORTHO05D008870 4.8e-07 57.8 68 42.6
Nitab4.5_0001793g0100 Nicotiana tabacum HOM05D006995 ORTHO05D008870 6.3e-07 57.4 68 39.7
Nitab4.5_0003703g0070 Nicotiana tabacum HOM05D006995 ORTHO05D008870 6.3e-07 57.4 68 39.7
Sed0018383 Sechium edule HOM05D006995 ORTHO05D008870 8.2e-07 57.0 75 40.0
Solyc03g112290.2 Solanum lycopersicum HOM05D006995 ORTHO05D008870 8.2e-07 57.0 67 40.3
Sopen03g031390 Solanum pennellii HOM05D006995 ORTHO05D008870 8.2e-07 57.0 67 40.3
RcHm_v2.0_Chr7g0192611 Rosa chinensis HOM05D006995 ORTHO05D008870 1.4e-06 56.2 79 45.6
Duzib205G0595 Durio zibethinus HOM05D006995 ORTHO05D008870 1.8e-06 55.8 66 47.0
PGSC0003DMG400018185 Solanum tuberosum HOM05D006995 ORTHO05D008870 1.8e-06 55.8 67 38.8
Thecc.03G024900 Theobroma cacao HOM05D006995 ORTHO05D008870 2.4e-06 55.5 65 46.2
Lj9C443G5 Lonicera japonica HOM05D006995 ORTHO05D008870 3.1e-06 55.1 91 37.4
Nn4g22611 Nelumbo nucifera HOM05D006995 ORTHO05D008870 3.1e-06 55.1 86 41.9
CAN.G338.27 Capsicum annuum HOM05D006995 ORTHO05D008870 4.1e-06 54.7 67 38.8
TAR629G0625 Trochodendron aralioides HOM05D006995 ORTHO05D008870 4.1e-06 54.7 86 41.9
FvH4_5g06250 Fragaria vesca HOM05D006995 ORTHO05D008870 5.3e-06 54.3 79 44.3
FAN08G0020 Fragaria x ananassa HOM05D006995 ORTHO05D008870 6.9e-06 53.9 79 43.0
Potri.012G085100 Populus trichocarpa HOM05D006995 ORTHO05D008870 6.9e-06 53.9 86 41.9


User provided reference genes

Program Settings