Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0052s0016 Marchantia polymorpha HOM05D005827 ORTHO05D005864 3.8e-80 301.6 171 100.0
Pp3c21_2370 Physcomitrium patens HOM05D005827 ORTHO05D005864 4.2e-18 95.5 143 46.9
AagrBONN_evm.TU.Sc2ySwM_228.4380 Anthoceros agrestis HOM05D005827 ORTHO05D005864 3.9e-16 89.0 94 56.4
SMO364G0308 Selaginella moellendorffii HOM05D005827 ORTHO05D000003 9.6e-15 84.3 143 41.3
SEGI_38856 Sequoiadendron giganteum HOM05D005827 ORTHO05D005864 2.4e-13 79.7 174 43.1
HanXRQChr16g0514881 Helianthus annuus HOM05D005827 ORTHO05D005864 6.9e-13 78.2 128 45.3
Eucgr.G01363 Eucalyptus grandis HOM05D005827 ORTHO05D005864 9.0e-13 77.8 133 44.4
Lalb_Chr21g0308391 Lupinus albus HOM05D005827 ORTHO05D005864 1.5e-12 77.0 144 41.7
CiPaw.06G170100 Carya illinoinensis HOM05D005827 ORTHO05D005864 2.6e-12 76.3 140 44.3
Cpa.g.sc246.10 Carica papaya HOM05D005827 ORTHO05D005864 5.8e-12 75.1 154 43.5
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 5.8e-12 75.1 119 42.0
Duzib132G0170 Durio zibethinus HOM05D005827 ORTHO05D005864 1.0e-11 74.3 149 46.3
Eucgr.H03226 Eucalyptus grandis HOM05D005827 ORTHO05D005864 1.0e-11 74.3 124 44.4
EL10Ac9g22299 Beta vulgaris HOM05D005827 ORTHO05D005864 1.3e-11 73.9 140 44.3
AUR62010278 Chenopodium quinoa HOM05D005827 ORTHO05D005864 1.7e-11 73.6 130 43.8
Manes.10G074300 Manihot esculenta HOM05D005827 ORTHO05D005864 1.7e-11 73.6 139 42.4
CSS0006486 Camellia sinensis var. sinensis HOM05D005827 ORTHO05D005864 2.2e-11 73.2 134 41.8
Lsat_1_v5_gn_5_114720 Lactuca sativa HOM05D005827 ORTHO05D005864 2.2e-11 73.2 138 42.8
MSTRG.27741 Avicennia marina HOM05D005827 ORTHO05D005864 3.8e-11 72.4 140 40.0
CAN.G517.16 Capsicum annuum HOM05D005827 ORTHO05D005864 3.8e-11 72.4 144 42.4
Thecc.02G106700 Theobroma cacao HOM05D005827 ORTHO05D005864 3.8e-11 72.4 139 43.9
Rhsim11G0160600 Rhododendron simsii HOM05D005827 ORTHO05D005864 5.0e-11 72.0 138 42.8
CANSAT11G0172 Cannabis sativa HOM05D005827 ORTHO05D005864 8.4e-11 71.2 125 43.2
GSVIVG01003168001 Vitis vinifera HOM05D005827 ORTHO05D005864 8.4e-11 71.2 133 43.6
PSO210G1068 Papaver somniferum HOM05D005827 ORTHO05D005864 1.1e-10 70.9 146 40.4
Gohir.D02G207600 Gossypium hirsutum HOM05D005827 ORTHO05D005864 1.4e-10 70.5 122 43.4
TWI31G0230 Tripterygium wilfordii HOM05D005827 ORTHO05D005864 1.4e-10 70.5 122 41.8
Hund00127 Selenicereus undatus HOM05D005827 ORTHO05D005864 1.9e-10 70.1 95 49.5
Sc08g0001470 Simmondsia chinensis HOM05D005827 ORTHO05D005864 1.9e-10 70.1 130 44.6
PGSC0003DMG400005012 Solanum tuberosum HOM05D005827 ORTHO05D005864 1.9e-10 70.1 155 41.9
PSO170G4182 Papaver somniferum HOM05D005827 ORTHO05D005864 2.5e-10 69.7 147 40.8
Hund00128 Selenicereus undatus HOM05D005827 ORTHO05D005864 2.5e-10 69.7 95 49.5
arahy.Tifrunner.gnm1.ann1.M92LVR Arachis hypogaea HOM05D005827 ORTHO05D005864 3.2e-10 69.3 149 37.6
BcaB07g30381 Brassica carinata HOM05D005827 ORTHO05D005864 3.2e-10 69.3 145 37.9
Hma1.2p1_0796F.1_g219120 Hydrangea macrophylla HOM05D005827 ORTHO05D005864 3.2e-10 69.3 150 40.0
HPP92_026144 Vanilla planifolia HOM05D005827 ORTHO05D005864 3.2e-10 69.3 146 40.4
Cc02_g19170 Coffea canephora HOM05D005827 ORTHO05D005864 4.2e-10 68.9 138 41.3
Haze_10160 Corylus avellana HOM05D005827 ORTHO05D005864 4.2e-10 68.9 125 42.4
Gorai.005G235500 Gossypium raimondii HOM05D005827 ORTHO05D005864 4.2e-10 68.9 123 43.9
Potri.009G097000 Populus trichocarpa HOM05D005827 ORTHO05D005864 4.2e-10 68.9 149 40.3
Aqoxy5G03364 Aquilegia oxysepala HOM05D005827 ORTHO05D005864 5.5e-10 68.6 149 43.6
Nn1g04717 Nelumbo nucifera HOM05D005827 ORTHO05D005864 5.5e-10 68.6 115 45.2
THA.LOC104823732 Tarenaya hassleriana HOM05D005827 ORTHO05D005864 5.5e-10 68.6 136 40.4
Sopen12g028550 Solanum pennellii HOM05D005827 ORTHO05D005864 7.1e-10 68.2 155 40.6
DCAR_029081 Daucus carota HOM05D005827 ORTHO05D005864 9.3e-10 67.8 128 43.0
ECA234G2840 Erigeron canadensis HOM05D005827 ORTHO05D005864 1.2e-09 67.4 132 41.7
Gohir.A03G186800 Gossypium hirsutum HOM05D005827 ORTHO05D005864 1.2e-09 67.4 133 40.6
Carub.0005s0059 Capsella rubella HOM05D005827 ORTHO05D005864 1.6e-09 67.0 140 37.1
MD08G1229200 Malus domestica HOM05D005827 ORTHO05D005864 2.1e-09 66.6 119 43.7
Solyc12g056030.2 Solanum lycopersicum HOM05D005827 ORTHO05D005864 2.7e-09 66.2 155 40.0
Migut.N01172 Erythranthe guttata HOM05D005827 ORTHO05D005864 3.5e-09 65.9 125 40.8
TAR625G0497 Trochodendron aralioides HOM05D005827 ORTHO05D005864 3.5e-09 65.9 125 40.8
TAR625G1254 Trochodendron aralioides HOM05D005827 ORTHO05D005864 3.5e-09 65.9 125 40.8
A02p32240 Brassica napus HOM05D005827 ORTHO05D005864 4.6e-09 65.5 145 36.6
BraA02t08240Z Brassica rapa HOM05D005827 ORTHO05D005864 4.6e-09 65.5 145 36.6
Dinv15756 Davidia involucrata HOM05D005827 ORTHO05D005864 4.6e-09 65.5 135 40.7
FAN04G0262 Fragaria x ananassa HOM05D005827 ORTHO05D005864 4.6e-09 65.5 136 41.9
Prupe.1G568500 Prunus persica HOM05D005827 ORTHO05D005864 4.6e-09 65.5 148 40.5
SalBow3G3341 Salvia bowleyana HOM05D005827 ORTHO05D005864 4.6e-09 65.5 158 37.3
BcaC03g17064 Brassica carinata HOM05D005827 ORTHO05D005864 6.1e-09 65.1 145 36.6
BolC2t11063H Brassica oleracea HOM05D005827 ORTHO05D005864 6.1e-09 65.1 145 36.6
Ciclev10030223m.g Citrus clementina HOM05D005827 ORTHO05D005864 7.9e-09 64.7 108 42.6
C02p49840 Brassica napus HOM05D005827 ORTHO05D005864 1.0e-08 64.3 145 36.6
QL11p034047 Quercus lobata HOM05D005827 ORTHO05D005864 1.0e-08 64.3 118 41.5
Nitab4.5_0000209g0220 Nicotiana tabacum HOM05D005827 ORTHO05D005864 1.8e-08 63.5 155 40.6
RcHm_v2.0_Chr7g0222441 Rosa chinensis HOM05D005827 ORTHO05D005864 1.8e-08 63.5 113 44.2
Zm00001eb133530 Zea mays HOM05D005827 ORTHO05D005864 1.8e-08 63.5 147 38.8
Nitab4.5_0011210g0030 Nicotiana tabacum HOM05D000771 ORTHO05D005864 2.3e-08 63.2 152 39.5
FvH4_5g29540 Fragaria vesca HOM05D005827 ORTHO05D005864 3.0e-08 62.8 112 43.8
FAN08G1793 Fragaria x ananassa HOM05D005827 ORTHO05D005864 3.0e-08 62.8 112 43.8
FAN18G4374 Fragaria x ananassa HOM05D005827 ORTHO05D005864 3.0e-08 62.8 112 43.8
MD15G1423200 Malus domestica HOM05D005827 ORTHO05D005864 3.0e-08 62.8 141 39.7
Aa31LG2G8260 Aethionema arabicum HOM05D005827 ORTHO05D005864 3.9e-08 62.4 126 38.9
Peaxi162Scf00880g00322 Petunia axillaris HOM05D005827 ORTHO05D005864 3.9e-08 62.4 155 37.4
Sed0003004 Sechium edule HOM05D005827 ORTHO05D005864 3.9e-08 62.4 137 34.3
vmacro14445 Vaccinium macrocarpon HOM05D005827 ORTHO05D005864 5.1e-08 62.0 129 44.2
Sabra09G0074600 Salix brachista HOM05D005827 ORTHO05D005864 6.7e-08 61.6 142 40.1
MELO3C003274.2 Cucumis melo HOM05D005827 ORTHO05D005864 8.7e-08 61.2 117 38.5
FAN13G0291 Fragaria x ananassa HOM05D005827 ORTHO05D005864 8.7e-08 61.2 112 42.9
Os12g0244500 Oryza sativa ssp. japonica HOM05D005827 ORTHO05D005864 1.1e-07 60.8 133 42.9
Nitab4.5_0001647g0080 Nicotiana tabacum HOM05D005827 ORTHO05D005864 1.5e-07 60.5 154 37.0
QL11p033993 Quercus lobata HOM05D005827 ORTHO05D005864 1.5e-07 60.5 117 40.2
arahy.Tifrunner.gnm1.ann1.HL4A43 Arachis hypogaea HOM05D005827 ORTHO05D005864 2.5e-07 59.7 149 34.2
Glyma.12G113700 Glycine max HOM05D005827 ORTHO05D005864 2.5e-07 59.7 157 37.6
Atru.chr5.2579 Acer truncatum HOM05D005827 ORTHO05D005864 3.3e-07 59.3 159 37.1
ClCG04G002790 Citrullus lanatus HOM05D005827 ORTHO05D005864 3.3e-07 59.3 141 37.6
AL5G10740 Arabidopsis lyrata HOM05D005827 ORTHO05D005864 4.3e-07 58.9 111 38.7
Sp2g13090 Schrenkiella parvula HOM05D005827 ORTHO05D005864 4.3e-07 58.9 155 33.5
SGA_v2.0_scaffold42G16001 Striga asiatica HOM05D005827 ORTHO05D005864 7.4e-07 58.2 98 41.8
AT2G01640 Arabidopsis thaliana HOM05D005827 ORTHO05D005864 2.8e-06 56.2 140 34.3
COL.COLO4_32605 Corchorus olitorius HOM05D005827 ORTHO05D005864 3.7e-06 55.8 156 34.6
MELO3C033554.2 Cucumis melo HOM05D005827 ORTHO05D005864 3.7e-06 55.8 100 39.0
Lj9A321T79 Lonicera japonica HOM05D005827 ORTHO05D005864 8.2e-06 54.7 105 38.1


User provided reference genes

Program Settings