Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0051s0073 Marchantia polymorpha HOM05D007614 ORTHO05D009538 0.0e+00 2927.5 1551 100.0
Pp3c13_17960 Physcomitrium patens HOM05D007614 ORTHO05D009538 0.0e+00 1113.6 1466 45.2
AagrBONN_evm.TU.Sc2ySwM_344.1704 Anthoceros agrestis HOM05D007614 ORTHO05D009538 0.0e+00 1083.6 1457 45.8
AagrBONN_evm.TU.Sc2ySwM_344.1702 Anthoceros agrestis HOM05D007614 ORTHO05D009538 2.7e-305 1052.7 1402 46.0
SEGI_15090 Sequoiadendron giganteum HOM05D007614 ORTHO05D009538 2.4e-253 880.2 1348 42.4
ATR0796G125 Amborella trichopoda HOM05D007614 ORTHO05D009538 1.1e-210 738.4 1419 35.0
MBI19_g34788_MAGBIO Magnolia biondii HOM05D007614 ORTHO05D009538 3.4e-207 726.9 1513 37.1
TAR365G0799 Trochodendron aralioides HOM05D007614 ORTHO05D009538 4.0e-200 703.4 1500 35.3
Dinv29737 Davidia involucrata HOM05D007614 ORTHO05D009538 7.0e-197 692.6 1418 35.3
QL06p010082 Quercus lobata HOM05D007614 ORTHO05D009538 4.7e-193 679.9 1433 34.7
Atru.chr6.1993 Acer truncatum HOM05D007614 ORTHO05D009538 8.0e-193 679.1 1408 35.2
GSVIVG01035126001 Vitis vinifera HOM05D007614 ORTHO05D009538 8.9e-192 675.6 1319 36.2
Nn3g21526 Nelumbo nucifera HOM05D007614 ORTHO05D009538 2.0e-191 674.5 1432 34.8
Aqoxy2G02920 Aquilegia oxysepala HOM05D007614 ORTHO05D009538 4.9e-190 669.8 1427 34.8
Ciclev10004153m.g Citrus clementina HOM05D007614 ORTHO05D009538 4.9e-190 669.8 1431 34.5
CANSAT78G1530 Cannabis sativa HOM05D007614 ORTHO05D009538 8.3e-190 669.1 1405 34.5
PSO407G0339 Papaver somniferum HOM05D007614 ORTHO05D009538 1.4e-189 668.3 1441 34.4
MD13G1166500 Malus domestica HOM05D007614 ORTHO05D009538 2.0e-188 664.5 1405 34.9
CiPaw.02G080700 Carya illinoinensis HOM05D007614 ORTHO05D009538 1.5e-186 658.3 1286 36.8
Peaxi162Scf00065g01533 Petunia axillaris HOM05D007614 ORTHO05D009538 2.5e-186 657.5 1448 34.0
Nitab4.5_0000513g0110 Nicotiana tabacum HOM05D007614 ORTHO05D009538 4.3e-186 656.8 1353 35.1
Cfa015415 Carpinus fangiana HOM05D007614 ORTHO05D009538 4.7e-185 653.3 1288 35.5
Cc03_g01650 Coffea canephora HOM05D007614 ORTHO05D009538 2.3e-184 651.0 1401 33.9
CSS0029892 Camellia sinensis var. sinensis HOM05D007614 ORTHO05D009538 4.0e-184 650.2 1492 34.0
Nitab4.5_0002628g0040 Nicotiana tabacum HOM05D007614 ORTHO05D009538 8.9e-184 649.0 1425 34.3
RcHm_v2.0_Chr4g0423071 Rosa chinensis HOM05D007614 ORTHO05D009538 8.9e-184 649.0 1437 33.6
Sopen01g028150 Solanum pennellii HOM05D007614 ORTHO05D009538 1.2e-183 648.7 1309 35.6
PGR031G0733 Punica granatum HOM05D007614 ORTHO05D009538 4.4e-183 646.7 1438 33.3
CSS0000522 Camellia sinensis var. sinensis HOM05D007614 ORTHO05D009538 1.3e-182 645.2 1485 33.8
Solyc01g066610.4 Solanum lycopersicum HOM05D007614 ORTHO05D009538 2.9e-182 644.0 1309 35.6
FAN07G2176 Fragaria x ananassa HOM05D007614 ORTHO05D009538 1.1e-181 642.1 1319 34.7
SGA_v2.0_scaffold67G22611 Striga asiatica HOM05D007614 ORTHO05D009538 9.2e-181 639.0 1464 33.6
Haze_01174 Corylus avellana HOM05D007614 ORTHO05D009538 6.0e-180 636.3 1347 34.8
SalBow2G0719 Salvia bowleyana HOM05D007614 ORTHO05D009538 1.3e-179 635.2 1453 33.3
Duzib151G0258 Durio zibethinus HOM05D007614 ORTHO05D009538 1.7e-179 634.8 1425 33.2
AT5G49110 Arabidopsis thaliana HOM05D007614 ORTHO05D009538 3.0e-179 634.0 1439 32.8
FAN12G3001 Fragaria x ananassa HOM05D007614 ORTHO05D009538 1.9e-178 631.3 1355 33.7
Oeu006410.1 Olea europaea HOM05D007614 ORTHO05D009538 1.9e-178 631.3 1445 33.6
FvH4_4g18510 Fragaria vesca HOM05D007614 ORTHO05D009538 1.6e-177 628.2 1262 34.9
Potri.010G011800 Populus trichocarpa HOM05D007614 ORTHO05D009538 4.7e-177 626.7 1465 32.6
FAN12G0400 Fragaria x ananassa HOM05D007614 ORTHO05D009538 6.2e-177 626.3 1349 33.6
Gorai.006G076700 Gossypium raimondii HOM05D007614 ORTHO05D009538 1.1e-176 625.5 1393 33.2
Thhalv10003518m.g Eutrema salsugineum HOM05D007614 ORTHO05D009538 2.3e-176 624.4 1456 33.2
FAN17G0278 Fragaria x ananassa HOM05D007614 ORTHO05D009538 3.1e-176 624.0 1249 35.1
A02p37890 Brassica napus HOM05D007614 ORTHO05D009538 6.8e-176 622.9 1488 33.1
BolC2t11775H Brassica oleracea HOM05D007614 ORTHO05D009538 1.9e-173 614.8 1359 34.3
Lj3C822G9 Lonicera japonica HOM05D007614 ORTHO05D009538 5.4e-173 613.2 1270 35.7
CARHR182630 Cardamine hirsuta HOM05D007614 ORTHO05D009538 2.1e-172 611.3 1459 32.6
Sabra10G0007500 Salix brachista HOM05D007614 ORTHO05D009538 3.5e-172 610.5 1332 33.8
C02p57050 Brassica napus HOM05D007614 ORTHO05D009538 1.3e-171 608.6 1338 34.2
TWI73G0642 Tripterygium wilfordii HOM05D007614 ORTHO05D009538 1.3e-171 608.6 1378 34.1
Sc13g0003320 Simmondsia chinensis HOM05D007614 ORTHO05D009538 1.9e-170 604.7 1430 33.2
AL8G22620 Arabidopsis lyrata HOM05D007614 ORTHO05D009538 5.6e-170 603.2 1444 32.5
THA.LOC104827336 Tarenaya hassleriana HOM05D007614 ORTHO05D009538 6.2e-169 599.7 1494 32.7
BcaB07g34217 Brassica carinata HOM05D007614 ORTHO05D009538 2.4e-168 597.8 1493 32.4
BraA02t08773Z Brassica rapa HOM05D007614 ORTHO05D009538 8.9e-168 595.9 1493 32.5
HPP92_013726 Vanilla planifolia HOM05D007614 ORTHO05D009538 1.5e-167 595.1 1400 32.5
DCAR_027058 Daucus carota HOM05D007614 ORTHO05D009538 9.9e-167 592.4 1228 35.3
CBR_g12376 Chara braunii HOM05D007614 ORTHO05D009538 4.9e-166 590.1 1702 30.3
Lsat_1_v5_gn_6_96381 Lactuca sativa HOM05D007614 ORTHO05D009538 5.1e-163 580.1 1405 32.4
COL.COLO4_37910 Corchorus olitorius HOM05D007614 ORTHO05D009538 4.3e-162 577.0 1527 31.2
ECA240G3304 Erigeron canadensis HOM05D007614 ORTHO05D009538 1.3e-155 555.4 1252 34.3
BcaC03g17700 Brassica carinata HOM05D007614 ORTHO05D009538 1.4e-149 535.4 1361 32.7
PGSC0003DMG400011332 Solanum tuberosum HOM05D007614 ORTHO05D009538 5.4e-149 533.5 1212 33.6
Prupe.1G132900 Prunus persica HOM05D007614 ORTHO05D009538 1.1e-146 525.8 1095 34.6
Zm00001eb016350 Zea mays HOM05D007614 ORTHO05D009538 9.6e-146 522.7 1272 32.2
Eucgr.B01588 Eucalyptus grandis HOM05D007614 ORTHO05D009538 2.4e-136 491.5 1226 30.4
Gohir.D09G062000 Gossypium hirsutum HOM05D007614 ORTHO05D009538 2.9e-134 484.6 1018 34.9
Gohir.A09G063000 Gossypium hirsutum HOM05D007614 ORTHO05D009538 3.8e-134 484.2 1014 34.7
Thecc.04G287600 Theobroma cacao HOM05D007614 ORTHO05D009538 8.4e-134 483.0 1054 35.4
Manes.03G197500 Manihot esculenta HOM05D007614 ORTHO05D009538 1.1e-128 466.1 1202 29.9
Hma1.2p1_1807F.1_g303400 Hydrangea macrophylla HOM05D007614 ORTHO05D009538 7.2e-125 453.4 874 36.7
Cpa.g.sc16.197 Carica papaya HOM05D007614 ORTHO05D009538 1.6e-124 452.2 1058 33.1
Hma1.2p1_0804F.1_g220930 Hydrangea macrophylla HOM05D007614 ORTHO05D009538 3.8e-118 431.0 882 35.5
CDE01G0153 Ceratophyllum demersum HOM05D007614 ORTHO05D009538 1.3e-110 406.0 1439 26.8
Migut.G00138 Erythranthe guttata HOM05D007614 ORTHO05D009538 1.1e-101 376.3 766 35.2
HanXRQChr03g0089461 Helianthus annuus HOM05D007614 ORTHO05D009538 1.6e-92 345.9 605 37.4
BcaC03g17696 Brassica carinata HOM05D007614 ORTHO05D009538 3.4e-90 338.2 812 32.6
Actinidia00005 Actinidia chinensis HOM05D007614 ORTHO05D009538 1.9e-85 322.4 738 32.1
CAN.G421.11 Capsicum annuum HOM05D007614 ORTHO05D009538 7.1e-64 250.8 967 27.0
BcaC03g17697 Brassica carinata HOM05D007614 ORTHO05D009538 2.8e-60 238.8 358 40.5
HanXRQChr03g0089481 Helianthus annuus HOM05D007614 ORTHO05D009538 1.1e-48 200.3 302 42.1
MSTRG.3900 Avicennia marina HOM05D007614 ORTHO05D009538 8.1e-44 184.1 421 32.8
CAN.G421.12 Capsicum annuum HOM05D007614 ORTHO05D009538 1.5e-42 179.9 283 43.5
Migut.G00137 Erythranthe guttata HOM05D007614 ORTHO05D009538 5.4e-40 171.4 645 27.4
Cpa.g.c41899 Carica papaya HOM05D007614 ORTHO05D009538 3.6e-36 158.7 189 48.7
Cc01_g15100 Coffea canephora HOM05D007614 ORTHO05D009538 1.5e-34 153.3 155 52.9
BcaB01g01537 Brassica carinata HOM05D007614 ORTHO05D009538 1.3e-28 133.7 350 29.7
Cre07.g314700 Chlamydomonas reinhardtii HOM05D058327 ORTHO05D009538 2.1e-28 132.9 826 22.8
Eucgr.B01587 Eucalyptus grandis HOM05D007614 ORTHO05D009538 2.6e-26 125.9 118 58.5
Actinidia14288 Actinidia chinensis HOM05D007614 ORTHO05D009538 7.9e-15 87.8 128 41.4
BcaB04g20478 Brassica carinata HOM05D007614 ORTHO05D009538 1.9e-13 83.2 120 45.8
Actinidia27756 Actinidia chinensis HOM05D007614 ORTHO05D009538 2.5e-13 82.8 94 46.8
Os03g0341200 Oryza sativa ssp. japonica HOM05D007614 ORTHO05D009538 2.4e-11 76.3 148 39.2


User provided reference genes

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