Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 4.1e-72 274.6 138 100.0
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 1.8e-43 179.5 135 63.7
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 6.8e-43 177.6 135 63.0
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 6.3e-41 171.0 128 60.2
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 7.7e-39 164.1 131 58.8
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 1.3e-33 146.7 138 54.3
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 1.3e-33 146.7 124 57.3
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 1.7e-33 146.4 138 52.9
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 2.2e-33 146.0 139 53.2
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 2.8e-33 145.6 111 58.6
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 3.7e-33 145.2 107 62.6
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 4.9e-33 144.8 99 66.7
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 4.9e-33 144.8 99 66.7
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 4.9e-33 144.8 100 64.0
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 8.3e-33 144.1 139 50.4
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 8.3e-33 144.1 101 64.4
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 8.3e-33 144.1 100 64.0
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 1.1e-32 143.7 100 62.0
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 1.1e-32 143.7 105 61.0
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 1.1e-32 143.7 101 64.4
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 1.4e-32 143.3 100 66.0
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 1.4e-32 143.3 106 63.2
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 1.8e-32 142.9 102 65.7
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 1.8e-32 142.9 102 65.7
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 1.8e-32 142.9 100 65.0
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 1.8e-32 142.9 100 64.0
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 2.4e-32 142.5 99 66.7
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 2.4e-32 142.5 100 65.0
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 2.4e-32 142.5 99 65.7
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 3.1e-32 142.1 101 62.4
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 3.1e-32 142.1 101 63.4
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 3.1e-32 142.1 101 63.4
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 3.1e-32 142.1 101 62.4
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 3.1e-32 142.1 101 63.4
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 3.1e-32 142.1 101 63.4
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 3.1e-32 142.1 101 63.4
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 3.1e-32 142.1 101 62.4
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 3.1e-32 142.1 101 62.4
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 4.1e-32 141.7 127 53.5
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 4.1e-32 141.7 127 53.5
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 4.1e-32 141.7 127 53.5
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 4.1e-32 141.7 112 58.9
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 4.1e-32 141.7 100 65.0
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 4.1e-32 141.7 100 65.0
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 4.1e-32 141.7 101 62.4
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 5.4e-32 141.4 101 61.4
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 5.4e-32 141.4 135 51.9
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 5.4e-32 141.4 100 65.0
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 5.4e-32 141.4 102 65.7
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 5.4e-32 141.4 101 62.4
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 7.0e-32 141.0 133 52.6
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 7.0e-32 141.0 100 63.0
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 9.1e-32 140.6 101 61.4
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 9.1e-32 140.6 132 53.8
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 1.6e-31 139.8 100 62.0
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 2.0e-31 139.4 100 62.0
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 2.7e-31 139.0 109 55.0
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 3.5e-31 138.7 101 62.4
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 3.5e-31 138.7 100 62.0
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 3.5e-31 138.7 102 60.8
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 5.9e-31 137.9 101 58.4
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 5.9e-31 137.9 115 56.5
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 5.9e-31 137.9 115 53.9
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 7.7e-31 137.5 100 61.0
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 7.7e-31 137.5 100 63.0
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 1.0e-30 137.1 134 52.2
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 1.0e-30 137.1 136 52.2
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 1.3e-30 136.7 96 64.6
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 1.7e-30 136.3 100 61.0
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 1.7e-30 136.3 102 63.7
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 1.7e-30 136.3 99 61.6
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 2.9e-30 135.6 99 61.6
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 2.9e-30 135.6 99 61.6
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 2.9e-30 135.6 96 65.6
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 6.6e-30 134.4 99 61.6
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 6.6e-30 134.4 107 57.9
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 6.6e-30 134.4 99 59.6
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 8.6e-30 134.0 107 57.9
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 1.5e-29 133.3 98 62.2
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 1.9e-29 132.9 102 59.8
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 1.9e-29 132.9 121 54.5
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 2.5e-29 132.5 121 53.7
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 2.5e-29 132.5 98 61.2
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 3.3e-29 132.1 100 58.0
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 3.3e-29 132.1 99 58.6
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 3.3e-29 132.1 127 53.5
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 4.2e-29 131.7 96 59.4
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 4.2e-29 131.7 104 55.8
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 4.2e-29 131.7 99 58.6
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 5.5e-29 131.3 130 52.3
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 7.2e-29 131.0 105 58.1
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 9.5e-29 130.6 106 57.5
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 9.5e-29 130.6 106 54.7
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 9.5e-29 130.6 100 57.0
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 1.2e-28 130.2 100 55.0
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 1.2e-28 130.2 100 55.0
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 1.2e-28 130.2 125 56.0
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 1.6e-28 129.8 104 55.8
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 1.6e-28 129.8 125 55.2
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 2.8e-28 129.0 107 54.2
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 8.0e-28 127.5 107 55.1
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 1.0e-27 127.1 101 58.4
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 1.0e-27 127.1 104 54.8
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 1.4e-27 126.7 100 54.0
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 1.4e-27 126.7 100 54.0
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 3.0e-27 125.6 127 46.5
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 3.0e-27 125.6 100 55.0
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 4.0e-27 125.2 113 54.9
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 4.0e-27 125.2 102 52.9
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 5.2e-27 124.8 140 47.9
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 2.6e-26 122.5 89 60.7
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 3.7e-25 118.6 74 66.2
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 1.1e-24 117.1 105 55.2
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 1.1e-24 117.1 105 55.2
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 4.6e-23 111.7 95 50.5
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 7.3e-21 104.4 130 42.3
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 1.0e-19 100.5 83 50.6
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 8.9e-19 97.4 72 51.4
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 1.2e-18 97.1 75 58.7
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 1.2e-18 97.1 103 41.7
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 2.2e-17 92.8 75 56.0
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 1.6e-15 86.7 74 50.0
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 3.1e-11 72.4 49 59.2
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 2.2e-09 66.2 42 66.7
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 3.2e-08 62.4 40 67.5


User provided reference genes

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