Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0051s0054 Marchantia polymorpha HOM05D006797 ORTHO05D007696 9.8e-60 233.4 130 100.0
Pp3c24_14860 Physcomitrium patens HOM05D006797 ORTHO05D007696 1.1e-18 97.1 127 55.1
AagrBONN_evm.TU.Sc2ySwM_117.639 Anthoceros agrestis HOM05D006797 ORTHO05D007696 9.0e-13 77.4 142 44.4
Phvul.002G187600 Phaseolus vulgaris HOM05D006797 ORTHO05D007696 8.4e-11 70.9 129 41.9
VMungo0251G2933 Vigna mungo HOM05D006797 ORTHO05D007696 7.1e-10 67.8 108 44.4
ClCG01G025860 Citrullus lanatus HOM05D006797 ORTHO05D007696 2.1e-09 66.2 126 42.1
Glyma.05G134500 Glycine max HOM05D006797 ORTHO05D007696 2.1e-09 66.2 127 40.2
CDE05G1867 Ceratophyllum demersum HOM05D006797 ORTHO05D007696 3.5e-09 65.5 129 39.5
TPR.G27392 Trifolium pratense HOM05D006797 ORTHO05D007696 1.0e-08 63.9 66 53.0
Glyma.08G089600 Glycine max HOM05D006797 ORTHO05D007696 1.7e-08 63.2 125 41.6
Sed0011432 Sechium edule HOM05D006797 ORTHO05D007696 2.3e-08 62.8 126 41.3
Ca_18220_v3 Cicer arietinum L. HOM05D006797 ORTHO05D007696 3.0e-08 62.4 52 63.5
Lj4g0013366 Lotus japonicus HOM05D006797 ORTHO05D007696 3.9e-08 62.0 48 64.6
MBI18_g20922_MAGBIO Magnolia biondii HOM05D006797 ORTHO05D007696 3.9e-08 62.0 48 64.6
Medtr4g094782 Medicago truncatula HOM05D006797 ORTHO05D007696 3.9e-08 62.0 47 63.8
TAR626G0010 Trochodendron aralioides HOM05D006797 ORTHO05D007696 3.9e-08 62.0 130 43.1
MD10G1226000 Malus domestica HOM05D006797 ORTHO05D007696 5.1e-08 61.6 128 39.8
CiPaw.10G107100 Carya illinoinensis HOM05D006797 ORTHO05D007696 6.6e-08 61.2 109 40.4
Haze_05201 Corylus avellana HOM05D000001 ORTHO05D010268 6.6e-08 61.2 45 68.9
Haze_15747 Corylus avellana HOM05D006797 ORTHO05D007696 6.6e-08 61.2 45 68.9
Hund23985 Selenicereus undatus HOM05D006797 ORTHO05D007696 6.6e-08 61.2 109 39.4
Prupe.4G119300 Prunus persica HOM05D006797 ORTHO05D007696 1.1e-07 60.5 111 43.2
MELO3C007002.2 Cucumis melo HOM05D006797 ORTHO05D007696 1.5e-07 60.1 126 38.1
AUR62042807 Chenopodium quinoa HOM05D006797 ORTHO05D007696 2.5e-07 59.3 45 64.4
Sc24g0002860 Simmondsia chinensis HOM05D006797 ORTHO05D007696 2.5e-07 59.3 126 37.3
vmacro03563 Vaccinium macrocarpon HOM05D006797 ORTHO05D007696 2.5e-07 59.3 55 56.4
Migut.F00519 Erythranthe guttata HOM05D006797 ORTHO05D007696 4.3e-07 58.5 127 42.5
FvH4_3g13200 Fragaria vesca HOM05D006797 ORTHO05D007696 5.6e-07 58.2 45 64.4
FAN11G3985 Fragaria x ananassa HOM05D006797 ORTHO05D007696 5.6e-07 58.2 45 64.4
FAN16G2513 Fragaria x ananassa HOM05D006797 ORTHO05D007696 5.6e-07 58.2 45 64.4
FAN21G4013 Fragaria x ananassa HOM05D006797 ORTHO05D007696 5.6e-07 58.2 45 64.4
SalBow3G3973 Salvia bowleyana HOM05D006797 ORTHO05D007696 5.6e-07 58.2 120 40.8
Zm00001eb442340 Zea mays HOM05D006797 ORTHO05D007696 5.6e-07 58.2 107 40.2
CsaV3_6G053080 Cucumis sativus L. HOM05D006797 ORTHO05D007696 7.3e-07 57.8 126 39.7
Dinv02379 Davidia involucrata HOM05D006797 ORTHO05D007696 7.3e-07 57.8 47 63.8
Duzib211G0055 Durio zibethinus HOM05D006797 ORTHO05D007696 7.3e-07 57.8 125 40.8
Manes.03G071800 Manihot esculenta HOM05D006797 ORTHO05D007696 7.3e-07 57.8 121 41.3
CSS0049260 Camellia sinensis var. sinensis HOM05D006797 ORTHO05D007696 9.6e-07 57.4 124 42.7
Zm00001eb430680 Zea mays HOM05D006797 ORTHO05D007696 9.6e-07 57.4 130 36.9
arahy.Tifrunner.gnm1.ann1.30I9D2 Arachis hypogaea HOM05D006797 ORTHO05D007696 1.3e-06 57.0 128 37.5
arahy.Tifrunner.gnm1.ann1.3X9X11 Arachis hypogaea HOM05D006797 ORTHO05D007696 1.3e-06 57.0 128 37.5
Lalb_Chr07g0188191 Lupinus albus HOM05D006797 ORTHO05D007696 1.3e-06 57.0 127 40.2
HPP92_013198 Vanilla planifolia HOM05D006797 ORTHO05D007696 1.3e-06 57.0 126 39.7
ATR0763G022 Amborella trichopoda HOM05D006797 ORTHO05D007696 1.6e-06 56.6 130 39.2
Gohir.A06G110200 Gossypium hirsutum HOM05D006797 ORTHO05D007696 1.6e-06 56.6 129 38.0
Oeu036765.2 Olea europaea HOM05D006797 ORTHO05D007696 1.6e-06 56.6 139 38.8
QL11p011767 Quercus lobata HOM05D006797 ORTHO05D007696 2.1e-06 56.2 129 39.5
Zm00001eb071100 Zea mays HOM05D006797 ORTHO05D007696 2.1e-06 56.2 132 37.1
EL10Ac7g17249 Beta vulgaris HOM05D006797 ORTHO05D007696 2.8e-06 55.8 109 42.2
Dinv03172 Davidia involucrata HOM05D006797 ORTHO05D007696 3.6e-06 55.5 45 62.2
Gorai.010G130400 Gossypium raimondii HOM05D006797 ORTHO05D007696 3.6e-06 55.5 132 37.9
CANSAT35G2044 Cannabis sativa HOM05D006797 ORTHO05D007696 4.8e-06 55.1 112 38.4
SMO167G0044 Selaginella moellendorffii HOM05D006797 ORTHO05D007696 4.8e-06 55.1 127 39.4
RcHm_v2.0_Chr5g0021541 Rosa chinensis HOM05D006797 ORTHO05D007696 6.2e-06 54.7 125 37.6
Thecc.02G002300 Theobroma cacao HOM05D006797 ORTHO05D007696 6.2e-06 54.7 88 43.2
unitig_37.g11921 Utricularia gibba HOM05D006797 ORTHO05D007696 6.2e-06 54.7 59 50.8
GSVIVG01012170001 Vitis vinifera HOM05D006797 ORTHO05D007696 6.2e-06 54.7 131 38.9
Gohir.D06G114100 Gossypium hirsutum HOM05D006797 ORTHO05D007696 8.1e-06 54.3 132 37.1
Psat7g087040 Pisum sativum HOM05D006797 ORTHO05D007696 8.1e-06 54.3 131 36.6


User provided reference genes

Program Settings