Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 0.0e+00 1141.7 577 100.0
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 7.0e-126 455.3 531 46.5
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 3.9e-84 316.6 444 40.8
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 6.4e-79 299.3 443 39.3
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 7.1e-78 295.8 437 40.3
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 9.3e-78 295.4 445 40.4
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 1.2e-77 295.0 446 39.2
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 2.1e-77 294.3 445 40.4
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 4.6e-77 293.1 446 39.2
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 6.0e-77 292.7 445 40.2
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 1.0e-76 292.0 445 39.1
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 8.7e-76 288.9 470 36.8
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 2.5e-75 287.3 444 38.1
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 4.3e-75 286.6 443 37.7
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 2.8e-74 283.9 449 39.4
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 2.8e-74 283.9 444 38.3
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 2.8e-74 283.9 254 55.5
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 3.7e-74 283.5 464 36.4
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 1.1e-73 282.0 446 36.5
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 1.1e-73 282.0 445 36.9
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 1.1e-73 282.0 443 37.7
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 1.4e-73 281.6 446 35.9
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 1.8e-73 281.2 441 37.6
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 1.8e-73 281.2 304 49.7
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 2.4e-73 280.8 446 36.5
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 3.1e-73 280.4 445 37.8
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 4.0e-73 280.0 444 38.5
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 5.3e-73 279.6 445 39.3
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 5.3e-73 279.6 443 37.5
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 6.9e-73 279.3 443 37.5
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 6.9e-73 279.3 443 38.4
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 9.0e-73 278.9 485 37.3
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 9.0e-73 278.9 301 49.5
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 9.0e-73 278.9 444 38.5
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 9.0e-73 278.9 440 38.0
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 2.0e-72 277.7 313 46.3
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.6e-72 277.3 453 39.1
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 4.5e-72 276.6 459 37.7
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 4.5e-72 276.6 446 37.7
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 4.5e-72 276.6 450 39.6
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 5.8e-72 276.2 444 36.9
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 5.8e-72 276.2 445 36.4
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 5.8e-72 276.2 489 37.2
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 9.9e-72 275.4 444 36.7
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 1.3e-71 275.0 254 54.3
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 1.3e-71 275.0 250 53.6
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 1.7e-71 274.6 444 36.9
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 1.7e-71 274.6 446 37.4
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 1.7e-71 274.6 446 37.7
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 2.2e-71 274.2 448 36.2
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 2.9e-71 273.9 313 46.3
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 2.9e-71 273.9 283 49.8
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 2.9e-71 273.9 445 37.5
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 3.8e-71 273.5 444 37.4
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 3.8e-71 273.5 250 54.0
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 3.8e-71 273.5 292 48.3
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 3.8e-71 273.5 443 38.4
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 3.8e-71 273.5 254 53.5
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 4.9e-71 273.1 271 50.9
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 6.4e-71 272.7 247 54.7
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 6.4e-71 272.7 446 37.0
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 6.4e-71 272.7 407 38.8
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 1.4e-70 271.6 250 53.2
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 1.4e-70 271.6 443 35.9
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 1.4e-70 271.6 444 36.3
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 1.4e-70 271.6 443 37.0
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 3.2e-70 270.4 329 45.9
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 7.1e-70 269.2 250 53.2
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 7.1e-70 269.2 250 52.8
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 7.1e-70 269.2 257 52.9
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 7.1e-70 269.2 287 49.5
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 7.1e-70 269.2 446 36.3
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 7.1e-70 269.2 448 35.9
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 1.2e-69 268.5 445 36.9
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 1.6e-69 268.1 445 37.3
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 2.1e-69 267.7 453 38.0
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 7.9e-69 265.8 258 53.1
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 1.0e-68 265.4 250 52.8
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 1.3e-68 265.0 266 50.4
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 1.8e-68 264.6 455 35.8
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 2.3e-68 264.2 394 38.3
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 3.9e-68 263.5 252 52.4
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 5.1e-68 263.1 408 38.0
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 1.1e-67 261.9 434 37.3
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 1.1e-67 261.9 446 36.1
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 1.9e-67 261.2 267 50.2
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 3.3e-67 260.4 271 49.8
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 4.3e-67 260.0 250 52.8
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 9.6e-67 258.8 293 46.4
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 1.3e-66 258.5 443 35.4
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 1.6e-66 258.1 436 37.2
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 8.2e-66 255.8 394 36.0
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 1.1e-65 255.4 451 37.3
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 2.4e-65 254.2 296 50.3
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 4.0e-65 253.4 265 49.1
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 6.9e-65 252.7 443 36.6
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.9e-63 247.3 415 37.8
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 2.9e-63 247.3 454 37.2
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 3.8e-63 246.9 254 50.8
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 2.5e-62 244.2 469 35.0
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 3.5e-61 240.4 453 36.4
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 2.5e-59 234.2 229 49.8
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 2.2e-47 194.5 233 44.2
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 5.1e-44 183.3 443 30.7
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 8.8e-44 182.6 277 38.6
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 1.5e-43 181.8 511 28.8
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 5.3e-41 173.3 208 45.2
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 1.0e-39 169.1 155 54.2
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 1.1e-38 165.6 155 53.5
Atru.chr2.1886 Acer truncatum HOM05D006002 ORTHO05D007651 1.2e-37 162.2 327 32.4
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 6.1e-37 159.8 318 36.2
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 2.6e-35 154.5 165 47.9
Cfa022974 Carpinus fangiana HOM05D006002 ORTHO05D007651 1.2e-32 145.6 312 31.7
SEGI_15629 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 1.2e-32 145.6 131 53.4
Oeu052016.1 Olea europaea HOM05D006002 ORTHO05D007651 4.5e-32 143.7 312 32.4
Cpa.g.sc42.79 Carica papaya HOM05D006002 ORTHO05D007651 5.9e-32 143.3 307 31.9
Cpa.g.sc42.82 Carica papaya HOM05D006002 ORTHO05D007651 2.9e-31 141.0 134 52.2
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 1.9e-30 138.3 138 47.8
Zm00001eb031660 Zea mays HOM05D006002 ORTHO05D007651 1.9e-30 138.3 143 49.0
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 4.0e-28 130.6 118 51.7
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 2.0e-27 128.3 117 51.3
MD05G1214300 Malus domestica HOM05D006002 ORTHO05D007651 8.3e-26 122.9 110 58.2
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 2.4e-25 121.3 298 31.2
COL.COLO4_30126 Corchorus olitorius HOM05D006002 ORTHO05D007651 7.5e-19 99.8 96 51.0
BcaB04g17517 Brassica carinata HOM05D006002 ORTHO05D007651 1.4e-17 95.5 94 51.1
QL04p088694 Quercus lobata HOM05D006002 ORTHO05D007651 3.5e-16 90.9 126 38.9
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 1.9e-14 85.1 126 38.9
QL04p089868 Quercus lobata HOM05D006002 ORTHO05D007651 9.5e-14 82.8 59 59.3
QL03p043192 Quercus lobata HOM05D006002 ORTHO05D007651 1.0e-12 79.3 63 52.4
Cfa023409 Carpinus fangiana HOM05D006002 ORTHO05D126491 1.7e-07 62.0 201 30.3


User provided reference genes

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