Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 3.8e-174 614.8 319 100.0
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 9.6e-93 344.4 279 60.6
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 3.0e-86 322.8 329 52.6
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 1.1e-72 277.7 277 52.7
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 2.5e-72 276.6 294 53.1
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 3.2e-72 276.2 277 52.7
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 5.5e-72 275.4 278 52.5
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 9.4e-72 274.6 284 51.4
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 1.6e-71 273.9 275 51.3
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 2.7e-71 273.1 289 50.5
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 2.7e-71 273.1 289 50.5
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 2.7e-71 273.1 284 50.7
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 6.1e-71 271.9 291 48.5
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 6.1e-71 271.9 328 45.7
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 1.0e-70 271.2 266 53.0
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 1.4e-70 270.8 295 49.2
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 1.4e-70 270.8 331 45.9
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 1.8e-70 270.4 266 53.0
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 1.8e-70 270.4 324 45.7
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 2.3e-70 270.0 289 50.2
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 2.3e-70 270.0 284 50.4
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 3.0e-70 269.6 284 51.4
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 3.0e-70 269.6 290 50.3
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 5.1e-70 268.9 295 48.5
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 5.1e-70 268.9 277 49.8
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 6.7e-70 268.5 276 51.1
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 8.8e-70 268.1 276 49.3
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 1.5e-69 267.3 317 47.0
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 2.0e-69 266.9 284 51.1
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 2.6e-69 266.5 317 46.7
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 4.4e-69 265.8 325 46.8
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 7.4e-69 265.0 315 47.6
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 9.7e-69 264.6 323 44.9
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 9.7e-69 264.6 284 49.3
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.3e-68 264.2 300 46.3
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 1.7e-68 263.8 283 50.5
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 2.8e-68 263.1 262 52.7
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 3.7e-68 262.7 277 51.3
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 3.7e-68 262.7 276 50.0
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 3.7e-68 262.7 312 48.1
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 3.7e-68 262.7 262 51.9
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 4.8e-68 262.3 284 48.9
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 4.8e-68 262.3 277 49.1
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 8.2e-68 261.5 275 49.5
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 1.1e-67 261.2 284 49.3
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 1.4e-67 260.8 283 48.1
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 1.4e-67 260.8 299 48.5
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 1.4e-67 260.8 262 51.1
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 1.8e-67 260.4 269 49.4
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 2.4e-67 260.0 284 48.6
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 3.1e-67 259.6 256 50.8
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 3.1e-67 259.6 260 50.4
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 4.1e-67 259.2 256 50.4
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 4.1e-67 259.2 260 49.6
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 4.1e-67 259.2 277 48.7
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 4.1e-67 259.2 269 49.8
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 5.3e-67 258.8 277 48.7
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 5.3e-67 258.8 273 48.4
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 7.0e-67 258.5 274 50.0
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 7.0e-67 258.5 266 51.5
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 9.1e-67 258.1 275 50.2
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 1.2e-66 257.7 269 49.8
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 1.2e-66 257.7 277 48.0
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 1.2e-66 257.7 284 48.6
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 2.0e-66 256.9 284 47.9
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 2.6e-66 256.5 283 48.4
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 4.5e-66 255.8 284 46.8
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 4.5e-66 255.8 279 49.5
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 5.9e-66 255.4 276 48.9
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.3e-65 254.2 243 51.0
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 1.3e-65 254.2 259 48.3
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 1.7e-65 253.8 262 50.8
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 5.0e-65 252.3 318 45.3
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 5.0e-65 252.3 311 45.7
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 6.5e-65 251.9 276 48.6
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 6.5e-65 251.9 312 45.5
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 1.9e-64 250.4 268 50.0
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 3.2e-64 249.6 323 45.5
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 3.2e-64 249.6 292 45.2
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 3.2e-64 249.6 279 47.0
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 4.2e-64 249.2 251 50.6
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 4.2e-64 249.2 257 49.4
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 9.4e-64 248.1 248 52.4
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 9.4e-64 248.1 241 53.5
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 3.6e-63 246.1 288 46.2
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 1.8e-62 243.8 244 52.5
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 2.3e-62 243.4 286 46.9
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 3.0e-62 243.0 298 44.3
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 5.2e-62 242.3 241 50.6
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 2.0e-61 240.4 282 46.5
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 7.5e-61 238.4 233 55.4
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 1.3e-60 237.7 276 47.8
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 2.2e-60 236.9 264 49.6
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 1.2e-58 231.1 263 47.9
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 3.5e-58 229.6 218 54.1
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 4.5e-58 229.2 218 53.2
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 2.7e-55 219.9 240 48.8
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 1.3e-52 211.1 290 42.1
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 9.1e-51 204.9 231 49.8
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 2.0e-50 203.8 264 45.5
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 3.5e-50 203.0 265 44.5
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 7.7e-50 201.8 283 38.5
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 6.5e-49 198.7 223 47.5
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 1.0e-46 191.4 323 37.5
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 1.1e-40 171.4 148 59.5
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 4.9e-36 156.0 181 45.3
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 1.9e-27 127.5 187 38.5
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 6.0e-26 122.5 133 45.9
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 3.6e-23 113.2 83 66.3
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 1.1e-22 111.7 83 66.3
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 3.2e-19 100.1 76 64.5
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 4.1e-19 99.8 109 44.0
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 5.1e-17 92.8 269 30.1
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 6.8e-14 82.4 63 61.9
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 3.4e-13 80.1 61 60.7
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.2e-12 77.4 64 56.2
BcaC05g28656 Brassica carinata HOM05D022203 ORTHO05D024331 6.8e-06 55.8 36 69.4


User provided reference genes

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