Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0051s0007 Marchantia polymorpha HOM05D003848 ORTHO05D004616 6.2e-110 401.7 389 100.0
AagrBONN_evm.TU.Sc2ySwM_362.1784 Anthoceros agrestis HOM05D003848 ORTHO05D004616 2.0e-76 290.4 156 94.2
Pp3c9_17960 Physcomitrium patens HOM05D003848 ORTHO05D004616 1.9e-74 283.9 161 89.4
SEGI_20713 Sequoiadendron giganteum HOM05D003848 ORTHO05D004616 1.8e-72 277.3 157 89.8
ATR0332G007 Amborella trichopoda HOM05D003848 ORTHO05D004616 2.3e-72 276.9 174 82.2
CANSAT01G1819 Cannabis sativa HOM05D003848 ORTHO05D004616 2.3e-72 276.9 154 90.9
SMO231G0049 Selaginella moellendorffii HOM05D003848 ORTHO05D004616 3.9e-72 276.2 170 85.3
SMO351G0411 Selaginella moellendorffii HOM05D003848 ORTHO05D004616 5.1e-72 275.8 170 85.3
ATR0824G270 Amborella trichopoda HOM05D003848 ORTHO05D004616 8.8e-72 275.0 155 89.0
Cfa006159 Carpinus fangiana HOM05D003848 ORTHO05D004616 4.3e-71 272.7 164 83.5
Haze_04691 Corylus avellana HOM05D003848 ORTHO05D004616 9.7e-71 271.6 161 84.5
Cfa003508 Carpinus fangiana HOM05D003848 ORTHO05D004616 1.3e-70 271.2 164 83.5
Potri.002G051500 Populus trichocarpa HOM05D003848 ORTHO05D004616 1.3e-70 271.2 164 83.5
Sabra05G0161100 Salix brachista HOM05D003848 ORTHO05D004616 1.7e-70 270.8 164 82.3
Haze_16066 Corylus avellana HOM05D003848 ORTHO05D004616 2.2e-70 270.4 164 83.5
Potri.005G210900 Populus trichocarpa HOM05D003848 ORTHO05D004616 2.8e-70 270.0 164 83.5
AagrBONN_evm.TU.Sc2ySwM_344.5133 Anthoceros agrestis HOM05D003848 ORTHO05D004616 3.7e-70 269.6 144 94.4
CiPaw.08G106300 Carya illinoinensis HOM05D003848 ORTHO05D004616 3.7e-70 269.6 171 83.0
COL.COLO4_09072 Corchorus olitorius HOM05D003848 ORTHO05D004616 3.7e-70 269.6 155 87.7
QL01p012613 Quercus lobata HOM05D003848 ORTHO05D004616 6.3e-70 268.9 154 88.3
Atru.chr5.1462 Acer truncatum HOM05D003848 ORTHO05D004616 8.2e-70 268.5 156 85.9
FvH4_4g12190 Fragaria vesca HOM05D003848 ORTHO05D004616 1.1e-69 268.1 159 84.9
FAN07G0259 Fragaria x ananassa HOM05D003848 ORTHO05D004616 1.1e-69 268.1 159 84.9
FAN22G1557 Fragaria x ananassa HOM05D003848 ORTHO05D004616 1.1e-69 268.1 159 84.9
RcHm_v2.0_Chr4g0409951 Rosa chinensis HOM05D003848 ORTHO05D004616 1.1e-69 268.1 159 84.9
THA.LOC104801238 Tarenaya hassleriana HOM05D003848 ORTHO05D004616 1.1e-69 268.1 154 88.3
HPP92_009020 Vanilla planifolia HOM05D003848 ORTHO05D004616 1.1e-69 268.1 164 83.5
Cpa.g.sc52.49 Carica papaya HOM05D003848 ORTHO05D004616 1.4e-69 267.7 164 84.1
VMungo0720G2447 Vigna mungo HOM05D003848 ORTHO05D004616 1.4e-69 267.7 177 78.5
Ciclev10019827m.g Citrus clementina HOM05D003848 ORTHO05D004616 1.8e-69 267.3 154 87.7
FAN17G2080 Fragaria x ananassa HOM05D003848 ORTHO05D004616 1.8e-69 267.3 158 84.8
TPR.G28157 Trifolium pratense HOM05D003848 ORTHO05D004616 1.8e-69 267.3 154 88.3
Glyma.10G027400 Glycine max HOM05D003848 ORTHO05D004616 2.4e-69 266.9 164 82.3
arahy.Tifrunner.gnm1.ann1.ARWK2P Arachis hypogaea HOM05D003848 ORTHO05D004616 3.1e-69 266.5 163 82.8
arahy.Tifrunner.gnm1.ann1.X3NAFX Arachis hypogaea HOM05D003848 ORTHO05D004616 3.1e-69 266.5 163 82.8
Glyma.02G146600 Glycine max HOM05D003848 ORTHO05D004616 3.1e-69 266.5 164 82.3
MD11G1283600 Malus domestica HOM05D003848 ORTHO05D004616 3.1e-69 266.5 155 87.1
Phvul.007G172800 Phaseolus vulgaris HOM05D003848 ORTHO05D004616 3.1e-69 266.5 164 82.3
Thecc.01G276600 Theobroma cacao HOM05D003848 ORTHO05D004616 3.1e-69 266.5 155 87.1
Ca_09749_v3 Cicer arietinum L. HOM05D003848 ORTHO05D004616 4.1e-69 266.2 154 87.0
PGR119G0967 Punica granatum HOM05D003848 ORTHO05D004616 4.1e-69 266.2 168 82.1
Gohir.A12G004500 Gossypium hirsutum HOM05D003848 ORTHO05D004616 5.3e-69 265.8 151 88.7
Gohir.D12G004200 Gossypium hirsutum HOM05D003848 ORTHO05D004616 5.3e-69 265.8 151 88.7
Gorai.008G004000 Gossypium raimondii HOM05D003848 ORTHO05D004616 5.3e-69 265.8 151 88.7
SHI27493 Sapria himalayana HOM05D004058 ORTHO05D001984 5.3e-69 265.8 156 85.9
GSVIVG01001165001 Vitis vinifera HOM05D003848 ORTHO05D004616 5.3e-69 265.8 159 84.9
TWI59G1147 Tripterygium wilfordii HOM05D003848 ORTHO05D004616 6.9e-69 265.4 155 86.5
Prupe.8G239200 Prunus persica HOM05D003848 ORTHO05D004616 9.1e-69 265.0 167 82.0
MD03G1262900 Malus domestica HOM05D003848 ORTHO05D004616 1.5e-68 264.2 155 86.5
CBR_g4136 Chara braunii HOM05D003848 ORTHO05D004616 2.6e-68 263.5 160 85.0
Hma1.2p1_0822F.1_g224390 Hydrangea macrophylla HOM05D003848 ORTHO05D004616 2.6e-68 263.5 164 79.9
MBI07_g03188_MAGBIO Magnolia biondii HOM05D003848 ORTHO05D004616 3.4e-68 263.1 155 85.2
Psat4g156760 Pisum sativum HOM05D003848 ORTHO05D004616 3.4e-68 263.1 154 87.0
THA.LOC104825995 Tarenaya hassleriana HOM05D003848 ORTHO05D004616 3.4e-68 263.1 154 88.3
CDE06G2067 Ceratophyllum demersum HOM05D003848 ORTHO05D004616 4.5e-68 262.7 165 80.0
Lalb_Chr06g0162931 Lupinus albus HOM05D003848 ORTHO05D004616 4.5e-68 262.7 161 82.6
Zm00001eb314820 Zea mays HOM05D003848 ORTHO05D004616 5.9e-68 262.3 157 86.0
Dinv32920 Davidia involucrata HOM05D003848 ORTHO05D004616 7.7e-68 261.9 159 83.0
Nn1g02285 Nelumbo nucifera HOM05D003848 ORTHO05D004616 1.3e-67 261.2 164 80.5
Medtr8g028640 Medicago truncatula HOM05D003848 ORTHO05D004616 2.9e-67 260.0 154 85.1
TAR633G0718 Trochodendron aralioides HOM05D003848 ORTHO05D004616 2.9e-67 260.0 165 81.8
vmacro18863 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 3.8e-67 259.6 154 85.1
Aqoxy2G03377 Aquilegia oxysepala HOM05D003848 ORTHO05D004616 5.0e-67 259.2 166 80.1
Nitab4.5_0005156g0010 Nicotiana tabacum HOM05D003848 ORTHO05D004616 6.5e-67 258.8 164 79.9
Nitab4.5_0006700g0010 Nicotiana tabacum HOM05D003848 ORTHO05D004616 6.5e-67 258.8 164 79.9
Actinidia24902 Actinidia chinensis HOM05D003848 ORTHO05D004616 1.1e-66 258.1 167 79.6
Cc00_g04130 Coffea canephora HOM05D003848 ORTHO05D004616 1.1e-66 258.1 164 79.3
Cc01_g10690 Coffea canephora HOM05D003848 ORTHO05D004616 1.1e-66 258.1 164 79.3
HanXRQChr01g0002971 Helianthus annuus HOM05D003848 ORTHO05D004616 1.1e-66 258.1 166 80.7
Lj1C175T4 Lonicera japonica HOM05D003848 ORTHO05D004616 1.4e-66 257.7 167 79.6
Lj2C1116T3 Lonicera japonica HOM05D003848 ORTHO05D004616 1.4e-66 257.7 167 79.6
Ah.02g110950 Amaranthus hybridus HOM05D003848 ORTHO05D004616 1.9e-66 257.3 164 82.3
MSTRG.21553 Avicennia marina HOM05D003848 ORTHO05D004616 1.9e-66 257.3 154 83.1
TAR369G1095 Trochodendron aralioides HOM05D003848 ORTHO05D004616 1.9e-66 257.3 165 81.2
SGA_v2.0_scaffold1G00491 Striga asiatica HOM05D003848 ORTHO05D004616 4.2e-66 256.1 154 83.8
Rhsim01G0273900 Rhododendron simsii HOM05D003848 ORTHO05D004616 5.5e-66 255.8 158 82.9
vmacro19513 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 9.4e-66 255.0 154 83.1
Aa31LG5G2360 Aethionema arabicum HOM05D003848 ORTHO05D004616 3.6e-65 253.1 161 81.4
Migut.D00312 Erythranthe guttata HOM05D003848 ORTHO05D004616 3.6e-65 253.1 154 83.8
unitig_0.g1040 Utricularia gibba HOM05D003848 ORTHO05D004616 4.7e-65 252.7 160 80.0
Carub.0006s3439 Capsella rubella HOM05D003848 ORTHO05D004616 6.1e-65 252.3 168 78.0
Oeu028073.1 Olea europaea HOM05D003848 ORTHO05D004616 6.1e-65 252.3 164 78.0
Oeu041715.2 Olea europaea HOM05D003848 ORTHO05D004616 2.3e-64 250.4 159 79.2
Sc24g0003320 Simmondsia chinensis HOM05D003848 ORTHO05D004616 2.3e-64 250.4 155 83.2
BcaB01g02014 Brassica carinata HOM05D003848 ORTHO05D004616 3.0e-64 250.0 164 77.4
AL6G50290 Arabidopsis lyrata HOM05D003848 ORTHO05D004616 3.9e-64 249.6 169 76.3
EL10Ac5g10556 Beta vulgaris HOM05D003848 ORTHO05D004616 3.9e-64 249.6 171 76.6
MELO3C009735.2 Cucumis melo HOM05D003848 ORTHO05D004616 3.9e-64 249.6 151 84.8
CsaV3_3G039920 Cucumis sativus L. HOM05D003848 ORTHO05D004616 3.9e-64 249.6 151 84.8
CAN.G439.4 Capsicum annuum HOM05D003848 ORTHO05D004616 6.7e-64 248.8 164 78.0
Sed0011367 Sechium edule HOM05D003848 ORTHO05D004616 6.7e-64 248.8 156 83.3
FAN22G0164 Fragaria x ananassa HOM05D003848 ORTHO05D004616 8.8e-64 248.4 150 84.7
AT4G02720 Arabidopsis thaliana HOM05D003848 ORTHO05D004616 1.1e-63 248.1 169 76.9
CARHR251050 Cardamine hirsuta HOM05D003848 ORTHO05D004616 1.1e-63 248.1 168 76.8
Lj5g0005692 Lotus japonicus HOM05D003848 ORTHO05D004616 1.5e-63 247.7 157 81.5
ClCG10G016420 Citrullus lanatus HOM05D003848 ORTHO05D004616 3.3e-63 246.5 151 84.1
ECA248G3600 Erigeron canadensis HOM05D003848 ORTHO05D004616 3.3e-63 246.5 154 81.2
BcaC01g01560 Brassica carinata HOM05D003848 ORTHO05D004616 4.4e-63 246.1 166 75.9
Lsat_1_v5_gn_5_184160 Lactuca sativa HOM05D003848 ORTHO05D004616 4.4e-63 246.1 159 79.2
Solyc11g071660.1 Solanum lycopersicum HOM05D003848 ORTHO05D004616 4.4e-63 246.1 167 77.2
Sopen11g029330 Solanum pennellii HOM05D003848 ORTHO05D004616 4.4e-63 246.1 167 77.2
PGSC0003DMG400046756 Solanum tuberosum HOM05D003848 ORTHO05D004616 4.4e-63 246.1 167 77.2
Thhalv10028691m.g Eutrema salsugineum HOM05D003848 ORTHO05D004616 5.7e-63 245.7 165 77.6
Manes.05G077600 Manihot esculenta HOM05D003848 ORTHO05D004616 9.7e-63 245.0 164 77.4
Sp6g02650 Schrenkiella parvula HOM05D003848 ORTHO05D004616 1.3e-62 244.6 165 77.0
C03p93080 Brassica napus HOM05D003848 ORTHO05D004616 1.7e-62 244.2 167 75.4
DCAR_000720 Daucus carota HOM05D003848 ORTHO05D004616 1.7e-62 244.2 155 81.9
AUR62017852 Chenopodium quinoa HOM05D003848 ORTHO05D004616 8.2e-62 241.9 163 77.9
AUR62003538 Chenopodium quinoa HOM05D003848 ORTHO05D004616 1.1e-61 241.5 163 77.9
Duzib177G1090 Durio zibethinus HOM05D003848 ORTHO05D004616 3.1e-61 240.0 151 80.1
Hund11854 Selenicereus undatus HOM05D003848 ORTHO05D004616 4.1e-61 239.6 154 81.2
Peaxi162Scf00217g00025 Petunia axillaris HOM05D003848 ORTHO05D004616 2.0e-60 237.3 146 84.2
Manes.01G206800 Manihot esculenta HOM05D003848 ORTHO05D004616 2.6e-60 236.9 163 76.7
BolC8t51344H Brassica oleracea HOM05D003848 ORTHO05D004616 2.2e-59 233.8 177 70.1
PSO210G3188 Papaver somniferum HOM05D003848 ORTHO05D004616 2.9e-59 233.4 165 75.8
PSO832G2619 Papaver somniferum HOM05D003848 ORTHO05D004616 3.8e-59 233.0 165 75.8
A09p02120 Brassica napus HOM05D003848 ORTHO05D004616 1.5e-58 231.1 135 83.7
BraA09t35861Z Brassica rapa HOM05D003848 ORTHO05D004616 1.5e-58 231.1 135 83.7
C03p93150 Brassica napus HOM05D003848 ORTHO05D004616 4.2e-58 229.6 155 76.1
C08p37610 Brassica napus HOM05D003848 ORTHO05D004616 4.2e-58 229.6 134 83.6
BolC9t53150H Brassica oleracea HOM05D003848 ORTHO05D004616 4.2e-58 229.6 134 83.6
BcaC01g01554 Brassica carinata HOM05D003848 ORTHO05D004616 7.2e-58 228.8 133 84.2
C09p02220 Brassica napus HOM05D003848 ORTHO05D004616 7.2e-58 228.8 160 74.4
BraA04t17534Z Brassica rapa HOM05D003848 ORTHO05D004616 1.6e-57 227.6 170 72.4
BolC3t21610H Brassica oleracea HOM05D003848 ORTHO05D004616 4.7e-57 226.1 126 87.3
C03p93070 Brassica napus HOM05D003848 ORTHO05D004616 6.1e-57 225.7 131 84.0
BcaC04g24009 Brassica carinata HOM05D003848 ORTHO05D004616 1.4e-56 224.6 134 82.1
C03p93100 Brassica napus HOM05D003848 ORTHO05D004616 1.8e-56 224.2 133 82.7
A09p54740 Brassica napus HOM05D003848 ORTHO05D004616 3.0e-56 223.4 129 84.5
BcaC01g01558 Brassica carinata HOM05D003848 ORTHO05D004616 6.7e-56 222.2 131 83.2
A04p19390 Brassica napus HOM05D003848 ORTHO05D004616 1.5e-55 221.1 170 70.0
C09p02210 Brassica napus HOM05D003848 ORTHO05D004616 2.0e-55 220.7 129 83.7
BcaC02g08380 Brassica carinata HOM05D003848 ORTHO05D004616 4.4e-55 219.5 160 74.4
A09p30470 Brassica napus HOM05D003848 ORTHO05D004616 7.5e-55 218.8 131 82.4
BolC3t21613H Brassica oleracea HOM05D003848 ORTHO05D004616 7.5e-55 218.8 133 80.5
C04p54970 Brassica napus HOM05D003848 ORTHO05D004616 4.8e-54 216.1 128 84.4
BolC4t27032H Brassica oleracea HOM05D003848 ORTHO05D004616 4.8e-54 216.1 128 84.4
BcaC01g01561 Brassica carinata HOM05D003848 ORTHO05D004616 1.1e-53 214.9 129 81.4
TPR.G23082 Trifolium pratense HOM05D003848 ORTHO05D004616 4.1e-53 213.0 131 81.7
QL03p072399 Quercus lobata HOM05D003848 ORTHO05D004616 2.6e-52 210.3 142 78.9
Rhsim10G0030500 Rhododendron simsii HOM05D003848 ORTHO05D004616 3.5e-52 209.9 133 82.0
CDE07G1463 Ceratophyllum demersum HOM05D003848 ORTHO05D004616 2.0e-47 194.1 164 64.0
Ca_04836_v3 Cicer arietinum L. HOM05D001515 ORTHO05D004616 3.8e-43 179.9 108 84.3
arahy.Tifrunner.gnm1.ann1.3GG3GM Arachis hypogaea HOM05D004461 ORTHO05D005543 9.4e-42 175.3 115 78.3
SalBow4G2167 Salvia bowleyana HOM05D003848 ORTHO05D004616 1.2e-41 174.9 154 61.7
C03p93140 Brassica napus HOM05D003848 ORTHO05D004616 1.6e-41 174.5 118 78.0
MCO02G035 Micromonas commoda HOM05D003848 ORTHO05D004616 1.0e-40 171.8 106 82.1
BcaC03g13677 Brassica carinata HOM05D003848 ORTHO05D004616 6.8e-40 169.1 131 69.5
SGA_v2.0_scaffold138G35328 Striga asiatica HOM05D003848 ORTHO05D004616 8.8e-40 168.7 154 60.4
Nn4g26302 Nelumbo nucifera HOM05D003848 ORTHO05D004616 1.2e-39 168.3 102 84.3
BcaC03g16168 Brassica carinata HOM05D003848 ORTHO05D004616 1.7e-38 164.5 103 77.7
PRCOL_00001828 Prasinoderma coloniale HOM05D003848 ORTHO05D004616 3.5e-36 156.8 110 70.9
Oeu017054.1 Olea europaea HOM05D004271 ORTHO05D006011 1.0e-35 155.2 116 72.4
Hma1.2p1_0667F.1_g199770 Hydrangea macrophylla HOM05D003848 ORTHO05D004616 7.2e-34 149.1 175 50.3
Cre01.g032250 Chlamydomonas reinhardtii HOM05D003848 ORTHO05D004616 2.8e-33 147.1 160 54.4
BraA09t40884Z Brassica rapa HOM05D003848 ORTHO05D004616 3.4e-31 140.2 84 81.0
BraA09t38617Z Brassica rapa HOM05D003848 ORTHO05D004616 7.5e-31 139.0 84 81.0
Os09g0455400 Oryza sativa ssp. japonica HOM05D003848 ORTHO05D004616 1.4e-29 134.8 72 91.7
Haze_27548 Corylus avellana HOM05D003848 ORTHO05D004616 5.4e-29 132.9 103 59.2
C02p39120 Brassica napus HOM05D003848 ORTHO05D004616 1.5e-26 124.8 84 72.6
BolC2t09922H Brassica oleracea HOM05D003848 ORTHO05D004616 4.3e-26 123.2 84 71.4
Actinidia21120 Actinidia chinensis HOM05D003848 ORTHO05D004616 2.6e-23 114.0 153 48.4
BNapus_Darmor_BZH_scaffold_38p02440 Brassica napus HOM05D003848 ORTHO05D004616 2.9e-22 110.5 68 79.4
FAN22G1718 Fragaria x ananassa HOM05D003848 ORTHO05D004616 2.9e-22 110.5 73 75.3
BNapus_Darmor_BZH_scaffold_38p02460 Brassica napus HOM05D003848 ORTHO05D004616 3.7e-22 110.2 65 83.1
unitig_0.g1042 Utricularia gibba HOM05D003848 ORTHO05D004616 7.0e-21 105.9 72 77.8
BolC2t06954H Brassica oleracea HOM05D003848 ORTHO05D004616 5.0e-19 99.8 68 75.0
MD07G1100600 Malus domestica HOM05D003848 ORTHO05D004616 5.0e-19 99.8 56 89.3
Ca_05843_v3 Cicer arietinum L. HOM05D003848 ORTHO05D004616 1.8e-16 91.3 45 95.6
vmacro19512 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 3.1e-16 90.5 154 40.3
Prupe.6G167600 Prunus persica HOM05D003848 ORTHO05D004616 4.0e-16 90.1 56 82.1


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