Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0050s0087 Marchantia polymorpha HOM05D034204 ORTHO05D005062 1.2e-96 356.7 196 100.0
Mapoly0031s0147 Marchantia polymorpha HOM05D034204 ORTHO05D005062 5.4e-86 321.2 196 93.4
CARHR045970 Cardamine hirsuta HOM05D004577 ORTHO05D005062 7.4e-11 71.6 100 57.0
BolC4t23212H Brassica oleracea HOM05D004577 ORTHO05D005062 1.4e-09 67.4 103 53.4
AT1G56200 Arabidopsis thaliana HOM05D004577 ORTHO05D005062 1.8e-09 67.0 100 55.0
AagrBONN_evm.TU.Sc2ySwM_228.3972 Anthoceros agrestis HOM05D004577 ORTHO05D005062 3.1e-09 66.2 95 55.8
A05p12690 Brassica napus HOM05D004577 ORTHO05D005062 4.1e-09 65.9 100 54.0
C04p16620 Brassica napus HOM05D004577 ORTHO05D005062 4.1e-09 65.9 100 54.0
AL1G64510 Arabidopsis lyrata HOM05D004577 ORTHO05D005062 5.3e-09 65.5 100 54.0
Carub.0001s4488 Capsella rubella HOM05D004577 ORTHO05D005062 5.3e-09 65.5 100 54.0
BcaB02g10507 Brassica carinata HOM05D004577 ORTHO05D005062 6.9e-09 65.1 100 54.0
BraA05t20207Z Brassica rapa HOM05D004577 ORTHO05D005062 6.9e-09 65.1 100 54.0
Thhalv10011850m.g Eutrema salsugineum HOM05D004577 ORTHO05D005062 6.9e-09 65.1 108 50.0
Gohir.D09G118900 Gossypium hirsutum HOM05D004577 ORTHO05D005062 9.1e-09 64.7 111 42.3
Solyc04g051850.3 Solanum lycopersicum HOM05D004577 ORTHO05D005062 1.2e-08 64.3 116 48.3
MSTRG.14503 Avicennia marina HOM05D004577 ORTHO05D005062 1.5e-08 63.9 119 47.9
Ciclev10009709m.g Citrus clementina HOM05D004577 ORTHO05D005062 1.5e-08 63.9 133 39.1
Sopen04g023180 Solanum pennellii HOM05D004577 ORTHO05D005062 1.5e-08 63.9 116 48.3
CSS0030856 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 2.0e-08 63.5 167 41.3
THA.LOC104826365 Tarenaya hassleriana HOM05D004577 ORTHO05D005062 2.0e-08 63.5 97 53.6
Sc22g0002120 Simmondsia chinensis HOM05D004577 ORTHO05D005062 3.4e-08 62.8 126 44.4
PGSC0003DMG400016552 Solanum tuberosum HOM05D004577 ORTHO05D005062 3.4e-08 62.8 116 47.4
TAR627G0729 Trochodendron aralioides HOM05D004577 ORTHO05D005062 3.4e-08 62.8 127 44.9
CSS0048553 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 4.5e-08 62.4 152 42.8
CSS0050514 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 4.5e-08 62.4 108 48.1
Duzib187G1448 Durio zibethinus HOM05D004577 ORTHO05D005062 4.5e-08 62.4 115 42.6
MBI15_g38535_MAGBIO Magnolia biondii HOM05D004577 ORTHO05D005062 4.5e-08 62.4 123 45.5
TAR629G1725 Trochodendron aralioides HOM05D004577 ORTHO05D005062 4.5e-08 62.4 128 45.3
PGSC0003DMG400014846 Solanum tuberosum HOM05D004577 ORTHO05D005062 7.7e-08 61.6 115 47.8
Duzib213G0774 Durio zibethinus HOM05D004577 ORTHO05D005062 1.0e-07 61.2 94 45.7
PSO541G2111 Papaver somniferum HOM05D004577 ORTHO05D005062 1.0e-07 61.2 93 53.8
PSO675G7851 Papaver somniferum HOM05D004577 ORTHO05D005062 1.0e-07 61.2 93 53.8
CDE01G0461 Ceratophyllum demersum HOM05D004577 ORTHO05D005062 1.3e-07 60.8 150 41.3
Peaxi162Scf00359g00123 Petunia axillaris HOM05D004577 ORTHO05D005062 1.7e-07 60.5 110 49.1
DCAR_015198 Daucus carota HOM05D004577 ORTHO05D005062 2.9e-07 59.7 105 49.5
Gohir.A01G038700 Gossypium hirsutum HOM05D004577 ORTHO05D005062 2.9e-07 59.7 97 42.3
MSTRG.13031 Avicennia marina HOM05D004577 ORTHO05D005062 3.8e-07 59.3 110 48.2
Thhalv10008915m.g Eutrema salsugineum HOM05D004577 ORTHO05D005062 3.8e-07 59.3 93 53.8
Thecc.07G153300 Theobroma cacao HOM05D004577 ORTHO05D005062 3.8e-07 59.3 114 41.2
ATR0681G062 Amborella trichopoda HOM05D004577 ORTHO05D005062 5.0e-07 58.9 138 42.8
BcaC01g00196 Brassica carinata HOM05D004577 ORTHO05D005062 5.0e-07 58.9 98 46.9
DCAR_019165 Daucus carota HOM05D004577 ORTHO05D005062 5.0e-07 58.9 104 49.0
Dinv40884 Davidia involucrata HOM05D002691 ORTHO05D003304 5.0e-07 58.9 80 61.2
Sp1g41840 Schrenkiella parvula HOM05D004577 ORTHO05D005062 5.0e-07 58.9 100 52.0
Sopen08g002020 Solanum pennellii HOM05D004577 ORTHO05D005062 5.0e-07 58.9 115 44.3
CSS0013049 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 6.5e-07 58.5 102 48.0
PGR004G1013 Punica granatum HOM05D004577 ORTHO05D005062 6.5e-07 58.5 129 45.0
HPP92_020499 Vanilla planifolia HOM05D004577 ORTHO05D005062 6.5e-07 58.5 87 57.5
Migut.M01633 Erythranthe guttata HOM05D004577 ORTHO05D005062 8.5e-07 58.2 132 43.2
Haze_09864 Corylus avellana HOM05D004577 ORTHO05D005062 1.4e-06 57.4 191 36.1
Pp3c1_35130 Physcomitrium patens HOM05D034204 ORTHO05D005062 1.4e-06 57.4 89 57.3
Potri.011G163900 Populus trichocarpa HOM05D004577 ORTHO05D005062 1.4e-06 57.4 98 50.0
TWI39G1131 Tripterygium wilfordii HOM05D004577 ORTHO05D005062 1.4e-06 57.4 84 53.6
unitig_578.g16418 Utricularia gibba HOM05D004577 ORTHO05D005062 1.4e-06 57.4 102 48.0
C03p76790 Brassica napus HOM05D004577 ORTHO05D005062 1.9e-06 57.0 97 47.4
Nn1g08321 Nelumbo nucifera HOM05D004577 ORTHO05D005062 1.9e-06 57.0 98 50.0
Sp1g26310 Schrenkiella parvula HOM05D004577 ORTHO05D005062 1.9e-06 57.0 93 47.3
Solyc08g006050.2 Solanum lycopersicum HOM05D004577 ORTHO05D005062 1.9e-06 57.0 115 46.1
AL1G44500 Arabidopsis lyrata HOM05D004577 ORTHO05D005062 2.5e-06 56.6 107 49.5
BolC3t19933H Brassica oleracea HOM05D004577 ORTHO05D005062 2.5e-06 56.6 98 46.9
ECA240G1529 Erigeron canadensis HOM05D000491 ORTHO05D000359 2.5e-06 56.6 80 57.5
Oeu021394.1 Olea europaea HOM05D004577 ORTHO05D005062 2.5e-06 56.6 99 52.5
BcaB03g13825 Brassica carinata HOM05D004577 ORTHO05D005062 3.2e-06 56.2 93 46.2
A07p09910 Brassica napus HOM05D004577 ORTHO05D005062 3.2e-06 56.2 93 46.2
Cfa021890 Carpinus fangiana HOM05D004577 ORTHO05D005062 3.2e-06 56.2 120 45.8
Cc10_g02580 Coffea canephora HOM05D004577 ORTHO05D005062 3.2e-06 56.2 95 51.6
C07p15110 Brassica napus HOM05D004577 ORTHO05D005062 5.5e-06 55.5 93 46.2
BolC7t42015H Brassica oleracea HOM05D004577 ORTHO05D005062 5.5e-06 55.5 93 46.2
CiPaw.11G206900 Carya illinoinensis HOM05D004577 ORTHO05D005062 5.5e-06 55.5 169 37.9
HanXRQChr13g0408461 Helianthus annuus HOM05D004577 ORTHO05D005062 5.5e-06 55.5 83 55.4
BcaNung05263 Brassica carinata HOM05D004577 ORTHO05D005062 7.2e-06 55.1 135 37.0
Manes.05G118000 Manihot esculenta HOM05D004577 ORTHO05D005062 7.2e-06 55.1 116 40.5
HanXRQChr03g0080381 Helianthus annuus HOM05D004577 ORTHO05D005062 9.4e-06 54.7 80 56.2
MBI07_g28243_MAGBIO Magnolia biondii HOM05D004577 ORTHO05D005062 9.4e-06 54.7 97 46.4


User provided reference genes

Program Settings