Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0050s0018 Marchantia polymorpha HOM05D006082 ORTHO05D007616 4.0e-151 538.1 277 100.0
Pp3c10_9330 Physcomitrium patens HOM05D006082 ORTHO05D007616 1.8e-55 220.3 224 50.9
SEGI_04405 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 7.4e-41 171.8 223 39.0
CBR_g1036 Chara braunii HOM05D006082 ORTHO05D007616 1.3e-40 171.0 259 38.6
ATR1136G056 Amborella trichopoda HOM05D006082 ORTHO05D007616 1.5e-33 147.5 218 38.5
HanXRQChr14g0454421 Helianthus annuus HOM05D006082 ORTHO05D007616 7.5e-33 145.2 200 41.0
TAR375G0813 Trochodendron aralioides HOM05D006082 ORTHO05D007616 9.7e-33 144.8 200 40.0
Cc03_g11310 Coffea canephora HOM05D006082 ORTHO05D007616 4.8e-32 142.5 203 39.4
MSTRG.15681 Avicennia marina HOM05D006082 ORTHO05D007616 1.4e-31 141.0 214 39.7
CANSAT56G1086 Cannabis sativa HOM05D006082 ORTHO05D007616 3.1e-31 139.8 200 42.5
THA.LOC104815904 Tarenaya hassleriana HOM05D006082 ORTHO05D007616 3.1e-31 139.8 195 40.5
ECA238G2330 Erigeron canadensis HOM05D006082 ORTHO05D007616 5.3e-31 139.0 207 40.1
PGSC0003DMG400016241 Solanum tuberosum HOM05D006082 ORTHO05D007616 7.0e-31 138.7 211 40.8
Migut.L00265 Erythranthe guttata HOM05D006082 ORTHO05D007616 1.6e-30 137.5 230 37.0
CAN.G691.19 Capsicum annuum HOM05D006082 ORTHO05D007616 2.0e-30 137.1 208 40.9
Solyc11g008790.3 Solanum lycopersicum HOM05D006082 ORTHO05D007616 2.0e-30 137.1 211 40.8
Sopen11g004570 Solanum pennellii HOM05D006082 ORTHO05D007616 2.0e-30 137.1 211 40.8
Gohir.A11G102200 Gossypium hirsutum HOM05D006082 ORTHO05D007616 2.7e-30 136.7 198 39.9
Potri.014G107300 Populus trichocarpa HOM05D006082 ORTHO05D007616 2.7e-30 136.7 210 38.6
GSVIVG01027464001 Vitis vinifera HOM05D006082 ORTHO05D007616 2.7e-30 136.7 210 39.0
Carub.0001s0120 Capsella rubella HOM05D006082 ORTHO05D007616 3.5e-30 136.3 228 37.3
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 3.5e-30 136.3 200 40.5
Gorai.007G114300 Gossypium raimondii HOM05D006082 ORTHO05D007616 7.7e-30 135.2 198 39.4
Ciclev10022037m.g Citrus clementina HOM05D006082 ORTHO05D007616 1.0e-29 134.8 200 40.5
AagrBONN_evm.TU.Sc2ySwM_340.22 Anthoceros agrestis HOM05D006082 ORTHO05D007616 1.3e-29 134.4 220 37.7
BcaB03g13546 Brassica carinata HOM05D006082 ORTHO05D007616 1.7e-29 134.0 195 39.5
C05p00920 Brassica napus HOM05D006082 ORTHO05D007616 1.7e-29 134.0 199 38.2
BolC5t28877H Brassica oleracea HOM05D006082 ORTHO05D007616 1.7e-29 134.0 199 38.2
CARHR001490 Cardamine hirsuta HOM05D006082 ORTHO05D007616 5.0e-29 132.5 197 39.6
BraA10t42369Z Brassica rapa HOM05D006082 ORTHO05D007616 8.5e-29 131.7 195 37.9
PSO675G6921 Papaver somniferum HOM05D006082 ORTHO05D007616 8.5e-29 131.7 195 34.4
TPR.G16094 Trifolium pratense HOM05D006082 ORTHO05D007616 8.5e-29 131.7 203 37.4
CDE08G0270 Ceratophyllum demersum HOM05D006082 ORTHO05D007616 1.1e-28 131.3 222 34.2
ClCG05G000050 Citrullus lanatus HOM05D006082 ORTHO05D007616 1.1e-28 131.3 206 39.3
PSO675G6409 Papaver somniferum HOM05D006082 ORTHO05D007616 1.1e-28 131.3 196 35.2
Sp1g01290 Schrenkiella parvula HOM05D006082 ORTHO05D007616 1.1e-28 131.3 197 39.1
Sp6g01450 Schrenkiella parvula HOM05D006082 ORTHO05D007616 1.1e-28 131.3 208 37.5
A10p00890 Brassica napus HOM05D006082 ORTHO05D007616 1.5e-28 131.0 195 37.9
HPP92_015681 Vanilla planifolia HOM05D006082 ORTHO05D007616 1.5e-28 131.0 197 38.6
Aa31LG1G10340 Aethionema arabicum HOM05D006082 ORTHO05D007616 1.9e-28 130.6 199 39.7
Thhalv10028930m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 1.9e-28 130.6 206 37.9
Duzib133G0864 Durio zibethinus HOM05D006082 ORTHO05D007616 2.5e-28 130.2 200 38.5
AL6G51830 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 3.2e-28 129.8 199 39.2
Actinidia33031 Actinidia chinensis HOM05D006082 ORTHO05D007616 4.2e-28 129.4 211 37.4
Psat3g079600 Pisum sativum HOM05D006082 ORTHO05D007616 4.2e-28 129.4 203 36.5
QL01p017595 Quercus lobata HOM05D006082 ORTHO05D007616 5.5e-28 129.0 201 39.8
AL1G11510 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 7.2e-28 128.6 197 38.6
Carub.0006s3568 Capsella rubella HOM05D006082 ORTHO05D007616 7.2e-28 128.6 199 40.7
AUR62016743 Chenopodium quinoa HOM05D006082 ORTHO05D007616 7.2e-28 128.6 196 37.8
Os03g0784300 Oryza sativa ssp. japonica HOM05D006082 ORTHO05D007616 7.2e-28 128.6 201 37.3
Thecc.01G331100 Theobroma cacao HOM05D006082 ORTHO05D007616 9.4e-28 128.3 202 37.6
TWI14G1025 Tripterygium wilfordii HOM05D006082 ORTHO05D007616 1.2e-27 127.9 199 39.7
Atru.chr5.795 Acer truncatum HOM05D006082 ORTHO05D007616 2.1e-27 127.1 211 37.4
MD01G1091900 Malus domestica HOM05D006082 ORTHO05D007616 2.1e-27 127.1 221 37.1
Prupe.2G201100 Prunus persica HOM05D006082 ORTHO05D007616 2.1e-27 127.1 221 37.1
A09p01070 Brassica napus HOM05D006082 ORTHO05D007616 2.7e-27 126.7 210 37.6
C09p01160 Brassica napus HOM05D006082 ORTHO05D007616 2.7e-27 126.7 210 38.6
Ah.01g019340 Amaranthus hybridus HOM05D006082 ORTHO05D007616 4.7e-27 125.9 196 37.8
CARHR250170 Cardamine hirsuta HOM05D006082 ORTHO05D007616 4.7e-27 125.9 209 36.8
MELO3C005932.2 Cucumis melo HOM05D006082 ORTHO05D007616 6.1e-27 125.6 223 36.8
Aqoxy5G00354 Aquilegia oxysepala HOM05D006082 ORTHO05D007616 8.0e-27 125.2 225 34.2
PGR031G0479 Punica granatum HOM05D006082 ORTHO05D007616 1.4e-26 124.4 206 37.4
CsaV3_3G007110 Cucumis sativus L. HOM05D006082 ORTHO05D007616 1.8e-26 124.0 197 37.1
FAN06G3489 Fragaria x ananassa HOM05D006082 ORTHO05D007616 3.0e-26 123.2 220 35.9
Lj1g0004702 Lotus japonicus HOM05D006082 ORTHO05D007616 3.0e-26 123.2 199 34.7
Medtr7g089460 Medicago truncatula HOM05D006082 ORTHO05D007616 4.0e-26 122.9 203 35.0
CANSAT56G0035 Cannabis sativa HOM05D006082 ORTHO05D007616 5.2e-26 122.5 205 38.5
SEGI_20928 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 5.2e-26 122.5 154 37.7
AT4G01510 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 6.8e-26 122.1 198 37.9
arahy.Tifrunner.gnm1.ann1.6SRZ86 Arachis hypogaea HOM05D006082 ORTHO05D007616 6.8e-26 122.1 218 35.3
Haze_15761 Corylus avellana HOM05D006082 ORTHO05D007616 6.8e-26 122.1 226 35.8
Nn1g00467 Nelumbo nucifera HOM05D006082 ORTHO05D007616 6.8e-26 122.1 200 36.0
FvH4_7g17940 Fragaria vesca HOM05D006082 ORTHO05D007616 8.8e-26 121.7 220 35.5
Ca_08380_v3 Cicer arietinum L. HOM05D006082 ORTHO05D007616 1.2e-25 121.3 197 36.0
Eucgr.G03261 Eucalyptus grandis HOM05D006082 ORTHO05D007616 1.2e-25 121.3 226 35.4
Thhalv10008618m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 1.2e-25 121.3 197 37.6
Phvul.001G121700 Phaseolus vulgaris HOM05D006082 ORTHO05D007616 2.6e-25 120.2 199 36.2
RcHm_v2.0_Chr1g0361381 Rosa chinensis HOM05D006082 ORTHO05D007616 2.6e-25 120.2 222 36.0
arahy.Tifrunner.gnm1.ann1.9R6DDK Arachis hypogaea HOM05D006082 ORTHO05D007616 3.4e-25 119.8 199 35.7
Lalb_Chr17g0343121 Lupinus albus HOM05D006082 ORTHO05D007616 3.4e-25 119.8 226 32.3
FAN03G2817 Fragaria x ananassa HOM05D006082 ORTHO05D007616 5.7e-25 119.0 228 35.5
Dinv04258 Davidia involucrata HOM05D006082 ORTHO05D007616 9.8e-25 118.2 226 35.8
FAN06G1515 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.7e-24 117.5 226 35.0
SMO367G0224 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 2.2e-24 117.1 201 36.3
Glyma.03G126300 Glycine max HOM05D006082 ORTHO05D007616 2.8e-24 116.7 196 34.7
Glyma.19G129400 Glycine max HOM05D006082 ORTHO05D007616 8.3e-24 115.2 199 34.7
Manes.05G014900 Manihot esculenta HOM05D006082 ORTHO05D007616 3.1e-23 113.2 172 36.6
BraA09t35778Z Brassica rapa HOM05D006082 ORTHO05D007616 9.1e-23 111.7 238 33.2
BolC9t53049H Brassica oleracea HOM05D006082 ORTHO05D007616 1.2e-22 111.3 239 33.9
Aa31LG5G1260 Aethionema arabicum HOM05D006082 ORTHO05D007616 2.7e-22 110.2 206 36.4
Sc24g0001860 Simmondsia chinensis HOM05D006082 ORTHO05D007616 2.7e-22 110.2 205 35.6
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 1.6e-19 100.9 168 37.5
MBI06_g35217_MAGBIO Magnolia biondii HOM05D006082 ORTHO05D007616 1.6e-19 100.9 213 33.3
COL.COLO4_23067 Corchorus olitorius HOM05D006082 ORTHO05D007616 6.1e-19 99.0 139 37.4
FAN10G2982 Fragaria x ananassa HOM05D006082 ORTHO05D007616 8.0e-19 98.6 233 31.3
Migut.L00585 Erythranthe guttata HOM05D006082 ORTHO05D007616 1.0e-18 98.2 98 42.9
Lsat_1_v5_gn_2_88861 Lactuca sativa HOM05D006082 ORTHO05D007616 1.4e-18 97.8 180 33.9
Nitab4.5_0000743g0220 Nicotiana tabacum HOM05D006082 ORTHO05D007616 6.8e-18 95.5 210 35.2
Zm00001eb059810 Zea mays HOM05D006082 ORTHO05D007616 3.4e-17 93.2 169 33.1
Gohir.D11G106800 Gossypium hirsutum HOM05D006082 ORTHO05D007616 9.8e-17 91.7 198 31.8
vmacro11192 Vaccinium macrocarpon HOM05D006082 ORTHO05D007616 2.0e-14 84.0 285 26.3
Hma1.2p1_0262F.1_g105255 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 2.7e-14 83.6 61 54.1
Hma1.2p1_0451F.1_g155790 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 2.7e-14 83.6 61 54.1
DCAR_014739 Daucus carota HOM05D006082 ORTHO05D007616 2.3e-13 80.5 76 47.4
FAN01G2730 Fragaria x ananassa HOM05D006082 ORTHO05D007616 6.6e-13 79.0 237 30.8
AT1G01020 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 8.6e-13 78.6 157 34.4
C05p00960 Brassica napus HOM05D006082 ORTHO05D007616 1.9e-12 77.4 262 28.2
Peaxi162Scf00090g00046 Petunia axillaris HOM05D006082 ORTHO05D007616 1.9e-12 77.4 245 31.8
CiPaw.01G087100 Carya illinoinensis HOM05D006082 ORTHO05D007616 3.3e-12 76.6 160 36.9
Potri.002G181700 Populus trichocarpa HOM05D006082 ORTHO05D007616 1.6e-11 74.3 195 30.8
CSS0012451 Camellia sinensis var. sinensis HOM05D006082 ORTHO05D007616 6.1e-11 72.4 172 33.1
SMO230G0051 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 1.2e-09 68.2 168 32.1
BolC5t28880H Brassica oleracea HOM05D006082 ORTHO05D007616 4.4e-09 66.2 262 27.1
MD07G1162500 Malus domestica HOM05D006082 ORTHO05D007616 1.3e-08 64.7 87 36.8
Nitab4.5_0001677g0060 Nicotiana tabacum HOM05D006082 ORTHO05D007616 4.1e-07 59.7 261 26.1


User provided reference genes

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