Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0050s0001 Marchantia polymorpha HOM05D004813 ORTHO05D005889 1.4e-38 162.5 83 100.0
Mapoly0077s0037 Marchantia polymorpha HOM05D004813 ORTHO05D005889 5.7e-21 104.0 98 63.3
Hund02755 Selenicereus undatus HOM05D004813 ORTHO05D005889 1.8e-11 72.4 99 44.4
AUR62010096 Chenopodium quinoa HOM05D004813 ORTHO05D005889 2.7e-10 68.6 99 42.4
AUR62013092 Chenopodium quinoa HOM05D004813 ORTHO05D005889 2.7e-10 68.6 99 42.4
SGA_v2.0_scaffold114G31819 Striga asiatica HOM05D004813 ORTHO05D005889 4.5e-10 67.8 67 56.7
CSS0009747 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 1.3e-09 66.2 67 55.2
CSS0044871 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 1.3e-09 66.2 67 55.2
Aqoxy3G02883 Aquilegia oxysepala HOM05D004813 ORTHO05D005889 1.7e-09 65.9 100 41.0
CANSAT80G1068 Cannabis sativa HOM05D004813 ORTHO05D005889 1.7e-09 65.9 67 55.2
CDE05G0644 Ceratophyllum demersum HOM05D004813 ORTHO05D005889 1.7e-09 65.9 100 42.0
Pp3c4_31210 Physcomitrium patens HOM05D004813 ORTHO05D005889 1.7e-09 65.9 67 53.7
QL10p010983 Quercus lobata HOM05D004813 ORTHO05D005889 1.7e-09 65.9 67 55.2
Solyc03g112820.4 Solanum lycopersicum HOM05D004813 ORTHO05D005889 1.7e-09 65.9 67 55.2
Sopen03g031900 Solanum pennellii HOM05D004813 ORTHO05D005889 1.7e-09 65.9 67 55.2
PGSC0003DMG400018096 Solanum tuberosum HOM05D004813 ORTHO05D005889 1.7e-09 65.9 67 55.2
MBI16_g37492_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 2.2e-09 65.5 99 41.4
MBI16_g39216_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 2.2e-09 65.5 99 41.4
Peaxi162Scf00089g01844 Petunia axillaris HOM05D004813 ORTHO05D005889 2.2e-09 65.5 67 55.2
Glyma.17G088200 Glycine max HOM05D004813 ORTHO05D005889 2.9e-09 65.1 67 53.7
Lj9A420T39 Lonicera japonica HOM05D004813 ORTHO05D005889 2.9e-09 65.1 67 55.2
Nn4g22713 Nelumbo nucifera HOM05D004813 ORTHO05D005889 2.9e-09 65.1 67 55.2
Phvul.003G201700 Phaseolus vulgaris HOM05D004813 ORTHO05D005889 2.9e-09 65.1 67 53.7
Actinidia19106 Actinidia chinensis HOM05D004813 ORTHO05D005889 3.8e-09 64.7 67 53.7
C07p25370 Brassica napus HOM05D004813 ORTHO05D005889 3.8e-09 64.7 75 46.7
Gohir.D12G275800 Gossypium hirsutum HOM05D004813 ORTHO05D005889 3.8e-09 64.7 100 40.0
Gorai.008G296300 Gossypium raimondii HOM05D004813 ORTHO05D005889 3.8e-09 64.7 100 40.0
MBI17_g17505_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 3.8e-09 64.7 99 41.4
MD01G1006000 Malus domestica HOM05D004813 ORTHO05D005889 3.8e-09 64.7 67 55.2
MD06G1172400 Malus domestica HOM05D004813 ORTHO05D005889 3.8e-09 64.7 67 55.2
MD14G1178200 Malus domestica HOM05D004813 ORTHO05D005889 3.8e-09 64.7 67 55.2
Os11g0137100 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 3.8e-09 64.7 99 41.4
Potri.012G082600 Populus trichocarpa HOM05D004813 ORTHO05D005889 3.8e-09 64.7 67 53.7
Potri.015G078500 Populus trichocarpa HOM05D004813 ORTHO05D005889 3.8e-09 64.7 67 52.2
Sabra15G0103000 Salix brachista HOM05D004813 ORTHO05D005889 3.8e-09 64.7 67 53.7
Ciclev10019513m.g Citrus clementina HOM05D004813 ORTHO05D005889 5.0e-09 64.3 100 42.0
Cc04_g12130 Coffea canephora HOM05D004813 ORTHO05D005889 5.0e-09 64.3 67 53.7
Glyma.05G038800 Glycine max HOM05D004813 ORTHO05D005889 5.0e-09 64.3 67 53.7
Nitab4.5_0000514g0060 Nicotiana tabacum HOM05D004813 ORTHO05D005889 5.0e-09 64.3 67 55.2
SEGI_16864 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 5.0e-09 64.3 65 55.4
Nitab4.5_0008678g0020 Nicotiana tabacum HOM05D004813 ORTHO05D005889 6.5e-09 63.9 67 55.2
PGR044G0958 Punica granatum HOM05D004813 ORTHO05D005889 6.5e-09 63.9 67 53.7
Thecc.03G014500 Theobroma cacao HOM05D004813 ORTHO05D005889 6.5e-09 63.9 100 40.0
arahy.Tifrunner.gnm1.ann1.9LWV25 Arachis hypogaea HOM05D004813 ORTHO05D005889 8.5e-09 63.5 58 60.3
arahy.Tifrunner.gnm1.ann1.J26J1M Arachis hypogaea HOM05D004813 ORTHO05D005889 8.5e-09 63.5 58 60.3
Thhalv10003981m.g Eutrema salsugineum HOM05D004813 ORTHO05D005889 8.5e-09 63.5 100 38.0
Os12g0133900 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 8.5e-09 63.5 99 40.4
Prupe.5G171700 Prunus persica HOM05D004813 ORTHO05D005889 8.5e-09 63.5 67 53.7
Rhsim12G0165800 Rhododendron simsii HOM05D004813 ORTHO05D005889 8.5e-09 63.5 67 53.7
VMungo1215G0389 Vigna mungo HOM05D004813 ORTHO05D005889 8.5e-09 63.5 67 52.2
AagrBONN_evm.TU.Sc2ySwM_369.357 Anthoceros agrestis HOM05D004813 ORTHO05D005889 1.1e-08 63.2 58 53.4
BcaB02g10019 Brassica carinata HOM05D004813 ORTHO05D005889 1.1e-08 63.2 100 38.0
Cpa.g.sc76.31 Carica papaya HOM05D004813 ORTHO05D005889 1.1e-08 63.2 67 52.2
Dinv20637 Davidia involucrata HOM05D004813 ORTHO05D005889 1.1e-08 63.2 67 50.7
Lj4g0001275 Lotus japonicus HOM05D004813 ORTHO05D005889 1.1e-08 63.2 67 55.2
Manes.14G064300 Manihot esculenta HOM05D004813 ORTHO05D005889 1.1e-08 63.2 67 53.7
PSO063G0570 Papaver somniferum HOM05D004813 ORTHO05D005889 1.1e-08 63.2 67 52.2
PSO832G2178 Papaver somniferum HOM05D004813 ORTHO05D005889 1.1e-08 63.2 67 52.2
SalBow6G0518 Salvia bowleyana HOM05D004813 ORTHO05D005889 1.1e-08 63.2 58 56.9
TWI14G0980 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 1.1e-08 63.2 67 52.2
TWI23G0210 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 1.1e-08 63.2 67 53.7
Zm00001eb293550 Zea mays HOM05D004813 ORTHO05D005889 1.1e-08 63.2 99 42.4
A07p17440 Brassica napus HOM05D004813 ORTHO05D005889 1.5e-08 62.8 100 38.0
DCAR_031351 Daucus carota HOM05D004813 ORTHO05D005889 1.5e-08 62.8 67 53.7
Migut.D01957 Erythranthe guttata HOM05D004813 ORTHO05D005889 1.5e-08 62.8 58 56.9
Gohir.A12G275100 Gossypium hirsutum HOM05D004813 ORTHO05D005889 1.5e-08 62.8 67 50.7
HanXRQChr15g0463041 Helianthus annuus HOM05D004813 ORTHO05D005889 1.5e-08 62.8 67 52.2
Lsat_1_v5_gn_4_75841 Lactuca sativa HOM05D004813 ORTHO05D005889 1.5e-08 62.8 67 52.2
TAR629G2765 Trochodendron aralioides HOM05D004813 ORTHO05D005889 1.5e-08 62.8 67 52.2
HPP92_018752 Vanilla planifolia HOM05D004813 ORTHO05D005889 1.5e-08 62.8 99 40.4
EL10Ac9g21440 Beta vulgaris HOM05D004813 ORTHO05D005889 1.9e-08 62.4 99 39.4
BcaNung05723 Brassica carinata HOM05D004813 ORTHO05D005889 1.9e-08 62.4 98 38.8
CAN.G1166.5 Capsicum annuum HOM05D004813 ORTHO05D005889 1.9e-08 62.4 67 49.3
Cfa019150 Carpinus fangiana HOM05D004813 ORTHO05D005889 1.9e-08 62.4 67 52.2
CiPaw.11G024600 Carya illinoinensis HOM05D004813 ORTHO05D005889 1.9e-08 62.4 67 52.2
Haze_07517 Corylus avellana HOM05D004813 ORTHO05D005889 1.9e-08 62.4 67 52.2
Aa31LG1G15060 Aethionema arabicum HOM05D004813 ORTHO05D005889 2.5e-08 62.0 67 49.3
BcaC04g23133 Brassica carinata HOM05D004813 ORTHO05D005889 2.5e-08 62.0 98 38.8
BolC9t54072H Brassica oleracea HOM05D004813 ORTHO05D005889 2.5e-08 62.0 98 38.8
FvH4_5g05471 Fragaria vesca HOM05D004813 ORTHO05D005889 2.5e-08 62.0 67 52.2
FAN04G1884 Fragaria x ananassa HOM05D004813 ORTHO05D005889 2.5e-08 62.0 67 52.2
FAN08G2504 Fragaria x ananassa HOM05D004813 ORTHO05D005889 2.5e-08 62.0 67 52.2
FAN13G1879 Fragaria x ananassa HOM05D004813 ORTHO05D005889 2.5e-08 62.0 67 52.2
FAN18G0441 Fragaria x ananassa HOM05D004813 ORTHO05D005889 2.5e-08 62.0 67 52.2
FAN18G4177 Fragaria x ananassa HOM05D004813 ORTHO05D005889 2.5e-08 62.0 67 52.2
GSVIVG01007723001 Vitis vinifera HOM05D004813 ORTHO05D005889 2.5e-08 62.0 67 52.2
Atru.chr9.2495 Acer truncatum HOM05D004813 ORTHO05D005889 3.2e-08 61.6 67 50.7
COL.COLO4_30069 Corchorus olitorius HOM05D004813 ORTHO05D005889 3.2e-08 61.6 67 52.2
Oeu016404.1 Olea europaea HOM05D004813 ORTHO05D005889 3.2e-08 61.6 67 52.2
Atru.chr8.1447 Acer truncatum HOM05D004813 ORTHO05D005889 4.2e-08 61.2 67 50.7
Lalb_Chr07g0182801 Lupinus albus HOM05D004813 ORTHO05D005889 4.2e-08 61.2 67 50.7
vmacro16622 Vaccinium macrocarpon HOM05D004813 ORTHO05D005889 4.2e-08 61.2 67 50.7
C09p11820 Brassica napus HOM05D004813 ORTHO05D005889 5.5e-08 60.8 98 38.8
Carub.0002s0981 Capsella rubella HOM05D004813 ORTHO05D005889 5.5e-08 60.8 98 37.8
Ca_21934_v3 Cicer arietinum L. HOM05D004813 ORTHO05D005889 5.5e-08 60.8 67 52.2
Medtr4g105590 Medicago truncatula HOM05D004813 ORTHO05D005889 5.5e-08 60.8 67 52.2
RcHm_v2.0_Chr7g0193361 Rosa chinensis HOM05D004813 ORTHO05D005889 5.5e-08 60.8 67 52.2
A09p09960 Brassica napus HOM05D004813 ORTHO05D005889 7.2e-08 60.5 97 38.1
BraA09t36642Z Brassica rapa HOM05D004813 ORTHO05D005889 7.2e-08 60.5 97 38.1
ECA232G2493 Erigeron canadensis HOM05D004813 ORTHO05D005889 7.2e-08 60.5 67 49.3
TPR.G37503 Trifolium pratense HOM05D004813 ORTHO05D005889 7.2e-08 60.5 67 52.2
Sc04g0001740 Simmondsia chinensis HOM05D004813 ORTHO05D005889 9.4e-08 60.1 67 47.8
Eucgr.K02829 Eucalyptus grandis HOM05D004813 ORTHO05D005889 1.2e-07 59.7 56 57.1
Psat4g058360 Pisum sativum HOM05D004813 ORTHO05D005889 1.2e-07 59.7 67 52.2
Sp2g30180 Schrenkiella parvula HOM05D004813 ORTHO05D005889 1.2e-07 59.7 96 38.5
Oeu020911.1 Olea europaea HOM05D004813 ORTHO05D005889 1.6e-07 59.3 57 57.9
CARHR281210 Cardamine hirsuta HOM05D004813 ORTHO05D005889 2.1e-07 58.9 100 35.0
ATR1091G095 Amborella trichopoda HOM05D004813 ORTHO05D005889 2.7e-07 58.5 67 47.8
SMO275G0031 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 2.7e-07 58.5 100 42.0
SMO367G0656 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 2.7e-07 58.5 100 42.0
MELO3C026213.2 Cucumis melo HOM05D004813 ORTHO05D005889 3.6e-07 58.2 100 36.0
BolC7t43059H Brassica oleracea HOM05D004813 ORTHO05D005889 4.7e-07 57.8 63 47.6
Sed0018710 Sechium edule HOM05D004813 ORTHO05D005889 4.7e-07 57.8 67 47.8
ClCG06G017810 Citrullus lanatus HOM05D004813 ORTHO05D005889 6.1e-07 57.4 67 47.8
CsaV3_1G000640 Cucumis sativus L. HOM05D004813 ORTHO05D005889 6.1e-07 57.4 67 47.8
unitig_0.g15 Utricularia gibba HOM05D004813 ORTHO05D005889 8.0e-07 57.0 58 50.0
AL8G44980 Arabidopsis lyrata HOM05D004813 ORTHO05D005889 1.8e-06 55.8 98 37.8
Carub.0008s2799 Capsella rubella HOM05D004813 ORTHO05D005889 2.3e-06 55.5 96 35.4
Haze_20617 Corylus avellana HOM05D004813 ORTHO05D005889 2.3e-06 55.5 76 44.7


User provided reference genes

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